Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625319

Identifier: 116625319

GI number: 116625319

Start: 7861760

End: 7862080

Strand: Reverse

Name: 116625319

Synonym: Acid_6264

Alternate gene names: NA

Gene position: 7862080-7861760 (Counterclockwise)

Preceding gene: 116625321

Following gene: 116625318

Centisome position: 78.89

GC content: 59.81

Gene sequence:

>321_bases
TTGCCTAAATACTTAATCCAGGCCAGGTATACAAGCGAGGGAATCCAAGGCCTGGTCAAAGACTCGGCTTCGGGACGGAG
GGCCGATGTGCAAGCGGCCGTCGGGGCACTCGGGGGAAAGGTCGAGGCGTTTTACTATACGTTCGGCGACGACGATGTAG
CCGCTATTTTCGATCTGCCCGACAACACTAAGGCGGCGGCCCTGGCCTTGAGCATCTCCGGGTCTGGCGCAGTGCGGGTG
CGCACCACACCTCTGCTGAGCGTGGAGGAAGTGGATCAGGCCCTCGAGATCAGAATGAAGTACCGCGCCCCCGGAAAATA
G

Upstream 100 bases:

>100_bases
ATCGATTCGTTTTTGCGCACCAGGAATTCCGAGGCGATCCTAACGCTTGACGGGATCGGACTTCCGCACTACTCTTGCAA
CGTGAAAGGGGGGCTGTCCA

Downstream 100 bases:

>100_bases
CCGAGAGGCCGGATGAGGACGTTCCGCGACTGCGGCGAGGCATAGTCACTCTGAGGATTGTTGCAGGGGGGGCGGCCCGC
ACCAGCTGTGCGGCCTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPKYLIQARYTSEGIQGLVKDSASGRRADVQAAVGALGGKVEAFYYTFGDDDVAAIFDLPDNTKAAALALSISGSGAVRV
RTTPLLSVEEVDQALEIRMKYRAPGK

Sequences:

>Translated_106_residues
MPKYLIQARYTSEGIQGLVKDSASGRRADVQAAVGALGGKVEAFYYTFGDDDVAAIFDLPDNTKAAALALSISGSGAVRV
RTTPLLSVEEVDQALEIRMKYRAPGK
>Mature_105_residues
PKYLIQARYTSEGIQGLVKDSASGRRADVQAAVGALGGKVEAFYYTFGDDDVAAIFDLPDNTKAAALALSISGSGAVRVR
TTPLLSVEEVDQALEIRMKYRAPGK

Specific function: Unknown

COG id: COG4274

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11281; Mature: 11150

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKYLIQARYTSEGIQGLVKDSASGRRADVQAAVGALGGKVEAFYYTFGDDDVAAIFDLP
CCCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEEEEECC
DNTKAAALALSISGSGAVRVRTTPLLSVEEVDQALEIRMKYRAPGK
CCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
PKYLIQARYTSEGIQGLVKDSASGRRADVQAAVGALGGKVEAFYYTFGDDDVAAIFDLP
CCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEEEEECC
DNTKAAALALSISGSGAVRVRTTPLLSVEEVDQALEIRMKYRAPGK
CCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA