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The map label for this gene is pinE [C]

Identifier: 116625180

GI number: 116625180

Start: 7657716

End: 7658357

Strand: Direct

Name: pinE [C]

Synonym: Acid_6125

Alternate gene names: 116625180

Gene position: 7657716-7658357 (Clockwise)

Preceding gene: 116625179

Following gene: 116625181

Centisome position: 76.84

GC content: 64.33

Gene sequence:

>642_bases
GTGGCCGCCAGGCGGGCAGTTGAGAAGGCAAAATCGCCCAAGGTTTTTGGCCAGGCACGGAAACCGGCGAAAATGTTTCG
CGCCGGCCTCTACGCCCGAGTCTCCACGAACGACCAACAGACCGTCCCTTTGCAGATCCGCGCTCTGCGTGAATACACGG
TCCGGCGAGGTTGGACGATTGCTCTACAGGTGAAGGAGGTCGGGAGCGGTGCGTCGCAACGGCAACTGCGAGAGAAGTTG
CTGGAGGCCGCACGCCGCCGCGAGATCGACGTGGTGCTGGTGTGGCGTTTGGATCGTTGGGGCCGATCCGTGTCGGACCT
GCTGGCAACCCTGCAGGAACTGGAGCACCTCGGTGTCGGTTTCGTCTCGCTGACGGAGGCGTTGGACCTGACGACGCCGG
CCGGTCGCGCCATGGCCGCGCTGCTGGCTGTATTCGCGGAGTTCGAAAGAGAAATTCTGCGGGAACGGGTGCGCGCCGAT
CTGGCCCACGCCCGACAGAACGGCAAGAAACTGGGCCGGCCGGCAACCGCGGCGCGGCACGCTTCTGAAATCCTCAAGCT
ACATCGCGCCGGCGTCAGCAAATCTGAGATCGCCCGCAGGTTGGAGATCGGCCGCACCTCCGTTCGCCGGATCTTGGCAT
GA

Upstream 100 bases:

>100_bases
CTACCGCGAGAGGCTGGCACACGCTCCTCCTGGGTAATATCATGGGTTCATGTCTGGCCGAAAAGGATAGTCTTAGGCCA
AGCAGAAAGGACACCGCGAA

Downstream 100 bases:

>100_bases
TGCCGGATCGGCGCCAAAATATTGGGATGCTGCTGCAACCCCATCCGTTGCTCTGGACGGCCATCGAGAACACGCGTATG
ATTCGGTTTGCCTACCATGG

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MAARRAVEKAKSPKVFGQARKPAKMFRAGLYARVSTNDQQTVPLQIRALREYTVRRGWTIALQVKEVGSGASQRQLREKL
LEAARRREIDVVLVWRLDRWGRSVSDLLATLQELEHLGVGFVSLTEALDLTTPAGRAMAALLAVFAEFEREILRERVRAD
LAHARQNGKKLGRPATAARHASEILKLHRAGVSKSEIARRLEIGRTSVRRILA

Sequences:

>Translated_213_residues
MAARRAVEKAKSPKVFGQARKPAKMFRAGLYARVSTNDQQTVPLQIRALREYTVRRGWTIALQVKEVGSGASQRQLREKL
LEAARRREIDVVLVWRLDRWGRSVSDLLATLQELEHLGVGFVSLTEALDLTTPAGRAMAALLAVFAEFEREILRERVRAD
LAHARQNGKKLGRPATAARHASEILKLHRAGVSKSEIARRLEIGRTSVRRILA
>Mature_212_residues
AARRAVEKAKSPKVFGQARKPAKMFRAGLYARVSTNDQQTVPLQIRALREYTVRRGWTIALQVKEVGSGASQRQLREKLL
EAARRREIDVVLVWRLDRWGRSVSDLLATLQELEHLGVGFVSLTEALDLTTPAGRAMAALLAVFAEFEREILRERVRADL
AHARQNGKKLGRPATAARHASEILKLHRAGVSKSEIARRLEIGRTSVRRILA

Specific function: Site-specific recombination protein [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=181, Percent_Identity=34.8066298342541, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787638, Length=193, Percent_Identity=32.6424870466321, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787827, Length=187, Percent_Identity=32.620320855615, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 23903; Mature: 23772

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARRAVEKAKSPKVFGQARKPAKMFRAGLYARVSTNDQQTVPLQIRALREYTVRRGWTI
CCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCEE
ALQVKEVGSGASQRQLREKLLEAARRREIDVVLVWRLDRWGRSVSDLLATLQELEHLGVG
EEEEHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCHHHHHHHHHHHHHHCCH
FVSLTEALDLTTPAGRAMAALLAVFAEFEREILRERVRADLAHARQNGKKLGRPATAARH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ASEILKLHRAGVSKSEIARRLEIGRTSVRRILA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AARRAVEKAKSPKVFGQARKPAKMFRAGLYARVSTNDQQTVPLQIRALREYTVRRGWTI
CHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCEE
ALQVKEVGSGASQRQLREKLLEAARRREIDVVLVWRLDRWGRSVSDLLATLQELEHLGVG
EEEEHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCHHHHHHHHHHHHHHCCH
FVSLTEALDLTTPAGRAMAALLAVFAEFEREILRERVRADLAHARQNGKKLGRPATAARH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ASEILKLHRAGVSKSEIARRLEIGRTSVRRILA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1331988 [H]