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The map label for this gene is potA [H]

Identifier: 116625428

GI number: 116625428

Start: 7990706

End: 7991731

Strand: Direct

Name: potA [H]

Synonym: Acid_6373

Alternate gene names: 116625428

Gene position: 7990706-7991731 (Clockwise)

Preceding gene: 116625427

Following gene: 116625429

Centisome position: 80.18

GC content: 67.93

Gene sequence:

>1026_bases
ATGACTCACGCCCGGGTTGCCCGCACGGTCGAAGGACTCTCGCTCGATCTCGATCTCGCGCTGCCCCCTGGCATCACCAC
CCTCACGGGCCCTCCATCTTCGGGCAAGACGCTCCTCCTCGAGATCATCGCCGGCTTCGCCCCCGCCGATGTGGGCCGCA
TCCTGATCGACGACGCCATCGTCTTCGATGCCGCCTCGCGCGTTAACCTGCCCGCCCGCCGACGCCAATGCGGCTATATC
CCCGCGCGCGACGGGCTTTTCCCAGCGATGACGGTGCGCCAGAACCTGATGTTCGCCGCCGCCGGCTGGGCCCGCCTGGA
ACGCCACAAGCGCGTCGCCGAAATGCTCGAGCGCTTCGAACTCGCCGACGCCCTCGACCTTCACCCCCGCGACCTTCCGC
CCGCCCGCCGCCTCCGCGCCGAAATTGCCCGCGCCCTCATGGCCGAGCCCAGCCTCCTGCTCATCGACGATCGCGCCCCC
GATGAATCGCTGCTCCGCATCCTGCCCGCCGCGTTCGACGGTCCCATCCTGCTGGTCACGGCCGATCTCGATCTCTGTTA
CGCCGCCGCCGCCCACCTCGCGCTGCTCGAGGCCGGCCGCATCGTACAGCGCGGCCCGGCGCGCGACGTCATCGAACACC
CCGAGTCGCTCGCTTCCGCGCGGCTTCTCGGCATCGCCAATCTCTTTGCCGGCTCCATCGCCGGGCTCGATCCAGGCCGC
AATCAGAGTCGCCTCGAGTGCGAATCGTTCACCCTCTCCGCGCCTTACCTGAAAGGCCACCTCAAGGGCGATCGCGTGGC
CGTCGCCATTCGCGCCGAGGATGTCCGTGTTCATGCCGGCGAAATCGAACCCGGCGTGAATTTCCTCCCCGCCACGCTCC
TGCACACCAGCGAACGGCCGCGAGCCGTCCTGTTGGAATTCGCCGGCGGCATCTCCGCCTGCCTCTCGCGCGAGCAATTC
GAGCAACAGAAGGATAATAGAAGCTGGCAGGTGGAGTTCCCGCCCGCCGCGCTGCGTGTCTTTTAA

Upstream 100 bases:

>100_bases
TCTGGCGCGTCCTGTTGCCTCTCGGATGGGCCCCAGTCCTCGCCGCTACCGCCATCGCCTTCGCGCGCGTGTTCGCCGAG
TGGACCATCGTGTGCGCGCG

Downstream 100 bases:

>100_bases
AATGCCGCTGCAATCCCTGCCCGAATACGAACTGCTTGCCGCCCAGGCTCACGGCCACCTCTGCGCAGGCCAGATTCTCG
GCCTTCGCATGGCGCTTCAC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTHARVARTVEGLSLDLDLALPPGITTLTGPPSSGKTLLLEIIAGFAPADVGRILIDDAIVFDAASRVNLPARRRQCGYI
PARDGLFPAMTVRQNLMFAAAGWARLERHKRVAEMLERFELADALDLHPRDLPPARRLRAEIARALMAEPSLLLIDDRAP
DESLLRILPAAFDGPILLVTADLDLCYAAAAHLALLEAGRIVQRGPARDVIEHPESLASARLLGIANLFAGSIAGLDPGR
NQSRLECESFTLSAPYLKGHLKGDRVAVAIRAEDVRVHAGEIEPGVNFLPATLLHTSERPRAVLLEFAGGISACLSREQF
EQQKDNRSWQVEFPPAALRVF

Sequences:

>Translated_341_residues
MTHARVARTVEGLSLDLDLALPPGITTLTGPPSSGKTLLLEIIAGFAPADVGRILIDDAIVFDAASRVNLPARRRQCGYI
PARDGLFPAMTVRQNLMFAAAGWARLERHKRVAEMLERFELADALDLHPRDLPPARRLRAEIARALMAEPSLLLIDDRAP
DESLLRILPAAFDGPILLVTADLDLCYAAAAHLALLEAGRIVQRGPARDVIEHPESLASARLLGIANLFAGSIAGLDPGR
NQSRLECESFTLSAPYLKGHLKGDRVAVAIRAEDVRVHAGEIEPGVNFLPATLLHTSERPRAVLLEFAGGISACLSREQF
EQQKDNRSWQVEFPPAALRVF
>Mature_340_residues
THARVARTVEGLSLDLDLALPPGITTLTGPPSSGKTLLLEIIAGFAPADVGRILIDDAIVFDAASRVNLPARRRQCGYIP
ARDGLFPAMTVRQNLMFAAAGWARLERHKRVAEMLERFELADALDLHPRDLPPARRLRAEIARALMAEPSLLLIDDRAPD
ESLLRILPAAFDGPILLVTADLDLCYAAAAHLALLEAGRIVQRGPARDVIEHPESLASARLLGIANLFAGSIAGLDPGRN
QSRLECESFTLSAPYLKGHLKGDRVAVAIRAEDVRVHAGEIEPGVNFLPATLLHTSERPRAVLLEFAGGISACLSREQFE
QQKDNRSWQVEFPPAALRVF

Specific function: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [H]

COG id: COG3842

COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787370, Length=275, Percent_Identity=29.8181818181818, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081791, Length=303, Percent_Identity=28.0528052805281, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788761, Length=236, Percent_Identity=30.0847457627119, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787712, Length=239, Percent_Identity=30.1255230125523, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786398, Length=283, Percent_Identity=27.9151943462898, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786563, Length=205, Percent_Identity=32.1951219512195, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790467, Length=224, Percent_Identity=27.6785714285714, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787029, Length=213, Percent_Identity=28.169014084507, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788450, Length=214, Percent_Identity=28.9719626168224, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786872, Length=198, Percent_Identity=25.2525252525253, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=28.8990825688073, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789672, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787089, Length=225, Percent_Identity=28.8888888888889, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789032, Length=221, Percent_Identity=28.0542986425339, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789593, Length=154, Percent_Identity=33.7662337662338, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787105, Length=210, Percent_Identity=30, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=232, Percent_Identity=26.7241379310345, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR008995
- InterPro:   IPR017879
- InterPro:   IPR005893
- InterPro:   IPR013611 [H]

Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]

EC number: =3.6.3.31 [H]

Molecular weight: Translated: 37073; Mature: 36942

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHARVARTVEGLSLDLDLALPPGITTLTGPPSSGKTLLLEIIAGFAPADVGRILIDDAI
CCCHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHCCCCCHHCHHHHHHHH
VFDAASRVNLPARRRQCGYIPARDGLFPAMTVRQNLMFAAAGWARLERHKRVAEMLERFE
HHHCHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADALDLHPRDLPPARRLRAEIARALMAEPSLLLIDDRAPDESLLRILPAAFDGPILLVT
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEE
ADLDLCYAAAAHLALLEAGRIVQRGPARDVIEHPESLASARLLGIANLFAGSIAGLDPGR
ECHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQSRLECESFTLSAPYLKGHLKGDRVAVAIRAEDVRVHAGEIEPGVNFLPATLLHTSERP
CCCCEEEEEEEEECCHHHCCCCCCEEEEEEEECCEEEECCCCCCCCCHHHHHHHCCCCCC
RAVLLEFAGGISACLSREQFEQQKDNRSWQVEFPPAALRVF
CEEEEEHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHCCC
>Mature Secondary Structure 
THARVARTVEGLSLDLDLALPPGITTLTGPPSSGKTLLLEIIAGFAPADVGRILIDDAI
CCHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHCCCCCHHCHHHHHHHH
VFDAASRVNLPARRRQCGYIPARDGLFPAMTVRQNLMFAAAGWARLERHKRVAEMLERFE
HHHCHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADALDLHPRDLPPARRLRAEIARALMAEPSLLLIDDRAPDESLLRILPAAFDGPILLVT
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEE
ADLDLCYAAAAHLALLEAGRIVQRGPARDVIEHPESLASARLLGIANLFAGSIAGLDPGR
ECHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQSRLECESFTLSAPYLKGHLKGDRVAVAIRAEDVRVHAGEIEPGVNFLPATLLHTSERP
CCCCEEEEEEEEECCHHHCCCCCCEEEEEEEECCEEEECCCCCCCCCHHHHHHHCCCCCC
RAVLLEFAGGISACLSREQFEQQKDNRSWQVEFPPAALRVF
CEEEEEHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]