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The map label for this gene is nusG [H]

Identifier: 116625380

GI number: 116625380

Start: 7942642

End: 7943361

Strand: Direct

Name: nusG [H]

Synonym: Acid_6325

Alternate gene names: 116625380

Gene position: 7942642-7943361 (Clockwise)

Preceding gene: 116625379

Following gene: 116625381

Centisome position: 79.7

GC content: 59.86

Gene sequence:

>720_bases
ATGGCCGACGAGAAGGATTACTTCGAAGAACAACCGGAAGATGACAACCCCGCCGGCGACGGCGAGGAGAGTGCTCCGCC
CGTTGAAGTGGAAGGCGCCAGTTCCCAGGTCGGTGAAACTCCGGCTGAGTTCCTGGAAACACCGGCGGAAGGCGCCGCGC
CGGAGCATCAGGGCGGCTACGACGAGTCGTCCGCCAAGAAGTGGTACATCATCCACACCTATTCGGGATTTGAGAATAAG
GTTCAGGAATCGCTGCGCACGCGCGCCGATGCCTTCGGGTTCGCGGATAAGATCGGGCAGATCCTGATCCCCACCGAAGA
AGTCGTGGAACTGCGCAACGGCAAGAAGGTCACCAGCAAGCGCCTGGTCTATCCGGGTTACGTGCTGGTGGAAATGGAAA
TGAACGACGCGCTGTGGCACGAAGTCAAGAATACGCCGCGCGTGACGGGCTTTGTGGGCGGCGGCAATTCGCCGGTGCCT
TTGAGCGCGGATGAAGTGAACTCGATTTTGTACCGGCAGGCGTCGAGCGCGGAGCGTCCGAGGCCGAAGATGACGTTCGA
AAAGAACGATTCGGTGCGCATCATCGACGGACCGTTCGCGAACTTCTCGGGCAAGGTGGACGAGGTCAATCCGGAGCGCG
GCACGCTGCGCGTGATGGTGACGATCTTCGGACGCGCCACTCCGGTGGAACTGGAATTTTTGCAGGTGGAAAAGGTTTAA

Upstream 100 bases:

>100_bases
TTCAGTGTGTTTGCGTTCGCGGGGTATTTCGCGATAGTGGATTCGGTGCTTACCAAGGGTGTGAAAGCGGTCCTGGAGTT
CTTCACTAAATAGGCGGGAT

Downstream 100 bases:

>100_bases
CGTATGGCGAAGAAAGTTACTGCGCAGGTCAAACTGCAAATTCCGGCGGGTAAGGCAACGCCGGCTCCTCCCGTGGGTAC
CGCTCTCGGCCCGCAGGGCG

Product: transcription antitermination protein nusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MADEKDYFEEQPEDDNPAGDGEESAPPVEVEGASSQVGETPAEFLETPAEGAAPEHQGGYDESSAKKWYIIHTYSGFENK
VQESLRTRADAFGFADKIGQILIPTEEVVELRNGKKVTSKRLVYPGYVLVEMEMNDALWHEVKNTPRVTGFVGGGNSPVP
LSADEVNSILYRQASSAERPRPKMTFEKNDSVRIIDGPFANFSGKVDEVNPERGTLRVMVTIFGRATPVELEFLQVEKV

Sequences:

>Translated_239_residues
MADEKDYFEEQPEDDNPAGDGEESAPPVEVEGASSQVGETPAEFLETPAEGAAPEHQGGYDESSAKKWYIIHTYSGFENK
VQESLRTRADAFGFADKIGQILIPTEEVVELRNGKKVTSKRLVYPGYVLVEMEMNDALWHEVKNTPRVTGFVGGGNSPVP
LSADEVNSILYRQASSAERPRPKMTFEKNDSVRIIDGPFANFSGKVDEVNPERGTLRVMVTIFGRATPVELEFLQVEKV
>Mature_238_residues
ADEKDYFEEQPEDDNPAGDGEESAPPVEVEGASSQVGETPAEFLETPAEGAAPEHQGGYDESSAKKWYIIHTYSGFENKV
QESLRTRADAFGFADKIGQILIPTEEVVELRNGKKVTSKRLVYPGYVLVEMEMNDALWHEVKNTPRVTGFVGGGNSPVPL
SADEVNSILYRQASSAERPRPKMTFEKNDSVRIIDGPFANFSGKVDEVNPERGTLRVMVTIFGRATPVELEFLQVEKV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=178, Percent_Identity=50.561797752809, Blast_Score=191, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 26415; Mature: 26283

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01108 RIBOSOMAL_L24 ; PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEKDYFEEQPEDDNPAGDGEESAPPVEVEGASSQVGETPAEFLETPAEGAAPEHQGGY
CCCCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
DESSAKKWYIIHTYSGFENKVQESLRTRADAFGFADKIGQILIPTEEVVELRNGKKVTSK
CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCCCCCCC
RLVYPGYVLVEMEMNDALWHEVKNTPRVTGFVGGGNSPVPLSADEVNSILYRQASSAERP
EEECCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
RPKMTFEKNDSVRIIDGPFANFSGKVDEVNPERGTLRVMVTIFGRATPVELEFLQVEKV
CCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure 
ADEKDYFEEQPEDDNPAGDGEESAPPVEVEGASSQVGETPAEFLETPAEGAAPEHQGGY
CCCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
DESSAKKWYIIHTYSGFENKVQESLRTRADAFGFADKIGQILIPTEEVVELRNGKKVTSK
CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCCCCCCC
RLVYPGYVLVEMEMNDALWHEVKNTPRVTGFVGGGNSPVPLSADEVNSILYRQASSAERP
EEECCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
RPKMTFEKNDSVRIIDGPFANFSGKVDEVNPERGTLRVMVTIFGRATPVELEFLQVEKV
CCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]