| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625492
Identifier: 116625492
GI number: 116625492
Start: 8064500
End: 8066764
Strand: Reverse
Name: 116625492
Synonym: Acid_6438
Alternate gene names: NA
Gene position: 8066764-8064500 (Counterclockwise)
Preceding gene: 116625494
Following gene: 116625491
Centisome position: 80.95
GC content: 62.43
Gene sequence:
>2265_bases GTGGACTTCATGTTCGAATTCCTGTTCAAATATCCGGCTAACATCTTCCATAAGGGCCAGTTCGTCCTCCTGACGCCGTG GCCTGTTTGGGTGTTGGCGTTCGCCATTCTCATCGCCGCCGGCGCCCTCTTCTGGCACGTCCGGCGCAATCACGGAATGC TCAGCGGGGCTCGGCCAATCGCCATCTGGCTGCTGGAAAGCGGCCTCATTGCGCTGATTCTCTTCCTCCTATGGCACCCG GCCTTGAGCATCGCCACCCTCAAGCCCCAACAGAACGTGGTGGCCGTCCTGGTGGACGATTCGCGCAGCATGGCGATCAA CGACAACTCGGGAACCCGCGAAGCGGCCGCGCAGGCGGCGCTCAACTCCGGACTGCTCAAGGGCCTCACCGACAAGTTTC AAGTCAGACTTTACAAGTTCGGCAAAGACCCCGAGCGCATCCAGAAAGCCGATCAACTGACGGCCGCGGCGCCGGCCACC CGCATCGGCGATACCCTGGAACGCGTCCTTGCGGAAAGCTCGAGCCTGCCCCTGGGCGCGATCGTGCTCTTGAGCGACGG CGCGGATAACGCGGGCGGCATCGATCTCGCGACCATCGCGGCCATCCGGCGGCAGCGCATTCCCATCCACACTGTGGGCT TCGGCAAGGAGCACCCGGACCGCGACATCGAAATCACCGACGCCGTGACCCCCGCGAGGGCGCTCCCCGATTCCAAGCTG ACCGCGACCGTGACCCTGCAAAGCTGGGGACTCTCCGGCAGCAAAGCGAAGTTGAACGTCAAGGAGAGCGGCAAGGTCCT TACGTCGCAGGAAATCGTATTAAAGGATAGCGGGCAGTTGCAGTCGGAGACCCTGGTCTTTAACGGCGGCCAGGCGGGTC CCAAGACCTTCGAGATCTCGGTGGACCCGGTCCAGGGCGAAGAAAATCAGCTGAACAACAAGATCACGCGCGTCGTCAAC GTGGAAAAACGCCGTCCGCGCATCCTCTATATACAGGGTGAGCCGGTATGGGAATTCAAGTTCATCCGCCGCGCGATCGA TGACTACCCCGATATCGGCATCGACCTGCCCACCATGCTGCGCACCACCCAGAACAAGATCTACCGGCAGGGCGGCAGCA GTCCCAAGGAACTCGAGGACGGCTTCCCCACCAAGCCCGAGGAACTGTTTGCCTACCAGGGCCTGATCATCGGCGGCGTG GAGGCCAGCTATTTCACCCCCGCGCAGCAACAAGCCATCAAGGACTTTGTGGACCGGCGCGGCGGCGGCGTTCTGTTCAT CGCCGGGCGCGCGAGCTTGAGCGATGGCGGCTGGCAGAATTCGCCGATGGCCGACCTGATCCCGGTCAAGCTGCCCGATT CGCGCGGCACCTTTCATCGCGATTTCTCCAGCGTGACGTTGACGCCGCAGGGCGCTCAGAGCATCCTCTGCCGGCTGGAT GAGAATCCGGCGCGCAACCTGGAGCGCTGGAAAAAGATCCCGCAGATCGCCAACTATCAGGATGTGGGCGACCCCAAGCC CGGAGCCACCACGCTGCTTCAAGTGACCACCCCCGCCAAGCGGGTGCAGCCCCTGCTGGTGACCGAGAACTTCGGCCGCG GCCGCACCGTGCTCTTCGCGACCGAGGGCAGTTGGCGCTGGAAGATGTGGCTGGACCACGCCGACAAAACACACCCCACC TTCTGGCAGCAGATGTTCCGCCAGTTGGTTGCGGATTCGCCCGGCCAGGTGCTGGCGTCCACGCCGAAATCCGTGCTGAG CGACGATACCAAGGTGCCCATCCGCGTCGAAGTCCGCGACAAGCAATATAAACCCGTGACCAACGCCAAAGTGCAGGCGC GCTTCCTCGAACCCGATGGAACCAGCGCGACGATGGAACTAAATCCCGTTCCGATGGAAGAAGGTATATACGGCGGGGAA TGGACGGCGGAGAAGCCGGGCTCGTACGTGGTCGATATTTTGGCCGGACATGACCAGGAAGAGACCGGGCATGACCTGCT GACCTTCCGCCGCGAGGACGGGGTGGCGGAAAACTTCCACACATCGCAGAATAAGGAACTGCTCCAGAAGCTCAGCGAAC AGACCGGCGGACGGTACTACAAGGGCAGTGAGGCGTCCAAGCTATCGAATGAAATTTCCTACTCCGAGGCCGGCATCACC ACCCGCGAGACCCGCGACCTTTGGGATATGCCGGTCGTCTTCCTCCTCGCCCTCGGCATCCGCGCCTCCGAATGGCTGCT GCGCCGGAAGTGGGGCGTAGTATGA
Upstream 100 bases:
>100_bases GAGGGCCGCGCGCCTGTGGAACTTCCCGCCAATTTACAGCTGTCTGTAACGCCAACCTGCACCTGGCACGTCCCTATACC TATCGTGATCTGTCTCTGAC
Downstream 100 bases:
>100_bases AGACGCTCGTCCTTCTCGCGCTCTCCGCCCTTTCCGCTCCCGCCGCCACCTTCTACCTCAACATGGCCGGCATCGGTGGT GAGACGGATTACACTCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide; En/Spm-Like Transposon Protein
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPIAIWLLESGLIALILFLLWHP ALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAALNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPAT RIGDTLERVLAESSSLPLGAIVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEISVDPVQGEENQLNNKITRVVN VEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTMLRTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGV EASYFTPAQQQAIKDFVDRRGGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFATEGSWRWKMWLDHADKTHPT FWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRDKQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGE WTAEKPGSYVVDILAGHDQEETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV
Sequences:
>Translated_754_residues MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPIAIWLLESGLIALILFLLWHP ALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAALNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPAT RIGDTLERVLAESSSLPLGAIVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEISVDPVQGEENQLNNKITRVVN VEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTMLRTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGV EASYFTPAQQQAIKDFVDRRGGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFATEGSWRWKMWLDHADKTHPT FWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRDKQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGE WTAEKPGSYVVDILAGHDQEETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV >Mature_754_residues MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPIAIWLLESGLIALILFLLWHP ALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAALNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPAT RIGDTLERVLAESSSLPLGAIVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEISVDPVQGEENQLNNKITRVVN VEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTMLRTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGV EASYFTPAQQQAIKDFVDRRGGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFATEGSWRWKMWLDHADKTHPT FWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRDKQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGE WTAEKPGSYVVDILAGHDQEETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83641; Mature: 83641
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPI CCHHHHHHHHCCHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCE AIWLLESGLIALILFLLWHPALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAA EEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHH LNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPATRIGDTLERVLAESSSLPLGA HHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE IVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCHHCCCCCCE TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEIS EEEEEEEECCCCCCCEEEEECCCCCEEECCEEEEECCCCCCCCEEEEECCCCCCEEEEEE VDPVQGEENQLNNKITRVVNVEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTML ECCCCCCHHHHHHHHHHEEEHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH RTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGVEASYFTPAQQQAIKDFVDRR HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCC GGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCC ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCEEEEEECCCCCCEEEEE TEGSWRWKMWLDHADKTHPTFWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRD ECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCEEEEEECC KQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGEWTAEKPGSYVVDILAGHDQE CCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCC ETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT CCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHCCCC TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MDFMFEFLFKYPANIFHKGQFVLLTPWPVWVLAFAILIAAGALFWHVRRNHGMLSGARPI CCHHHHHHHHCCHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCE AIWLLESGLIALILFLLWHPALSIATLKPQQNVVAVLVDDSRSMAINDNSGTREAAAQAA EEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHH LNSGLLKGLTDKFQVRLYKFGKDPERIQKADQLTAAAPATRIGDTLERVLAESSSLPLGA HHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE IVLLSDGADNAGGIDLATIAAIRRQRIPIHTVGFGKEHPDRDIEITDAVTPARALPDSKL EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCHHCCCCCCE TATVTLQSWGLSGSKAKLNVKESGKVLTSQEIVLKDSGQLQSETLVFNGGQAGPKTFEIS EEEEEEEECCCCCCCEEEEECCCCCEEECCEEEEECCCCCCCCEEEEECCCCCCEEEEEE VDPVQGEENQLNNKITRVVNVEKRRPRILYIQGEPVWEFKFIRRAIDDYPDIGIDLPTML ECCCCCCHHHHHHHHHHEEEHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH RTTQNKIYRQGGSSPKELEDGFPTKPEELFAYQGLIIGGVEASYFTPAQQQAIKDFVDRR HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCC GGGVLFIAGRASLSDGGWQNSPMADLIPVKLPDSRGTFHRDFSSVTLTPQGAQSILCRLD CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCC ENPARNLERWKKIPQIANYQDVGDPKPGATTLLQVTTPAKRVQPLLVTENFGRGRTVLFA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCEEEEEECCCCCCEEEEE TEGSWRWKMWLDHADKTHPTFWQQMFRQLVADSPGQVLASTPKSVLSDDTKVPIRVEVRD ECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCEEEEEECC KQYKPVTNAKVQARFLEPDGTSATMELNPVPMEEGIYGGEWTAEKPGSYVVDILAGHDQE CCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCC ETGHDLLTFRREDGVAENFHTSQNKELLQKLSEQTGGRYYKGSEASKLSNEISYSEAGIT CCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHCCCC TRETRDLWDMPVVFLLALGIRASEWLLRRKWGVV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA