| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625250
Identifier: 116625250
GI number: 116625250
Start: 7771716
End: 7772315
Strand: Reverse
Name: 116625250
Synonym: Acid_6195
Alternate gene names: NA
Gene position: 7772315-7771716 (Counterclockwise)
Preceding gene: 116625251
Following gene: 116625246
Centisome position: 77.99
GC content: 59.17
Gene sequence:
>600_bases ATGATGTTCGCTCCAGGCAGAGCGCTGCCGCTGCTTGCAATTCTGTTGTGCGCCTCGTCCCTGAATGCGCAGCCGGATCT CTGGGAGCATTTGCGGCATGCCGGCATCCTCCAAATCGCACCGCAAGACCGTAATATCATGCTGCCCCGATCGCAGCGGG AATCCGTCGCCAGGGTGCTCAAGGCCCGGACTGATGTTTGGGCATGCGCCGACGACGATCCCAAAGGTGAATGGCTTGGA AATCTGAAGTACACAATCATTCCGGTCTCGCCAGCGGCCAAGGTATTTCTGGTTGAAGCGGGGCCCGGTTGCGCCCGTGG CGGCCAAGGTTCAAACGGGGCGATGTGGGTGATTCGCTTCGAGGGCCGCGTGCCCATCGTTCTTGCCGACCCTGAGGACG ATTTTGCGGGGTTCCTCTATTCCATCGGACCAACCCCGCACAAGGGATACCGGGACATCATCCTCGGATGGCACATGAGC GCAATGGAAACGGGCCTGGCCTATTTTCGATTCGACGGTAAGTCTTATCGCCGCATCGGCTCCGCAACCCTCTATTCCGA CGACGATGCCGGTCCGCGAATCATTCCACATCACTTCTAG
Upstream 100 bases:
>100_bases GTCACGGCGCCAGGTTAGTAAGTAGCCCCATTCCGCCGCGCGCGGGGTGGGGCATTTTTGTGGGCAACCACAGAACCGGC CACGGTATATCCTGGTCTGG
Downstream 100 bases:
>100_bases AGGCAGGCGGCCCATTCCGCCGTACGCGTGTTACTCATAGCGCAAAGCGGTGAGTGGGTCTACCCTGGCTGCGCGGAGGG CAGGCAGCGCGGAAGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MMFAPGRALPLLAILLCASSLNAQPDLWEHLRHAGILQIAPQDRNIMLPRSQRESVARVLKARTDVWACADDDPKGEWLG NLKYTIIPVSPAAKVFLVEAGPGCARGGQGSNGAMWVIRFEGRVPIVLADPEDDFAGFLYSIGPTPHKGYRDIILGWHMS AMETGLAYFRFDGKSYRRIGSATLYSDDDAGPRIIPHHF
Sequences:
>Translated_199_residues MMFAPGRALPLLAILLCASSLNAQPDLWEHLRHAGILQIAPQDRNIMLPRSQRESVARVLKARTDVWACADDDPKGEWLG NLKYTIIPVSPAAKVFLVEAGPGCARGGQGSNGAMWVIRFEGRVPIVLADPEDDFAGFLYSIGPTPHKGYRDIILGWHMS AMETGLAYFRFDGKSYRRIGSATLYSDDDAGPRIIPHHF >Mature_199_residues MMFAPGRALPLLAILLCASSLNAQPDLWEHLRHAGILQIAPQDRNIMLPRSQRESVARVLKARTDVWACADDDPKGEWLG NLKYTIIPVSPAAKVFLVEAGPGCARGGQGSNGAMWVIRFEGRVPIVLADPEDDFAGFLYSIGPTPHKGYRDIILGWHMS AMETGLAYFRFDGKSYRRIGSATLYSDDDAGPRIIPHHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21943; Mature: 21943
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFAPGRALPLLAILLCASSLNAQPDLWEHLRHAGILQIAPQDRNIMLPRSQRESVARVL CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCCEECCCHHHHHHHHHH KARTDVWACADDDPKGEWLGNLKYTIIPVSPAAKVFLVEAGPGCARGGQGSNGAMWVIRF HHCCCEEEECCCCCCCCEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEE EGRVPIVLADPEDDFAGFLYSIGPTPHKGYRDIILGWHMSAMETGLAYFRFDGKSYRRIG CCCEEEEEECCCCCHHEEEEECCCCCCCCCEEEEEECCHHHHHCCEEEEEECCHHHHHCC SATLYSDDDAGPRIIPHHF CEEEECCCCCCCEECCCCC >Mature Secondary Structure MMFAPGRALPLLAILLCASSLNAQPDLWEHLRHAGILQIAPQDRNIMLPRSQRESVARVL CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCCEECCCHHHHHHHHHH KARTDVWACADDDPKGEWLGNLKYTIIPVSPAAKVFLVEAGPGCARGGQGSNGAMWVIRF HHCCCEEEECCCCCCCCEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEE EGRVPIVLADPEDDFAGFLYSIGPTPHKGYRDIILGWHMSAMETGLAYFRFDGKSYRRIG CCCEEEEEECCCCCHHEEEEECCCCCCCCCEEEEEECCHHHHHCCEEEEEECCHHHHHCC SATLYSDDDAGPRIIPHHF CEEEECCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA