| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625443
Identifier: 116625443
GI number: 116625443
Start: 8004726
End: 8006000
Strand: Direct
Name: 116625443
Synonym: Acid_6388
Alternate gene names: NA
Gene position: 8004726-8006000 (Clockwise)
Preceding gene: 116625441
Following gene: 116625450
Centisome position: 80.32
GC content: 58.67
Gene sequence:
>1275_bases ATGCGCAATCCGAATCAGGACCGCAAGTTGTGTTCGATTCGCTCCGCGTCCCCGGCGAATTCCCGAGTGCGCTTCGGATT GCCGCGGCTCTATACTGTGGCTCTCGCTCCCGGAGTTCACGTGCACCTCCAATTCAACGTCGGCCATGCAAAGGTCTGGT TTGCTTACTACGGAATCGATCCCGCAACCAACAAACAGGCGCATGCGGACGCTGCCGGCAACTTGGTCGCGAACGTGCCG TCAACTGAGCCCACGCCGGCTCTTGCCAACCCGGTTTCGCCCGGCCCGATTGCACTTCCGATGCTCACCGCTGCACGACT GTACGTTTCAATCGACGAGCCTGTTCTGTTTCCTGTTGACCCAGCCGGCACCCCAATCCCGCCGAGAGCAGCCGATCCGA CCGACGCCAACTACCAAACGCGGTGGGATTTCTTCGAGGTGACGTATCTTCCGTTGAGGGGAACCGACGGGCTGTTCAAC TTCAATCTCTCCAATGTGCAGAGCGCCAACCTGCCGCTGTCCTTCGAAGTAAGCGGCGCAGATCCAGGCACGAAGCAGCC CGTCCAGTATTCACGCGGCTGGCTCGCAGGCGGCTTCGGGAAGTTCCTCTCCTACCTTGGGGCGAATGCCGACTTTCGCC AGCTCATACTCTCCGGCACAGGGCGAACCCTGGCGCCGGGTACCGCGATTACGGCATTTGAACAGAAGGTCATTGCGGCG CCGTTGATGAGCGTCAGCTATTGGAAGACGTACGTAGAACAGGTGTGGGCGAAGTTTGCGGGTGTGGACCTGACATTCGT CGGCGATCCGCCGCCGCAATCGAATACGTTCGTGACCTGGACGGGCCGGGTAGGGAACGGGCAATTCAGTTTCACGACCA CTGACCTCCCTGACCTGGTGCCGATCGTCCTGGCTCCTCCTTCGACCTCCGATCTGTTTGAGAATAACTTCCTGTTCTGC GTATCCGGGTGCGGGACGCCGGGTTCGCTGCAGCAGAACTACGCCCTGCAGTTATTTGGCACGCTTTGCGCCGCCTTCAA CCGCTCCGTGATGCTGACCACGACCACGCTTGCCAATGCACCAGACTGCGCGTGGTGCAGGGCGACAGAGAAGTTTTATC AGGATCCCACCACGAATCACTATTCCAAGGCCATTCATGCGAACGCGATCGATGGCCTCGCCTATGCGTTTCAAAGTGAC GATCACTGCAACGCGAGTGATTTTGTTTCGCTGATTAACCCGACTGTCTTAACAATCACCTTGAGCGACGATTGA
Upstream 100 bases:
>100_bases GAAGTAGTGAATTCGAGTGCCATGCCCTCATTATCGTTCAGTTCGCCTTTTGCCAGATCGATAGCCCTCGGAGCAGTTTT CCTATCGCGACCATACCCCA
Downstream 100 bases:
>100_bases GGCGCGAGATAGGAAGTAGTGAATTCGAGCCCCACGCCGTCGGGTCCATGGCGAGAATAGAGGGGACCGAGCCATCGTGG AGGCGCAAATAGGCGTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar Hydrolase; Glucan Endo-1 3-Beta-D-Glucosidase; Secreted Hydrolase; Glucan Endo-1 3-Beta-Glucosidase; Beta And Gamma Crystallin; Secreted Sugar Hydrolase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRNPNQDRKLCSIRSASPANSRVRFGLPRLYTVALAPGVHVHLQFNVGHAKVWFAYYGIDPATNKQAHADAAGNLVANVP STEPTPALANPVSPGPIALPMLTAARLYVSIDEPVLFPVDPAGTPIPPRAADPTDANYQTRWDFFEVTYLPLRGTDGLFN FNLSNVQSANLPLSFEVSGADPGTKQPVQYSRGWLAGGFGKFLSYLGANADFRQLILSGTGRTLAPGTAITAFEQKVIAA PLMSVSYWKTYVEQVWAKFAGVDLTFVGDPPPQSNTFVTWTGRVGNGQFSFTTTDLPDLVPIVLAPPSTSDLFENNFLFC VSGCGTPGSLQQNYALQLFGTLCAAFNRSVMLTTTTLANAPDCAWCRATEKFYQDPTTNHYSKAIHANAIDGLAYAFQSD DHCNASDFVSLINPTVLTITLSDD
Sequences:
>Translated_424_residues MRNPNQDRKLCSIRSASPANSRVRFGLPRLYTVALAPGVHVHLQFNVGHAKVWFAYYGIDPATNKQAHADAAGNLVANVP STEPTPALANPVSPGPIALPMLTAARLYVSIDEPVLFPVDPAGTPIPPRAADPTDANYQTRWDFFEVTYLPLRGTDGLFN FNLSNVQSANLPLSFEVSGADPGTKQPVQYSRGWLAGGFGKFLSYLGANADFRQLILSGTGRTLAPGTAITAFEQKVIAA PLMSVSYWKTYVEQVWAKFAGVDLTFVGDPPPQSNTFVTWTGRVGNGQFSFTTTDLPDLVPIVLAPPSTSDLFENNFLFC VSGCGTPGSLQQNYALQLFGTLCAAFNRSVMLTTTTLANAPDCAWCRATEKFYQDPTTNHYSKAIHANAIDGLAYAFQSD DHCNASDFVSLINPTVLTITLSDD >Mature_424_residues MRNPNQDRKLCSIRSASPANSRVRFGLPRLYTVALAPGVHVHLQFNVGHAKVWFAYYGIDPATNKQAHADAAGNLVANVP STEPTPALANPVSPGPIALPMLTAARLYVSIDEPVLFPVDPAGTPIPPRAADPTDANYQTRWDFFEVTYLPLRGTDGLFN FNLSNVQSANLPLSFEVSGADPGTKQPVQYSRGWLAGGFGKFLSYLGANADFRQLILSGTGRTLAPGTAITAFEQKVIAA PLMSVSYWKTYVEQVWAKFAGVDLTFVGDPPPQSNTFVTWTGRVGNGQFSFTTTDLPDLVPIVLAPPSTSDLFENNFLFC VSGCGTPGSLQQNYALQLFGTLCAAFNRSVMLTTTTLANAPDCAWCRATEKFYQDPTTNHYSKAIHANAIDGLAYAFQSD DHCNASDFVSLINPTVLTITLSDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45787; Mature: 45787
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNPNQDRKLCSIRSASPANSRVRFGLPRLYTVALAPGVHVHLQFNVGHAKVWFAYYGID CCCCCCCHHEEEECCCCCCCCEEEECCCEEEEEEECCCEEEEEEEECCCEEEEEEEECCC PATNKQAHADAAGNLVANVPSTEPTPALANPVSPGPIALPMLTAARLYVSIDEPVLFPVD CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEEECCCEEEEEC PAGTPIPPRAADPTDANYQTRWDFFEVTYLPLRGTDGLFNFNLSNVQSANLPLSFEVSGA CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCC DPGTKQPVQYSRGWLAGGFGKFLSYLGANADFRQLILSGTGRTLAPGTAITAFEQKVIAA CCCCCCCHHHCCCEEECCHHHHHHHHCCCCHHHHHHHCCCCCEECCCCEEHHHHHHHHHH PLMSVSYWKTYVEQVWAKFAGVDLTFVGDPPPQSNTFVTWTGRVGNGQFSFTTTDLPDLV HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCE PIVLAPPSTSDLFENNFLFCVSGCGTPGSLQQNYALQLFGTLCAAFNRSVMLTTTTLANA EEEECCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC PDCAWCRATEKFYQDPTTNHYSKAIHANAIDGLAYAFQSDDHCNASDFVSLINPTVLTIT CCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHCCCEEEEEE LSDD ECCC >Mature Secondary Structure MRNPNQDRKLCSIRSASPANSRVRFGLPRLYTVALAPGVHVHLQFNVGHAKVWFAYYGID CCCCCCCHHEEEECCCCCCCCEEEECCCEEEEEEECCCEEEEEEEECCCEEEEEEEECCC PATNKQAHADAAGNLVANVPSTEPTPALANPVSPGPIALPMLTAARLYVSIDEPVLFPVD CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEEECCCEEEEEC PAGTPIPPRAADPTDANYQTRWDFFEVTYLPLRGTDGLFNFNLSNVQSANLPLSFEVSGA CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCC DPGTKQPVQYSRGWLAGGFGKFLSYLGANADFRQLILSGTGRTLAPGTAITAFEQKVIAA CCCCCCCHHHCCCEEECCHHHHHHHHCCCCHHHHHHHCCCCCEECCCCEEHHHHHHHHHH PLMSVSYWKTYVEQVWAKFAGVDLTFVGDPPPQSNTFVTWTGRVGNGQFSFTTTDLPDLV HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCE PIVLAPPSTSDLFENNFLFCVSGCGTPGSLQQNYALQLFGTLCAAFNRSVMLTTTTLANA EEEECCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC PDCAWCRATEKFYQDPTTNHYSKAIHANAIDGLAYAFQSDDHCNASDFVSLINPTVLTIT CCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHCCCEEEEEE LSDD ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA