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The map label for this gene is 116625346

Identifier: 116625346

GI number: 116625346

Start: 7910819

End: 7911694

Strand: Reverse

Name: 116625346

Synonym: Acid_6291

Alternate gene names: NA

Gene position: 7911694-7910819 (Counterclockwise)

Preceding gene: 116625352

Following gene: 116625345

Centisome position: 79.39

GC content: 62.56

Gene sequence:

>876_bases
GTGACCCCGAAGGAGGAATATTCTCGCGCCGATGTCCGCCGTAAGTTTGGTCTTTCCGAACGGCAATTGCAGAACTGGGA
ACGCCAGTCCCTGGTTCCCGCCGCGACGTTCTATTCGTTTTCCGACCTGATCGCCTTCCAAACCCTGATCAAACTCCGCG
AGAACAAGATCCCGATTCGCGAAATCGCGCGCGCCCTGCACTCCCTTCGCGAAAAATTGGACTGGGTCAAACATCCCCTG
GCCGAACTCCGTGTCGTCTCCGACGGCAAACGTATCGCGGTGCATGTGGCCGGCCAGAAGATGGAGGCCGTAACCGGCCA
GATCCTCTTTGATTTCGACGCCTCCGCGCTCGGCGGCCTCAAAAGCTTTCCCGACCGCAAGCCCAAGGTCAACCGCACCC
GCGAATCCGAAGTCTGGTTCCAGAAGGGCCTGGAGCTCGAGGAGACGGGCGCCCCCGTCGAGCACGCCGTCGACGCCTAT
AAGAAGGTGCTCGAGCTCAACCCGGGCGCCGCCGGAGCGCTGGTCAACCTCGGTACCATCTATTACCGCCTGCGCAAGTT
CGACGAAGCCGAAAAGTATTACCTCGATGCCATCACGGCCGACCCCATCTACCCCCTGGCCCAGTTCAACCTCGGCAATC
TCTACGATGAACAGGGCCGCCTGCCCGAAGCCTTCGGGTACTACCGCCGCGCCCTCAGCCTCAACCCCCAGTACGCCGAC
GCCCACTTCAACCTCGCGCTCCTCTGCGAACGGACCGGCGACCCGCTCAAGGCCGTCTACCACTGGAAGGCCTACCTCAA
GCTCGATGGCTCCGGCCAGTGGGCCGACATCGCCCGCCGCCAGCTCGAACGCCTCCGCCAAGCCGTAATCCGCTAA

Upstream 100 bases:

>100_bases
ATAAGCGAATCATACCGCAGTGGTAATCGCGTTTCAAGTACTTTTCGTGATAAAGGAAACGTGGCGTCGGAGATTAGGAA
CAGCCTGTTAAAATACTTGC

Downstream 100 bases:

>100_bases
GCTCCGCGAACCGCGACCGTCAGGGAGCGATCTAAAGTAAGATGCAATGAAGTGGTCCCCCTTCGAATCCTCGCGCTCTG
GGTAGCGACGGCGTCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Protein; O-Linked GlcNAc Transferase; TPR Domain-Containing Protein; Transcriptional Regulator MerR Family; O-GlcNAc Transferase; TPR Domain Protein; Methyltransferase Type; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; MerR Family Transcriptional Regulator; Regulatory Protein MerR; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTPKEEYSRADVRRKFGLSERQLQNWERQSLVPAATFYSFSDLIAFQTLIKLRENKIPIREIARALHSLREKLDWVKHPL
AELRVVSDGKRIAVHVAGQKMEAVTGQILFDFDASALGGLKSFPDRKPKVNRTRESEVWFQKGLELEETGAPVEHAVDAY
KKVLELNPGAAGALVNLGTIYYRLRKFDEAEKYYLDAITADPIYPLAQFNLGNLYDEQGRLPEAFGYYRRALSLNPQYAD
AHFNLALLCERTGDPLKAVYHWKAYLKLDGSGQWADIARRQLERLRQAVIR

Sequences:

>Translated_291_residues
MTPKEEYSRADVRRKFGLSERQLQNWERQSLVPAATFYSFSDLIAFQTLIKLRENKIPIREIARALHSLREKLDWVKHPL
AELRVVSDGKRIAVHVAGQKMEAVTGQILFDFDASALGGLKSFPDRKPKVNRTRESEVWFQKGLELEETGAPVEHAVDAY
KKVLELNPGAAGALVNLGTIYYRLRKFDEAEKYYLDAITADPIYPLAQFNLGNLYDEQGRLPEAFGYYRRALSLNPQYAD
AHFNLALLCERTGDPLKAVYHWKAYLKLDGSGQWADIARRQLERLRQAVIR
>Mature_290_residues
TPKEEYSRADVRRKFGLSERQLQNWERQSLVPAATFYSFSDLIAFQTLIKLRENKIPIREIARALHSLREKLDWVKHPLA
ELRVVSDGKRIAVHVAGQKMEAVTGQILFDFDASALGGLKSFPDRKPKVNRTRESEVWFQKGLELEETGAPVEHAVDAYK
KVLELNPGAAGALVNLGTIYYRLRKFDEAEKYYLDAITADPIYPLAQFNLGNLYDEQGRLPEAFGYYRRALSLNPQYADA
HFNLALLCERTGDPLKAVYHWKAYLKLDGSGQWADIARRQLERLRQAVIR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=116, Percent_Identity=36.2068965517241, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI32307150, Length=116, Percent_Identity=36.2068965517241, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=148, Percent_Identity=33.7837837837838, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=148, Percent_Identity=33.7837837837838, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17647755, Length=116, Percent_Identity=35.3448275862069, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585827, Length=116, Percent_Identity=35.3448275862069, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585829, Length=116, Percent_Identity=35.3448275862069, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33383; Mature: 33251

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKEEYSRADVRRKFGLSERQLQNWERQSLVPAATFYSFSDLIAFQTLIKLRENKIPIR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIARALHSLREKLDWVKHPLAELRVVSDGKRIAVHVAGQKMEAVTGQILFDFDASALGGL
HHHHHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEECCCHHHHHHCEEEEECCCHHHCCH
KSFPDRKPKVNRTRESEVWFQKGLELEETGAPVEHAVDAYKKVLELNPGAAGALVNLGTI
HCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YYRLRKFDEAEKYYLDAITADPIYPLAQFNLGNLYDEQGRLPEAFGYYRRALSLNPQYAD
HHHHHHHCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
AHFNLALLCERTGDPLKAVYHWKAYLKLDGSGQWADIARRQLERLRQAVIR
CCCCEEEEEECCCCHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPKEEYSRADVRRKFGLSERQLQNWERQSLVPAATFYSFSDLIAFQTLIKLRENKIPIR
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIARALHSLREKLDWVKHPLAELRVVSDGKRIAVHVAGQKMEAVTGQILFDFDASALGGL
HHHHHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEECCCHHHHHHCEEEEECCCHHHCCH
KSFPDRKPKVNRTRESEVWFQKGLELEETGAPVEHAVDAYKKVLELNPGAAGALVNLGTI
HCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YYRLRKFDEAEKYYLDAITADPIYPLAQFNLGNLYDEQGRLPEAFGYYRRALSLNPQYAD
HHHHHHHCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
AHFNLALLCERTGDPLKAVYHWKAYLKLDGSGQWADIARRQLERLRQAVIR
CCCCEEEEEECCCCHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA