| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is fhuA [C]
Identifier: 116625174
GI number: 116625174
Start: 7649902
End: 7652532
Strand: Reverse
Name: fhuA [C]
Synonym: Acid_6118
Alternate gene names: 116625174
Gene position: 7652532-7649902 (Counterclockwise)
Preceding gene: 116625175
Following gene: 116625173
Centisome position: 76.79
GC content: 59.29
Gene sequence:
>2631_bases ATGCAGATGCTGCGTCACGACATCGCGTTTCTGTGCACCGGTTTGGTGCGCCTATCGGCAATTACTCTTTTCACCATCAC GGCGGCATTTTCCCAGATGTCGTCCATCTCAGGCACCGTCAAGGATCAGAGCGGCGCAAGTGTGGCCAGCGCCATGGTTG CGATCACCGACGATGCTACCAAAACCAAGAAAACCAAGCTCTCGGATGTCTCCGGCGCCTATGAGTTTACAGGCATCGCA CCCGGGGGCTACAAGGTGGACGTGCAGGCACCGGGCTTCACCACGTTCCTGAAGGACGTCACAGTCGCGGGTACGCCGCT GCAGTTCGATATCAGCCTGGAACTCGGGCACGACGCGACGCAGGTTGCCGTCGAAGGGCGGATCGACCCCTACAACGTGG TGCCTTCGGTGCCGACGCAGAGCATCTTCGGTTTCGATCAGACGATCGAGGACATTCCGCGGTCCATCTCCGTGGCGGAT GCCGAGACGATGCTGCGCTACGGCGTAAAAACGGTCAACGATATTGTCTCCGTGTCTTCGGGGTCGTTCACGGGCAGCTA CTTCGGCATCCCGGGCAGCGTGTTTCTCCGGGGCGACATCGGCGACAACTTCTTCCGTGGATTCCGGCGCGTGGAGAACC GCGGCAATTTCCAGACGCCGGTGGCTGCGACGGATCACATCGAAGTCGTCAAGGGTCCGCCTTCGCCGATTTATGGCGGG GGCCGGGTCGGCGGGTTCCTCAACTTCATACCCAAGAGCACGCGCAGCGAAAGCGCGAAGTGGCTAGAGCACGTTACTGG AAAAGTCACGGTGACGTACGGAAGCTATGACGAGAAGCGCGGGAGCACCGAAGTGGGAGTGCCGTTCAAAGTCGGCACGC ACCGCGCCGGCGTGTACGCGTTCTTCGAGGCTGAGGACTCGCACAGCTTCTATAAAGGGGTCGCCAACCGCTATAAGCTC GGACAAATCTCCGCCGATCTGGAACTCTCGCCAAAACTGCGCCTAGTCTACGGATTCCAGGGCTTCCACAATGAAGGCAC GCAGAATATCGGGTGGAACCGGGTCACGCAGGATCTGGTGGACAAGCAACTCTACCTCTCCGGCAGTCCGCTGGTGAATC TCTCGCACAACGGCTACGACATCCGCGCCGGCGATATCCCGCCGGGCACGCTGACCAGCTTTGCCTTCCAGAAAGACATG TCCGGCCCGTTCTTCAGCGATCCGAAAACGGCGAGCCTGTACGCGCTCAATCCCGCGACGGAGAAGCTGGTGACGCTGCC GCTGGACCGGATCATGATCGACGCCGGCGATTTCAGCCGCGCCACCACGACGACCGCCTACTTCGATGTCAACTACGACT TCAACGATGAGATTCACTTCAAGAACCAGAGCTTCATGGATTGGATGAATCACCAGAAGTTCAGCAGCTACGGCTTCGGG GCGGGTTACCGTCCGTGGACCATGGAGAATAAGACCACGATTGGTTTCGATGTGAAACCGGCCAAATGGATGGTGGTTCA TTCGCTGGCGGGTTTCAGTTACCGGAAGGTGACGGTCAGCGCCGGCGAAGAGCGTAACGATTTTCAGGTTGTAGACCGCC GCGATCTCTCGGTGGGCGCAACGCCCAACGATCGTTTCGCCGGACCTTACAACAGCAACGGGCAGATCACCTATCAGTAT TTCCAGACTGGTAACTATGGCGACACTGGCCTGTTCTGGCTGGGCGACGCGGTCCTCTTCGACAAACTCATGTTCACCAC CGGTGTTCGCTTCGACCGTTACACGCCCGATTTCACGGGGCGGGACTTCGGCGAAACCAACACCCGCGCTACCGCGCGGC AGAATGCCACGACTTACAACGCCAGCGTAAGTTATCGCCTTCCCTATCACCTGACGCCGTACTTCACGGCCGCTACGTCA CGATTTCTCGACCTGGGTCAGGGCAACGAACTGGATTACTCGCAGGTGCAGAACGGCACTTTCATCCAGACATCCAACCT GTATGAAGGCGGCGTCAAGACTTCGCTCGGGCAGAAGCTCTTCGCCTCCGCGTCCATCTTCCGCCAGAACCGCGCGTCAT ACAACAACCTGACCAGGGCAGACGATTACTATCGCACCACTGGCGCGGAGTTCGAAGCCCGCTCCTACCTGATGCGCCGT CTCAGCCTGACGGCCGCATTGACGTGGCAGAAACCGGAGCAACTCAACGTGCCGTTTCTACTTGGAATTCCGCCCAGCCT GCTGGGCATCGACCCGGTGAAGGCCTACGCGGGCCGCTTCATCGGCGACGCCAGCATATTCGGCTTGAAAGCGCCGCTGC CGGTGGGCGGACAGCCGCACGTGGTGTTCAGCCCGTTCGCCACGGTCAACGTCACGAAACAGGTGGGCTTCACGCTCGGC ACATCCTGGGTTGCGTCGGTGAAGACCGGCTATATCAGCGATGTGAAGCTGCCCTCGTACGCGCTGACCCGCGGCTCCGT GTTCTACCAGCAGGGCAAACACTTGTTCAACGTAGGCATCAACAACATGTTCGATAAGACCTACTTCCAGAGCCAGTTCC TGTTCTGGGACGTGTTTATCAAACCGGGCGCCCTGAGGACGGCGAGCCTGACGTATACGCTGACATTCTAA
Upstream 100 bases:
>100_bases ACCGATTCGTACTGCAAGACAGTGACCGGTTTCGATGGGTTTGGCCTCCTGATTCGGCTCCTATTAAAGGGACTCTGATC AATCAATCCAGGGGAGGACT
Downstream 100 bases:
>100_bases ACCAAGACCATGATTAACCAACCCGAAACAATCGCGACGATCGCGGCGCTCCACGAGGAGTACGAGGCGGCTCTGATTTC CAACGACGTGGGGAAGCTGA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB Dependent Receptor; NB-Dependent Receptor Plug; Outer Membrane Protein; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Receptor Plug
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MQMLRHDIAFLCTGLVRLSAITLFTITAAFSQMSSISGTVKDQSGASVASAMVAITDDATKTKKTKLSDVSGAYEFTGIA PGGYKVDVQAPGFTTFLKDVTVAGTPLQFDISLELGHDATQVAVEGRIDPYNVVPSVPTQSIFGFDQTIEDIPRSISVAD AETMLRYGVKTVNDIVSVSSGSFTGSYFGIPGSVFLRGDIGDNFFRGFRRVENRGNFQTPVAATDHIEVVKGPPSPIYGG GRVGGFLNFIPKSTRSESAKWLEHVTGKVTVTYGSYDEKRGSTEVGVPFKVGTHRAGVYAFFEAEDSHSFYKGVANRYKL GQISADLELSPKLRLVYGFQGFHNEGTQNIGWNRVTQDLVDKQLYLSGSPLVNLSHNGYDIRAGDIPPGTLTSFAFQKDM SGPFFSDPKTASLYALNPATEKLVTLPLDRIMIDAGDFSRATTTTAYFDVNYDFNDEIHFKNQSFMDWMNHQKFSSYGFG AGYRPWTMENKTTIGFDVKPAKWMVVHSLAGFSYRKVTVSAGEERNDFQVVDRRDLSVGATPNDRFAGPYNSNGQITYQY FQTGNYGDTGLFWLGDAVLFDKLMFTTGVRFDRYTPDFTGRDFGETNTRATARQNATTYNASVSYRLPYHLTPYFTAATS RFLDLGQGNELDYSQVQNGTFIQTSNLYEGGVKTSLGQKLFASASIFRQNRASYNNLTRADDYYRTTGAEFEARSYLMRR LSLTAALTWQKPEQLNVPFLLGIPPSLLGIDPVKAYAGRFIGDASIFGLKAPLPVGGQPHVVFSPFATVNVTKQVGFTLG TSWVASVKTGYISDVKLPSYALTRGSVFYQQGKHLFNVGINNMFDKTYFQSQFLFWDVFIKPGALRTASLTYTLTF
Sequences:
>Translated_876_residues MQMLRHDIAFLCTGLVRLSAITLFTITAAFSQMSSISGTVKDQSGASVASAMVAITDDATKTKKTKLSDVSGAYEFTGIA PGGYKVDVQAPGFTTFLKDVTVAGTPLQFDISLELGHDATQVAVEGRIDPYNVVPSVPTQSIFGFDQTIEDIPRSISVAD AETMLRYGVKTVNDIVSVSSGSFTGSYFGIPGSVFLRGDIGDNFFRGFRRVENRGNFQTPVAATDHIEVVKGPPSPIYGG GRVGGFLNFIPKSTRSESAKWLEHVTGKVTVTYGSYDEKRGSTEVGVPFKVGTHRAGVYAFFEAEDSHSFYKGVANRYKL GQISADLELSPKLRLVYGFQGFHNEGTQNIGWNRVTQDLVDKQLYLSGSPLVNLSHNGYDIRAGDIPPGTLTSFAFQKDM SGPFFSDPKTASLYALNPATEKLVTLPLDRIMIDAGDFSRATTTTAYFDVNYDFNDEIHFKNQSFMDWMNHQKFSSYGFG AGYRPWTMENKTTIGFDVKPAKWMVVHSLAGFSYRKVTVSAGEERNDFQVVDRRDLSVGATPNDRFAGPYNSNGQITYQY FQTGNYGDTGLFWLGDAVLFDKLMFTTGVRFDRYTPDFTGRDFGETNTRATARQNATTYNASVSYRLPYHLTPYFTAATS RFLDLGQGNELDYSQVQNGTFIQTSNLYEGGVKTSLGQKLFASASIFRQNRASYNNLTRADDYYRTTGAEFEARSYLMRR LSLTAALTWQKPEQLNVPFLLGIPPSLLGIDPVKAYAGRFIGDASIFGLKAPLPVGGQPHVVFSPFATVNVTKQVGFTLG TSWVASVKTGYISDVKLPSYALTRGSVFYQQGKHLFNVGINNMFDKTYFQSQFLFWDVFIKPGALRTASLTYTLTF >Mature_876_residues MQMLRHDIAFLCTGLVRLSAITLFTITAAFSQMSSISGTVKDQSGASVASAMVAITDDATKTKKTKLSDVSGAYEFTGIA PGGYKVDVQAPGFTTFLKDVTVAGTPLQFDISLELGHDATQVAVEGRIDPYNVVPSVPTQSIFGFDQTIEDIPRSISVAD AETMLRYGVKTVNDIVSVSSGSFTGSYFGIPGSVFLRGDIGDNFFRGFRRVENRGNFQTPVAATDHIEVVKGPPSPIYGG GRVGGFLNFIPKSTRSESAKWLEHVTGKVTVTYGSYDEKRGSTEVGVPFKVGTHRAGVYAFFEAEDSHSFYKGVANRYKL GQISADLELSPKLRLVYGFQGFHNEGTQNIGWNRVTQDLVDKQLYLSGSPLVNLSHNGYDIRAGDIPPGTLTSFAFQKDM SGPFFSDPKTASLYALNPATEKLVTLPLDRIMIDAGDFSRATTTTAYFDVNYDFNDEIHFKNQSFMDWMNHQKFSSYGFG AGYRPWTMENKTTIGFDVKPAKWMVVHSLAGFSYRKVTVSAGEERNDFQVVDRRDLSVGATPNDRFAGPYNSNGQITYQY FQTGNYGDTGLFWLGDAVLFDKLMFTTGVRFDRYTPDFTGRDFGETNTRATARQNATTYNASVSYRLPYHLTPYFTAATS RFLDLGQGNELDYSQVQNGTFIQTSNLYEGGVKTSLGQKLFASASIFRQNRASYNNLTRADDYYRTTGAEFEARSYLMRR LSLTAALTWQKPEQLNVPFLLGIPPSLLGIDPVKAYAGRFIGDASIFGLKAPLPVGGQPHVVFSPFATVNVTKQVGFTLG TSWVASVKTGYISDVKLPSYALTRGSVFYQQGKHLFNVGINNMFDKTYFQSQFLFWDVFIKPGALRTASLTYTLTF
Specific function: This Receptor Binds The Ferrichrome-Iron Ligand. It Interacts With The Tonb Protein, Which Is Responsible For Energy Coupling Of The Ferrichrome-Promoted Iron Transport System. Acts As A Receptor For Bacteriophage T5 As Well As T1, Phi80 And Colicin M. B
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96672; Mature: 96672
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMLRHDIAFLCTGLVRLSAITLFTITAAFSQMSSISGTVKDQSGASVASAMVAITDDAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCC KTKKTKLSDVSGAYEFTGIAPGGYKVDVQAPGFTTFLKDVTVAGTPLQFDISLELGHDAT CCHHHECCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHEECCCCEEEEEEEEECCCCE QVAVEGRIDPYNVVPSVPTQSIFGFDQTIEDIPRSISVADAETMLRYGVKTVNDIVSVSS EEEEECCCCCCCCCCCCCCHHHCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCC GSFTGSYFGIPGSVFLRGDIGDNFFRGFRRVENRGNFQTPVAATDHIEVVKGPPSPIYGG CCCCCEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCC GRVGGFLNFIPKSTRSESAKWLEHVTGKVTVTYGSYDEKRGSTEVGVPFKVGTHRAGVYA CCCCHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEE FFEAEDSHSFYKGVANRYKLGQISADLELSPKLRLVYGFQGFHNEGTQNIGWNRVTQDLV EEECCCCCHHHHHHHCCEEECEEECCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH DKQLYLSGSPLVNLSHNGYDIRAGDIPPGTLTSFAFQKDMSGPFFSDPKTASLYALNPAT HHEEEECCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCC EKLVTLPLDRIMIDAGDFSRATTTTAYFDVNYDFNDEIHFKNQSFMDWMNHQKFSSYGFG CEEEEEECHHEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCHHHHHHHCCCCCCCCCC AGYRPWTMENKTTIGFDVKPAKWMVVHSLAGFSYRKVTVSAGEERNDFQVVDRRDLSVGA CCCCCEECCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCEECC TPNDRFAGPYNSNGQITYQYFQTGNYGDTGLFWLGDAVLFDKLMFTTGVRFDRYTPDFTG CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCC RDFGETNTRATARQNATTYNASVSYRLPYHLTPYFTAATSRFLDLGQGNELDYSQVQNGT CCCCCCCCCCHHHCCCEEEECEEEEECCEECCCHHHHHHHHHHCCCCCCCCCHHHCCCCC FIQTSNLYEGGVKTSLGQKLFASASIFRQNRASYNNLTRADDYYRTTGAEFEARSYLMRR EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHH LSLTAALTWQKPEQLNVPFLLGIPPSLLGIDPVKAYAGRFIGDASIFGLKAPLPVGGQPH HHHHEEEEECCCCCCCCCEEECCCHHHCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCC VVFSPFATVNVTKQVGFTLGTSWVASVKTGYISDVKLPSYALTRGSVFYQQGKHLFNVGI EEECCCEEEEEHHHHCEEECCHHHHHHCCCCEECCCCCCEEECCCEEEHHCCCEEEECCC NNMFDKTYFQSQFLFWDVFIKPGALRTASLTYTLTF CHHHHHHHHHCEEEEEEEEECCCCEEEEEEEEEEEC >Mature Secondary Structure MQMLRHDIAFLCTGLVRLSAITLFTITAAFSQMSSISGTVKDQSGASVASAMVAITDDAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCC KTKKTKLSDVSGAYEFTGIAPGGYKVDVQAPGFTTFLKDVTVAGTPLQFDISLELGHDAT CCHHHECCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHEECCCCEEEEEEEEECCCCE QVAVEGRIDPYNVVPSVPTQSIFGFDQTIEDIPRSISVADAETMLRYGVKTVNDIVSVSS EEEEECCCCCCCCCCCCCCHHHCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCC GSFTGSYFGIPGSVFLRGDIGDNFFRGFRRVENRGNFQTPVAATDHIEVVKGPPSPIYGG CCCCCEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCC GRVGGFLNFIPKSTRSESAKWLEHVTGKVTVTYGSYDEKRGSTEVGVPFKVGTHRAGVYA CCCCHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEE FFEAEDSHSFYKGVANRYKLGQISADLELSPKLRLVYGFQGFHNEGTQNIGWNRVTQDLV EEECCCCCHHHHHHHCCEEECEEECCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH DKQLYLSGSPLVNLSHNGYDIRAGDIPPGTLTSFAFQKDMSGPFFSDPKTASLYALNPAT HHEEEECCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCC EKLVTLPLDRIMIDAGDFSRATTTTAYFDVNYDFNDEIHFKNQSFMDWMNHQKFSSYGFG CEEEEEECHHEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCHHHHHHHCCCCCCCCCC AGYRPWTMENKTTIGFDVKPAKWMVVHSLAGFSYRKVTVSAGEERNDFQVVDRRDLSVGA CCCCCEECCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCEECC TPNDRFAGPYNSNGQITYQYFQTGNYGDTGLFWLGDAVLFDKLMFTTGVRFDRYTPDFTG CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCC RDFGETNTRATARQNATTYNASVSYRLPYHLTPYFTAATSRFLDLGQGNELDYSQVQNGT CCCCCCCCCCHHHCCCEEEECEEEEECCEECCCHHHHHHHHHHCCCCCCCCCHHHCCCCC FIQTSNLYEGGVKTSLGQKLFASASIFRQNRASYNNLTRADDYYRTTGAEFEARSYLMRR EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHH LSLTAALTWQKPEQLNVPFLLGIPPSLLGIDPVKAYAGRFIGDASIFGLKAPLPVGGQPH HHHHEEEEECCCCCCCCCEEECCCHHHCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCC VVFSPFATVNVTKQVGFTLGTSWVASVKTGYISDVKLPSYALTRGSVFYQQGKHLFNVGI EEECCCEEEEEHHHHCEEECCHHHHHHCCCCEECCCCCCEEECCCEEEHHCCCEEEECCC NNMFDKTYFQSQFLFWDVFIKPGALRTASLTYTLTF CHHHHHHHHHCEEEEEEEEECCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA