| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625161
Identifier: 116625161
GI number: 116625161
Start: 7633240
End: 7634262
Strand: Direct
Name: 116625161
Synonym: Acid_6104
Alternate gene names: NA
Gene position: 7633240-7634262 (Clockwise)
Preceding gene: 116625158
Following gene: 116625164
Centisome position: 76.6
GC content: 57.48
Gene sequence:
>1023_bases ATGACCTGTACGTCTCGAAGTCTGCTTGGGCTGACTATATTGACGGTTTGCTGCGGGCGCCCCGAACCGCTGCATGGCTC CCAGATTGTGACAAATCCCTTTGTCGGCGTGACCCTTATCACGCGAACCGAAACCTCGCCGCGTGCGGAAACCATGCACA TCGCGGAGATTAATTTGAACGCGCCGGGGATTGGAGTCAAGCTTACGTCGCCAGGCGGCACGCTCGAAACGGTCAGGCAG ACTACGCTCGATTACCTCAATCAGGAGCATGCGCAGTTAGCCATCAACGGCGAATTCTTTCTCCCATTCCCATCCTCCGA CTTCAATTCCATGCTCATTGGGCTGGCCGCTTCGAATGGCAATGTTTACTCGTCGTTCGAGGCGCCCGTTCAATCCTATG CGATCGTCACCGATGCCCCGGCCCTCAACATCGATCAGTCCAATCACGCCAGCATCGTACATGACAACACCAGTTTCGTC GACGGGAAACATGTGCTGGAAAACGTGACCTTGTGGAATACTATAGCCGGCTCGGCTCAGATCATTACAAACGGAGTCGC GAGTATTCCGACGTACCTCGACGCCACGCACCCCAACGGCCTCCTCACTCCAGGAGGGCCCGCATCCTACTCGAATAGCA ACTCCTGGTATAACCTCATCAACGCCCGTACCGTGATCGGCCTGTCGCAGGATAACCAGACTCTGTTCCTATTTACGGTG GACAATGCGGGCGGAAGCAGGGGGATGACGCTGCCAGAGGTCGCGAATCTGCTGATTGGCGATTATAGTATCTACAACGC GCTGAATCTGGACGGCGGCGGTTCGACCAGCATGGCTATGCAAGACCCGGTGACGGGGATGGGCAGATTCATCAATGTGT CGTCGGACAACCCCTCCGGTCGCGCGGAGGGCAGCAACCTAGCCATCTTCGCCATCGACGCCCCCGAGCCAGCAGGAATG CTGGTGGGCGGGTTTGTCGTCATTATGGTCCTGCGACGCAAGGTGGAGTCGCGGGCGCGATGA
Upstream 100 bases:
>100_bases GTGTCGCCACTGACACTTGGTTGGGGAAGTCCCTGCAAGATGGAAATCCCGGTTGGTGTCGGCAGGAGTATACTACCTCC GTGCTCAGAGGGAGGCGAAG
Downstream 100 bases:
>100_bases ATCGAGTTTGAATAAGCATGTAACCCAGACTCATTATCCAGGCGCGCAAGCATCGGCCGGGTGCATAACCGTTGCGCAAC GTCTCGATCTTTTCCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTCTSRSLLGLTILTVCCGRPEPLHGSQIVTNPFVGVTLITRTETSPRAETMHIAEINLNAPGIGVKLTSPGGTLETVRQ TTLDYLNQEHAQLAINGEFFLPFPSSDFNSMLIGLAASNGNVYSSFEAPVQSYAIVTDAPALNIDQSNHASIVHDNTSFV DGKHVLENVTLWNTIAGSAQIITNGVASIPTYLDATHPNGLLTPGGPASYSNSNSWYNLINARTVIGLSQDNQTLFLFTV DNAGGSRGMTLPEVANLLIGDYSIYNALNLDGGGSTSMAMQDPVTGMGRFINVSSDNPSGRAEGSNLAIFAIDAPEPAGM LVGGFVVIMVLRRKVESRAR
Sequences:
>Translated_340_residues MTCTSRSLLGLTILTVCCGRPEPLHGSQIVTNPFVGVTLITRTETSPRAETMHIAEINLNAPGIGVKLTSPGGTLETVRQ TTLDYLNQEHAQLAINGEFFLPFPSSDFNSMLIGLAASNGNVYSSFEAPVQSYAIVTDAPALNIDQSNHASIVHDNTSFV DGKHVLENVTLWNTIAGSAQIITNGVASIPTYLDATHPNGLLTPGGPASYSNSNSWYNLINARTVIGLSQDNQTLFLFTV DNAGGSRGMTLPEVANLLIGDYSIYNALNLDGGGSTSMAMQDPVTGMGRFINVSSDNPSGRAEGSNLAIFAIDAPEPAGM LVGGFVVIMVLRRKVESRAR >Mature_339_residues TCTSRSLLGLTILTVCCGRPEPLHGSQIVTNPFVGVTLITRTETSPRAETMHIAEINLNAPGIGVKLTSPGGTLETVRQT TLDYLNQEHAQLAINGEFFLPFPSSDFNSMLIGLAASNGNVYSSFEAPVQSYAIVTDAPALNIDQSNHASIVHDNTSFVD GKHVLENVTLWNTIAGSAQIITNGVASIPTYLDATHPNGLLTPGGPASYSNSNSWYNLINARTVIGLSQDNQTLFLFTVD NAGGSRGMTLPEVANLLIGDYSIYNALNLDGGGSTSMAMQDPVTGMGRFINVSSDNPSGRAEGSNLAIFAIDAPEPAGML VGGFVVIMVLRRKVESRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35988; Mature: 35857
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCTSRSLLGLTILTVCCGRPEPLHGSQIVTNPFVGVTLITRTETSPRAETMHIAEINLN CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEEEEEC APGIGVKLTSPGGTLETVRQTTLDYLNQEHAQLAINGEFFLPFPSSDFNSMLIGLAASNG CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCEEEEEEEECCC NVYSSFEAPVQSYAIVTDAPALNIDQSNHASIVHDNTSFVDGKHVLENVTLWNTIAGSAQ CEEEEECCCHHHEEEEECCCEECCCCCCCCEEEECCCCEECCHHHHHCEEEEEECCCCCE IITNGVASIPTYLDATHPNGLLTPGGPASYSNSNSWYNLINARTVIGLSQDNQTLFLFTV EECCCHHHCCCEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEE DNAGGSRGMTLPEVANLLIGDYSIYNALNLDGGGSTSMAMQDPVTGMGRFINVSSDNPSG ECCCCCCCCCHHHHHHHHHCCCHHEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCC RAEGSNLAIFAIDAPEPAGMLVGGFVVIMVLRRKVESRAR CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TCTSRSLLGLTILTVCCGRPEPLHGSQIVTNPFVGVTLITRTETSPRAETMHIAEINLN CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEEEEEC APGIGVKLTSPGGTLETVRQTTLDYLNQEHAQLAINGEFFLPFPSSDFNSMLIGLAASNG CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCEEEEEEEECCC NVYSSFEAPVQSYAIVTDAPALNIDQSNHASIVHDNTSFVDGKHVLENVTLWNTIAGSAQ CEEEEECCCHHHEEEEECCCEECCCCCCCCEEEECCCCEECCHHHHHCEEEEEECCCCCE IITNGVASIPTYLDATHPNGLLTPGGPASYSNSNSWYNLINARTVIGLSQDNQTLFLFTV EECCCHHHCCCEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEE DNAGGSRGMTLPEVANLLIGDYSIYNALNLDGGGSTSMAMQDPVTGMGRFINVSSDNPSG ECCCCCCCCCHHHHHHHHHCCCHHEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCC RAEGSNLAIFAIDAPEPAGMLVGGFVVIMVLRRKVESRAR CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA