| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625372
Identifier: 116625372
GI number: 116625372
Start: 7934792
End: 7937368
Strand: Direct
Name: 116625372
Synonym: Acid_6317
Alternate gene names: NA
Gene position: 7934792-7937368 (Clockwise)
Preceding gene: 116625367
Following gene: 116625373
Centisome position: 79.62
GC content: 65.42
Gene sequence:
>2577_bases ATGTCTAAGAAATATTCCCGATTGGCAGCGGCGGTGGCAACAACCGGAGTGCAGCCCCACGAGCGCGACCGCATCGCTCA ACTGATTGCCTCGAACCGGTCGGATAGCGCGGTGGACGCTGCCAAGGCCATTCACAAACGCTGCAACACGCCCGAATCTG AATCCTTATTGCTGGACGCCTACGGCGCTCGCGTGCGCTCTCTGCTCGAGCGCCGGTTGGACCGCGAAGCAGCCGCACTC ATGGACTTGGTGCGCGAACGCTACCCCGCCGCGGCAGCGGAGCGGCTGAAGCAATTGACCGCGGTCAAAGCCGCCCGTAA CGGCGATCTGAGCGCGTTGCTTGAGCCGCTGAAGGACCCCTCGCTGCAGCCTGAAAAACAGGCGGAGATCGCAACCCTGA TCCGGCGCAACGTGGTCGATCTGCGCGCCCTCGCGGAGTGCCAGGCGCTGAACGCGGATCACCCGCTGCGCATCGCGGCC GCGGCCCTTTGGCGGGCGTTCGAAGCGGTGACCTCGGGACCCGTGCCGGAGGAGGCTCTGGCCCTGCCCGAGGTCGCGCG CTCCAGCCCGCTGGCGCCATGGAAGTTGCTGGTGCGAGCGATCGCGGCTTACTACCGGAAGGACGATGAATTGTGCGCAA AATGCCTGGCGGCGATCGAGGCGGATTCCGCCGCCGCGAGGCTGTCCCCACCCTTGCGTAAGCTGATCCACCTGCCGCAG AATCTCACGCCGGCCGCATTGGAATTGGTGAACCGCGTGGATGGAAACTTCGATTTCCTGCGCACCCGGCTCAAGGCGCT GGATTCGGCGCTCGATCGCGGCAACCGGCCGCAGATCCTGGACGAAATCCGCAACGCCGTGGCCGCGTGCAGCGGCGCAG TGCCGGAATTGATGGAGCGCCTCAGGCAGCATATCTCCGTCCGCAGCCTTTTGGAGGGATTGAATGCGGGAACCGTGGCA AGCGCGATGGGCGGTTCCTCGCTGAAGAACGCCCATTTCTGGCGCCTGCGGGCGCGGGCCCACGAAGAGAAAAACGGAGA ACCCGGGGATATCGCCCTCGCCTGCAGTTGTTGGGAGGAATTCCGCAAGCACGCTATTCGCGAGGGCTGGTTCCCGGCCA AAGGCCCCGAAGTCGCCACTCTGCACCTGCATATGGCGGACCTTCTTCAGCGCCTGGACGAGGAGACCCTGCGCAACGTT CGCTACCGTCTCCAGCGTCAATTCGATTTTCATAAGGCCGACTATCGCGACCAGCCGCCGGTGCTGCGGATCCTCATGCC GACCCACGGGAATTTAGCCTTCCTGGATTCGGGGCTGCTGCTGGAGCGGGCCTGCCAGGCCGACCCTTGCCGGGAGAACT TCGCGCGGCGTCTGGCCTACTGCGCCGAGATCGCGCCCGAGACGTGCGACACGGTGGCGGAACAATGGGCGGCGGCCCTG CCCCGGGATATTACTCCGCTGCTGCACCTGATGCGCTCCGCCGAGCAGCGCGACGCGCTGCAGAAGGCCTTCGGGCTGAT GGAGCGGGCCGAAAAGATCGATGGAGTGAATCCCGATGTGCGGCGCGCAAGACTGCGCCTTCTGGCTGCTATCGCGGTGC GGCACCTCCGGCAAAACAAACCCAAGCTGGCGGACAAGGACCTGAGCCAGATCGAAGCGCTGCCGCAATCGCAGCAGGGC GACCGTCCGGCCTTTGTGGCGGCGCTGCGCTTTGTCTGGTGCCTGGCGCGGAACGCGAAGGATGAGGCCGATGCAGCCTA TGCAGCCGCGGTCCGGGTCCTCGGAGACGAGGCGACCACACAGATTCTCTTCATAGAAGCGGCGCGCTGGTGCGGGCGCA GCGATTGCAAGCTGGCCAAATCGCCGAGACCCAGGACTACATTAGTTGCAGCTTTGGGCCGCATCTGCGCCCTGGCCGAC GACGTGGGCATGGAACTGGCAACCACCGCGGACATCTGGAAACAGCTGGAAACGGAGCTCTCGGCTCCGAAAATCTCGGT GAACCCGAGGGCATTGGAAGCGCTGGGCAACCTGGCGATGGCGGCCGCCCAGATTCCGATAGCCTACGCTCTGGCCGGAG CCGGGCTGGCGCAAGGGACCGAAAGCCATGCGCAGTTTCTGTTTCTGCGCGCCCAATCGCTGCCCCCGTGGGAAGACGAG CGGCGTGACCTCTGCCTGGCCGCCGCGGCCGAACTGGCGCGCCGCCGCCACGATTCGGAATTGTTGACCAAAATCGGATT ATGGCGCCAGGTGGTATCGGAATTCACCGGCTTCGGGGAGTTCGCCACGGCAGCGCCCGGTACCGAGGAGATCGGCCGTC TGGTGGAGCGCGAGATCGGCGATCGCGACTATCCCGGTACACCGCCGGATGAGGACGAACTGGAAGACGACGAGGACTGC CCGTGTCCCGCCTGCTGCGCCAAGCGCGGCCAACCGCCGCCGGAAATTCGGGAAATGGTGGAGCAACTCGGGCCGGACGC GGTGATGCAGGCTCTGGCCGAGATCTTGGGCGGCGGCGGCAGAAAAAAGCGCGGCCGGGGGCGGGGGCCGCTGGACGATT TAGACGTTCCCTTATGA
Upstream 100 bases:
>100_bases GCACTCGACACGCCCCGGCTGGCCGCGCCTTACAAGACCCGATCGATTGCGCTAAAATTTCGGTTGATCCCCTCCCCCGG GCCGTCGAAAAGGTCTACCG
Downstream 100 bases:
>100_bases GAAACGGTCATGACCAACGAAGATCCCCGACAGGTGCTGGAACTTCCGCCCGATGCGGGCGATGAAGAGATCCGCGCCGC ATACCTCCGGAAGGTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MSKKYSRLAAAVATTGVQPHERDRIAQLIASNRSDSAVDAAKAIHKRCNTPESESLLLDAYGARVRSLLERRLDREAAAL MDLVRERYPAAAAERLKQLTAVKAARNGDLSALLEPLKDPSLQPEKQAEIATLIRRNVVDLRALAECQALNADHPLRIAA AALWRAFEAVTSGPVPEEALALPEVARSSPLAPWKLLVRAIAAYYRKDDELCAKCLAAIEADSAAARLSPPLRKLIHLPQ NLTPAALELVNRVDGNFDFLRTRLKALDSALDRGNRPQILDEIRNAVAACSGAVPELMERLRQHISVRSLLEGLNAGTVA SAMGGSSLKNAHFWRLRARAHEEKNGEPGDIALACSCWEEFRKHAIREGWFPAKGPEVATLHLHMADLLQRLDEETLRNV RYRLQRQFDFHKADYRDQPPVLRILMPTHGNLAFLDSGLLLERACQADPCRENFARRLAYCAEIAPETCDTVAEQWAAAL PRDITPLLHLMRSAEQRDALQKAFGLMERAEKIDGVNPDVRRARLRLLAAIAVRHLRQNKPKLADKDLSQIEALPQSQQG DRPAFVAALRFVWCLARNAKDEADAAYAAAVRVLGDEATTQILFIEAARWCGRSDCKLAKSPRPRTTLVAALGRICALAD DVGMELATTADIWKQLETELSAPKISVNPRALEALGNLAMAAAQIPIAYALAGAGLAQGTESHAQFLFLRAQSLPPWEDE RRDLCLAAAAELARRRHDSELLTKIGLWRQVVSEFTGFGEFATAAPGTEEIGRLVEREIGDRDYPGTPPDEDELEDDEDC PCPACCAKRGQPPPEIREMVEQLGPDAVMQALAEILGGGGRKKRGRGRGPLDDLDVPL
Sequences:
>Translated_858_residues MSKKYSRLAAAVATTGVQPHERDRIAQLIASNRSDSAVDAAKAIHKRCNTPESESLLLDAYGARVRSLLERRLDREAAAL MDLVRERYPAAAAERLKQLTAVKAARNGDLSALLEPLKDPSLQPEKQAEIATLIRRNVVDLRALAECQALNADHPLRIAA AALWRAFEAVTSGPVPEEALALPEVARSSPLAPWKLLVRAIAAYYRKDDELCAKCLAAIEADSAAARLSPPLRKLIHLPQ NLTPAALELVNRVDGNFDFLRTRLKALDSALDRGNRPQILDEIRNAVAACSGAVPELMERLRQHISVRSLLEGLNAGTVA SAMGGSSLKNAHFWRLRARAHEEKNGEPGDIALACSCWEEFRKHAIREGWFPAKGPEVATLHLHMADLLQRLDEETLRNV RYRLQRQFDFHKADYRDQPPVLRILMPTHGNLAFLDSGLLLERACQADPCRENFARRLAYCAEIAPETCDTVAEQWAAAL PRDITPLLHLMRSAEQRDALQKAFGLMERAEKIDGVNPDVRRARLRLLAAIAVRHLRQNKPKLADKDLSQIEALPQSQQG DRPAFVAALRFVWCLARNAKDEADAAYAAAVRVLGDEATTQILFIEAARWCGRSDCKLAKSPRPRTTLVAALGRICALAD DVGMELATTADIWKQLETELSAPKISVNPRALEALGNLAMAAAQIPIAYALAGAGLAQGTESHAQFLFLRAQSLPPWEDE RRDLCLAAAAELARRRHDSELLTKIGLWRQVVSEFTGFGEFATAAPGTEEIGRLVEREIGDRDYPGTPPDEDELEDDEDC PCPACCAKRGQPPPEIREMVEQLGPDAVMQALAEILGGGGRKKRGRGRGPLDDLDVPL >Mature_857_residues SKKYSRLAAAVATTGVQPHERDRIAQLIASNRSDSAVDAAKAIHKRCNTPESESLLLDAYGARVRSLLERRLDREAAALM DLVRERYPAAAAERLKQLTAVKAARNGDLSALLEPLKDPSLQPEKQAEIATLIRRNVVDLRALAECQALNADHPLRIAAA ALWRAFEAVTSGPVPEEALALPEVARSSPLAPWKLLVRAIAAYYRKDDELCAKCLAAIEADSAAARLSPPLRKLIHLPQN LTPAALELVNRVDGNFDFLRTRLKALDSALDRGNRPQILDEIRNAVAACSGAVPELMERLRQHISVRSLLEGLNAGTVAS AMGGSSLKNAHFWRLRARAHEEKNGEPGDIALACSCWEEFRKHAIREGWFPAKGPEVATLHLHMADLLQRLDEETLRNVR YRLQRQFDFHKADYRDQPPVLRILMPTHGNLAFLDSGLLLERACQADPCRENFARRLAYCAEIAPETCDTVAEQWAAALP RDITPLLHLMRSAEQRDALQKAFGLMERAEKIDGVNPDVRRARLRLLAAIAVRHLRQNKPKLADKDLSQIEALPQSQQGD RPAFVAALRFVWCLARNAKDEADAAYAAAVRVLGDEATTQILFIEAARWCGRSDCKLAKSPRPRTTLVAALGRICALADD VGMELATTADIWKQLETELSAPKISVNPRALEALGNLAMAAAQIPIAYALAGAGLAQGTESHAQFLFLRAQSLPPWEDER RDLCLAAAAELARRRHDSELLTKIGLWRQVVSEFTGFGEFATAAPGTEEIGRLVEREIGDRDYPGTPPDEDELEDDEDCP CPACCAKRGQPPPEIREMVEQLGPDAVMQALAEILGGGGRKKRGRGRGPLDDLDVPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94386; Mature: 94255
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKYSRLAAAVATTGVQPHERDRIAQLIASNRSDSAVDAAKAIHKRCNTPESESLLLDA CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH YGARVRSLLERRLDREAAALMDLVRERYPAAAAERLKQLTAVKAARNGDLSALLEPLKDP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC SLQPEKQAEIATLIRRNVVDLRALAECQALNADHPLRIAAAALWRAFEAVTSGPVPEEAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH ALPEVARSSPLAPWKLLVRAIAAYYRKDDELCAKCLAAIEADSAAARLSPPLRKLIHLPQ HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCC NLTPAALELVNRVDGNFDFLRTRLKALDSALDRGNRPQILDEIRNAVAACSGAVPELMER CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH LRQHISVRSLLEGLNAGTVASAMGGSSLKNAHFWRLRARAHEEKNGEPGDIALACSCWEE HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHH FRKHAIREGWFPAKGPEVATLHLHMADLLQRLDEETLRNVRYRLQRQFDFHKADYRDQPP HHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VLRILMPTHGNLAFLDSGLLLERACQADPCRENFARRLAYCAEIAPETCDTVAEQWAAAL EEEEEECCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC PRDITPLLHLMRSAEQRDALQKAFGLMERAEKIDGVNPDVRRARLRLLAAIAVRHLRQNK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC PKLADKDLSQIEALPQSQQGDRPAFVAALRFVWCLARNAKDEADAAYAAAVRVLGDEATT CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH QILFIEAARWCGRSDCKLAKSPRPRTTLVAALGRICALADDVGMELATTADIWKQLETEL HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SAPKISVNPRALEALGNLAMAAAQIPIAYALAGAGLAQGTESHAQFLFLRAQSLPPWEDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCCCCCCHH RRDLCLAAAAELARRRHDSELLTKIGLWRQVVSEFTGFGEFATAAPGTEEIGRLVEREIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCC DRDYPGTPPDEDELEDDEDCPCPACCAKRGQPPPEIREMVEQLGPDAVMQALAEILGGGG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCC RKKRGRGRGPLDDLDVPL CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKYSRLAAAVATTGVQPHERDRIAQLIASNRSDSAVDAAKAIHKRCNTPESESLLLDA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH YGARVRSLLERRLDREAAALMDLVRERYPAAAAERLKQLTAVKAARNGDLSALLEPLKDP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC SLQPEKQAEIATLIRRNVVDLRALAECQALNADHPLRIAAAALWRAFEAVTSGPVPEEAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH ALPEVARSSPLAPWKLLVRAIAAYYRKDDELCAKCLAAIEADSAAARLSPPLRKLIHLPQ HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCC NLTPAALELVNRVDGNFDFLRTRLKALDSALDRGNRPQILDEIRNAVAACSGAVPELMER CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH LRQHISVRSLLEGLNAGTVASAMGGSSLKNAHFWRLRARAHEEKNGEPGDIALACSCWEE HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHH FRKHAIREGWFPAKGPEVATLHLHMADLLQRLDEETLRNVRYRLQRQFDFHKADYRDQPP HHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VLRILMPTHGNLAFLDSGLLLERACQADPCRENFARRLAYCAEIAPETCDTVAEQWAAAL EEEEEECCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC PRDITPLLHLMRSAEQRDALQKAFGLMERAEKIDGVNPDVRRARLRLLAAIAVRHLRQNK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC PKLADKDLSQIEALPQSQQGDRPAFVAALRFVWCLARNAKDEADAAYAAAVRVLGDEATT CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH QILFIEAARWCGRSDCKLAKSPRPRTTLVAALGRICALADDVGMELATTADIWKQLETEL HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SAPKISVNPRALEALGNLAMAAAQIPIAYALAGAGLAQGTESHAQFLFLRAQSLPPWEDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCCCCCCHH RRDLCLAAAAELARRRHDSELLTKIGLWRQVVSEFTGFGEFATAAPGTEEIGRLVEREIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCC DRDYPGTPPDEDELEDDEDCPCPACCAKRGQPPPEIREMVEQLGPDAVMQALAEILGGGG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCC RKKRGRGRGPLDDLDVPL CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA