Click here to switch to the map view.

The map label for this gene is 116625432

Identifier: 116625432

GI number: 116625432

Start: 7993564

End: 7994487

Strand: Reverse

Name: 116625432

Synonym: Acid_6377

Alternate gene names: NA

Gene position: 7994487-7993564 (Counterclockwise)

Preceding gene: 116625433

Following gene: 116625426

Centisome position: 80.22

GC content: 59.96

Gene sequence:

>924_bases
ATGTTTCGAGACAGCGTAGTGGTGTGTTCTGTCTGGGCTTTCCTGGGAGTTGCCGTCACGGCGCAAGAGGTGACGATTAC
TCCGCGCCCGCGCGTGCAAGCGGTGAATATGCCGCGCGCCAACCTGCGCATGGATGTCCAAATGGTGCAGATCCCGGTGA
CCGTTACGGATCTGCGCGGCAAACCGCTGGTGGACTTGAGCAAGACGAATTTTCGCGTCTTCGAGGATGAAGTGGAGAAG
CCGATCTCGGCGTTTTTCACGGCGGACACACCGCTCTCGACCGGCGTGGTTTTCGATAGCAGCAGGAGCATGAAGAACCG
GCTGCAGGATGCGCGCCAGTCCGTGGAGCAGTTTCTTCGCACGGGATCGACGGGCGATGAGTATTTTCTGATTCGCTTCA
GCGACGAAGCGAAAATGCTTGCGCCGTTCACCGCGGACACGGAAGAGATCGCGCGCCAACTGGGCTCGATCGAGGCCAAG
GGCTGGACCGCGCTCAACGACTCGATCGTGCTGGCCGCCAACCAGAGCCGCAAGGCTCGCAATCACCGCAAGGCGTTGCT
GGTGATCAGCGATGGCGGCGACAACAACAGCCGCTATACAGTCGGCGAGATGATCTCGATCTTGCGCGAGGCCGACCTGC
GGGTCTATGCGGTGAGCATTTTCGAGAGATCTCAACTATTGGAAAAGATCTGCGAGGAAACCGGCGGACGCGCGCTGTGG
GTGCGCAAACTGGGCGACTTGCCGGACATCATGGAGCGGCTGAGTCAGGAAATGCGGTCCGAATACATCGTTGGGTTCAC
GCCGGACGGGCGCCAAAACGATGGACGCTATCACAAAGTGCGGATCGCGGTTGAGCCGCCCGCCGGGATGCCGCAAGTGC
GGACATCCTGGCGGCACGGCTATTTCGCACCAGAGGAAAATTAA

Upstream 100 bases:

>100_bases
ATAACCAAAAGCCACGGATGCGCGTTTAGAAAACCTTCGATATACTAGGCACCTTGAAGTTTGCAGCACCTTGAAGTTCG
TTCCCGGAGGGGGCACGAAT

Downstream 100 bases:

>100_bases
GGCGATACTACCAGCGGAAGCCGAACGTAACGGGTATGATGTCGGTACCCACGTTGCGCGTATAGATGTGATGATAGCGG
GCTTCGGCGAACGCCTTGAT

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MFRDSVVVCSVWAFLGVAVTAQEVTITPRPRVQAVNMPRANLRMDVQMVQIPVTVTDLRGKPLVDLSKTNFRVFEDEVEK
PISAFFTADTPLSTGVVFDSSRSMKNRLQDARQSVEQFLRTGSTGDEYFLIRFSDEAKMLAPFTADTEEIARQLGSIEAK
GWTALNDSIVLAANQSRKARNHRKALLVISDGGDNNSRYTVGEMISILREADLRVYAVSIFERSQLLEKICEETGGRALW
VRKLGDLPDIMERLSQEMRSEYIVGFTPDGRQNDGRYHKVRIAVEPPAGMPQVRTSWRHGYFAPEEN

Sequences:

>Translated_307_residues
MFRDSVVVCSVWAFLGVAVTAQEVTITPRPRVQAVNMPRANLRMDVQMVQIPVTVTDLRGKPLVDLSKTNFRVFEDEVEK
PISAFFTADTPLSTGVVFDSSRSMKNRLQDARQSVEQFLRTGSTGDEYFLIRFSDEAKMLAPFTADTEEIARQLGSIEAK
GWTALNDSIVLAANQSRKARNHRKALLVISDGGDNNSRYTVGEMISILREADLRVYAVSIFERSQLLEKICEETGGRALW
VRKLGDLPDIMERLSQEMRSEYIVGFTPDGRQNDGRYHKVRIAVEPPAGMPQVRTSWRHGYFAPEEN
>Mature_307_residues
MFRDSVVVCSVWAFLGVAVTAQEVTITPRPRVQAVNMPRANLRMDVQMVQIPVTVTDLRGKPLVDLSKTNFRVFEDEVEK
PISAFFTADTPLSTGVVFDSSRSMKNRLQDARQSVEQFLRTGSTGDEYFLIRFSDEAKMLAPFTADTEEIARQLGSIEAK
GWTALNDSIVLAANQSRKARNHRKALLVISDGGDNNSRYTVGEMISILREADLRVYAVSIFERSQLLEKICEETGGRALW
VRKLGDLPDIMERLSQEMRSEYIVGFTPDGRQNDGRYHKVRIAVEPPAGMPQVRTSWRHGYFAPEEN

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34623; Mature: 34623

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50234 VWFA ; PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRDSVVVCSVWAFLGVAVTAQEVTITPRPRVQAVNMPRANLRMDVQMVQIPVTVTDLRG
CCCCHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEEEEEEECCCC
KPLVDLSKTNFRVFEDEVEKPISAFFTADTPLSTGVVFDSSRSMKNRLQDARQSVEQFLR
CCCEEECCCCCEEEHHHHCCHHHHEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
TGSTGDEYFLIRFSDEAKMLAPFTADTEEIARQLGSIEAKGWTALNDSIVLAANQSRKAR
CCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCEEEEECCCHHHC
NHRKALLVISDGGDNNSRYTVGEMISILREADLRVYAVSIFERSQLLEKICEETGGRALW
CCCEEEEEEECCCCCCCCEEHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCEEE
VRKLGDLPDIMERLSQEMRSEYIVGFTPDGRQNDGRYHKVRIAVEPPAGMPQVRTSWRHG
EEHHCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCC
YFAPEEN
CCCCCCC
>Mature Secondary Structure
MFRDSVVVCSVWAFLGVAVTAQEVTITPRPRVQAVNMPRANLRMDVQMVQIPVTVTDLRG
CCCCHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEEEEEEECCCC
KPLVDLSKTNFRVFEDEVEKPISAFFTADTPLSTGVVFDSSRSMKNRLQDARQSVEQFLR
CCCEEECCCCCEEEHHHHCCHHHHEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
TGSTGDEYFLIRFSDEAKMLAPFTADTEEIARQLGSIEAKGWTALNDSIVLAANQSRKAR
CCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCEEEEECCCHHHC
NHRKALLVISDGGDNNSRYTVGEMISILREADLRVYAVSIFERSQLLEKICEETGGRALW
CCCEEEEEEECCCCCCCCEEHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCEEE
VRKLGDLPDIMERLSQEMRSEYIVGFTPDGRQNDGRYHKVRIAVEPPAGMPQVRTSWRHG
EEHHCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCC
YFAPEEN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA