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The map label for this gene is 116625481

Identifier: 116625481

GI number: 116625481

Start: 8047555

End: 8048895

Strand: Direct

Name: 116625481

Synonym: Acid_6427

Alternate gene names: NA

Gene position: 8047555-8048895 (Clockwise)

Preceding gene: 116625477

Following gene: 116625483

Centisome position: 80.75

GC content: 66.82

Gene sequence:

>1341_bases
GTGCGGGTCCTGCTTGTCTCCACGTACGAAATGGGACGGCAGCCATTCGGGCTGGCCTCTCCAGCCGCGTGGCTGCGCGC
CGAGGGTCACGAGGTCACGCAGGCCGACGTCAGCTGCACGCCGATGCCCAAGGACGCCGTGGAGGCCGCGGGCCTGATCG
CGTTCTTCCTGCCAATGCACACGGCCACCAAGCTCTTCCTGCGACTGGTGGACCGCGTGCGCGCCGTGAATCCGCGCGCC
CATCTTTGCGCCTACGGGCTTTATGCGCCGTTGAACGAGCGTCTGCTGCGCGGCGCCGGGGTGGGCACCGTGCTGGGCGG
CGAGTTCGAGAGCGGACTGCGCGACCTGGCGCGCCGGCTTTCGAGCGGCGATCCGGCTCCGGCGGCGCCGCCCGTGACGA
TTTCGATCGAGCGCCAGCAGTTTCTGGTTCCCGATCGCAAGGGGCTGCCTCCGCTGGGCGCCTACGCTCAGCTGGTGGTG
GGTAACGGCACCCGGCGTGTGGGCTACACCGAGGCGTCGCGCGGCTGCAAGCACCTCTGCCGTCACTGTCCGGTGGTCCC
GGTGTATAACGGGCGCTTCCGCATCGTGCAGGCGGACATCGTGCTGGAGGATATCCGGCGCCAGGTGGCCGCGGGCGCAG
CGCACATCACGTTCGGCGATCCCGACTTCTTCAACGGCCCGGGACACGCGGTCCCGATTGTGGAAGCGCTGCATCGCGAA
TGGCCGTGGCTGAGCTACGACGTGACGATCAAGGTCGAGCACCTGCTCAAGCATCGCGACCTGCTGCCGGTGCTGAAGGA
GACGAATTGCGCCTTTGTCACGAGCGCCATCGAATCGCTGGATGACGAGGTGCTGGTGAAGCTGGCGAAGGGGCACACAC
GCGCCGGTTTCCTGGAGGCGCTCGTGCTGATGCGCGCGGTGGACCTGCCGCTGTCGCCGACGTTTATCCCATTTCACCCG
TGGACGACGCTCGAGAGTTATCGGGAGTTCTTGCGGACGCTGGCCGAGAACGGACTTGCGTCGCAGATCACGCCGATCCA
ACTAGCGATCCGGCTGCTGATTCCCGAGGGGTCGCTGCTGATGGAACTACCGGAGGTGCGCGCGCTGGTGGGACTCTTCG
ACGCGCGCGCGCTATCGTACCCGTGGCGCAATCCCGACCCCGGGCTGGACCGGCTGTGCGCGACGATTCAGGCGACGATC
AAGCGCGGGGAAAAGCATCGCGCCACCCGGGCGGAGATTTTCCGGCAGATTTGGGATCTCGCGGGGGCGGGCGAATTTCC
TGATGTCCCGATGGCGGATCGCGCGACGATCCCGTATTTGACGGAGCCCTGGTATTGTTGA

Upstream 100 bases:

>100_bases
CCGCTGGTTCTTGAGTTCCAGGATTTCGTCGGCAATAGAGGTAACGGACAACATGAGGAATCAGGGAGTACGCTTTCAGT
TTACCAGCCATAATGAAGAT

Downstream 100 bases:

>100_bases
GCGGAGCCTACTGAAGAGCAGTTAGCTCTTGTTTAGGACAGGCGCAGCACCCGGCCGTACTAGCGGCGGTTTTCGAAGAA
TTCGCGGAGGAGTTGGACGC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRVLLVSTYEMGRQPFGLASPAAWLRAEGHEVTQADVSCTPMPKDAVEAAGLIAFFLPMHTATKLFLRLVDRVRAVNPRA
HLCAYGLYAPLNERLLRGAGVGTVLGGEFESGLRDLARRLSSGDPAPAAPPVTISIERQQFLVPDRKGLPPLGAYAQLVV
GNGTRRVGYTEASRGCKHLCRHCPVVPVYNGRFRIVQADIVLEDIRRQVAAGAAHITFGDPDFFNGPGHAVPIVEALHRE
WPWLSYDVTIKVEHLLKHRDLLPVLKETNCAFVTSAIESLDDEVLVKLAKGHTRAGFLEALVLMRAVDLPLSPTFIPFHP
WTTLESYREFLRTLAENGLASQITPIQLAIRLLIPEGSLLMELPEVRALVGLFDARALSYPWRNPDPGLDRLCATIQATI
KRGEKHRATRAEIFRQIWDLAGAGEFPDVPMADRATIPYLTEPWYC

Sequences:

>Translated_446_residues
MRVLLVSTYEMGRQPFGLASPAAWLRAEGHEVTQADVSCTPMPKDAVEAAGLIAFFLPMHTATKLFLRLVDRVRAVNPRA
HLCAYGLYAPLNERLLRGAGVGTVLGGEFESGLRDLARRLSSGDPAPAAPPVTISIERQQFLVPDRKGLPPLGAYAQLVV
GNGTRRVGYTEASRGCKHLCRHCPVVPVYNGRFRIVQADIVLEDIRRQVAAGAAHITFGDPDFFNGPGHAVPIVEALHRE
WPWLSYDVTIKVEHLLKHRDLLPVLKETNCAFVTSAIESLDDEVLVKLAKGHTRAGFLEALVLMRAVDLPLSPTFIPFHP
WTTLESYREFLRTLAENGLASQITPIQLAIRLLIPEGSLLMELPEVRALVGLFDARALSYPWRNPDPGLDRLCATIQATI
KRGEKHRATRAEIFRQIWDLAGAGEFPDVPMADRATIPYLTEPWYC
>Mature_446_residues
MRVLLVSTYEMGRQPFGLASPAAWLRAEGHEVTQADVSCTPMPKDAVEAAGLIAFFLPMHTATKLFLRLVDRVRAVNPRA
HLCAYGLYAPLNERLLRGAGVGTVLGGEFESGLRDLARRLSSGDPAPAAPPVTISIERQQFLVPDRKGLPPLGAYAQLVV
GNGTRRVGYTEASRGCKHLCRHCPVVPVYNGRFRIVQADIVLEDIRRQVAAGAAHITFGDPDFFNGPGHAVPIVEALHRE
WPWLSYDVTIKVEHLLKHRDLLPVLKETNCAFVTSAIESLDDEVLVKLAKGHTRAGFLEALVLMRAVDLPLSPTFIPFHP
WTTLESYREFLRTLAENGLASQITPIQLAIRLLIPEGSLLMELPEVRALVGLFDARALSYPWRNPDPGLDRLCATIQATI
KRGEKHRATRAEIFRQIWDLAGAGEFPDVPMADRATIPYLTEPWYC

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49361; Mature: 49361

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVSTYEMGRQPFGLASPAAWLRAEGHEVTQADVSCTPMPKDAVEAAGLIAFFLPMH
CEEEEEEHHHHCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH
TATKLFLRLVDRVRAVNPRAHLCAYGLYAPLNERLLRGAGVGTVLGGEFESGLRDLARRL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
SSGDPAPAAPPVTISIERQQFLVPDRKGLPPLGAYAQLVVGNGTRRVGYTEASRGCKHLC
CCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHH
RHCPVVPVYNGRFRIVQADIVLEDIRRQVAAGAAHITFGDPDFFNGPGHAVPIVEALHRE
HHCCCCEEECCEEEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHC
WPWLSYDVTIKVEHLLKHRDLLPVLKETNCAFVTSAIESLDDEVLVKLAKGHTRAGFLEA
CCCEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
LVLMRAVDLPLSPTFIPFHPWTTLESYREFLRTLAENGLASQITPIQLAIRLLIPEGSLL
HHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCHHH
MELPEVRALVGLFDARALSYPWRNPDPGLDRLCATIQATIKRGEKHRATRAEIFRQIWDL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AGAGEFPDVPMADRATIPYLTEPWYC
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLLVSTYEMGRQPFGLASPAAWLRAEGHEVTQADVSCTPMPKDAVEAAGLIAFFLPMH
CEEEEEEHHHHCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH
TATKLFLRLVDRVRAVNPRAHLCAYGLYAPLNERLLRGAGVGTVLGGEFESGLRDLARRL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
SSGDPAPAAPPVTISIERQQFLVPDRKGLPPLGAYAQLVVGNGTRRVGYTEASRGCKHLC
CCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHH
RHCPVVPVYNGRFRIVQADIVLEDIRRQVAAGAAHITFGDPDFFNGPGHAVPIVEALHRE
HHCCCCEEECCEEEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHC
WPWLSYDVTIKVEHLLKHRDLLPVLKETNCAFVTSAIESLDDEVLVKLAKGHTRAGFLEA
CCCEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
LVLMRAVDLPLSPTFIPFHPWTTLESYREFLRTLAENGLASQITPIQLAIRLLIPEGSLL
HHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCHHH
MELPEVRALVGLFDARALSYPWRNPDPGLDRLCATIQATIKRGEKHRATRAEIFRQIWDL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AGAGEFPDVPMADRATIPYLTEPWYC
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA