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The map label for this gene is ytcJ [H]

Identifier: 116625152

GI number: 116625152

Start: 7624939

End: 7626228

Strand: Reverse

Name: ytcJ [H]

Synonym: Acid_6092

Alternate gene names: 116625152

Gene position: 7626228-7624939 (Counterclockwise)

Preceding gene: 116625153

Following gene: 116625151

Centisome position: 76.53

GC content: 61.94

Gene sequence:

>1290_bases
ATGCGTTTCCCGACAAGACACGATCTGGATGTCACGCCTGACCATCCCGTGGCTTTCGACGGCAGCTACGTCTGGGGCGC
CAACTCGCTCGCACTGAAAATCAGCGGCATTACCCATGACACTCCTAACCCTCCCGGCGGCGAGATCGTGAAGGGTCCGG
ACGGCGAACCGAACGGCATCCTGCGCAACGCATCGCAACTGCTCAAGGGTGTTGCGCGCTCGGAGACATTCAGCGCTGAA
GACAAGGTGCCCGCGCTCGCCAAGATGCTCCAGCTTTACGCCGCGGCTGGACTCACGGCGGTGGGCGACCGAGCGGTAAC
ACCCGCGGGGGTCGCCGTGTACGAGAAACTGAAGTCGCGGCAGCAACTCCCAGTCCGCGTGATTCTGACATGGCGCATCA
ACGCCGCGCGCTCCGTGGAGCAGGTGGTCTCCGAAATCCAGGCTTCGTCGTGGACCAACCAGGGTGACGACTGGCTGCGC
TTCGGCACATTCAAGGTCACGCTGGATGGCGGGCAGAGTGTCGGCACCGCCTACCAGCGCATGTCCTACGGAGCATTTGG
CCGCCAGTTTTACGGGCAGACCGATCCCGACTCGCGCGGTACGCTGTTCATCGATTCCGAAAAGCTCTATCGCATCATGC
GTGCCGCCCGCAACAGGGCCTGGCAACTCACGGCGCACGTACAGGGTGGAGGCGCCGTCGATACCCTGCTCGATGTCTTC
CAGCGGCTGGACCGCGAGAAGCCCATCGCACCCTCGCGATCACACGTCATGCACGGCAGCCTCATGAGCGAGGACGCGTT
GAATCGGATGCAGCGCATGGGCGTAATCGTCGACGTACAGCCCGGGTGGCTTTACTTCGATGTGCCGGCGCTCAAGTGGG
TATTCGGCTTGGAGAACATGCGGTACTTCTTCCCGCTGCGCAGCCATATCGATCGCGGCATCATCGCCGCCGGCGGCAGC
GACCACATGATCGGTCATGACAAGAATGAGGCCGTCAACCCCTTCAACCCGTTCTTCAACATGTGGGCGTCGATCACACG
CCGCACCCGCGAAGGCGAGGTAATCTACGCACAGGAAAAGATCACGCGTCAGGAAGCTCTCAAAATGTGGACCATCTGGG
CGGCGTATCTTCAATTTGGAGAGAAGACTCGCGGCTCCCTCGAAGCCGGCAAGTTCGCCGATCTGGTGGTCATCGACCGC
GACTTTTTAGGTTGCGCGGAGGACGACATCCGCCGCATCGAACCCCTCGCGACCATTGTCAACGGGCGAGTGGTGTGGGG
CCGGCTGTGA

Upstream 100 bases:

>100_bases
CATCGCCGCGATTCAGGACTATATCCGCACTGCGGCGCGCTCACGGGCCAAAGGCGCCTGGATCGTCGTGCCTCGAACCC
TGCCTCCGCGGCTTTAAGAG

Downstream 100 bases:

>100_bases
TTACGCGGCGCCGGATCCTTGGGTCTGCCTGCGCCCTTGCCGTGGGCGCTCTGCGCGCGCAACCGCCTGCCGGCGGCATC
CGCTATCGCGAGTATGCGCG

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRFPTRHDLDVTPDHPVAFDGSYVWGANSLALKISGITHDTPNPPGGEIVKGPDGEPNGILRNASQLLKGVARSETFSAE
DKVPALAKMLQLYAAAGLTAVGDRAVTPAGVAVYEKLKSRQQLPVRVILTWRINAARSVEQVVSEIQASSWTNQGDDWLR
FGTFKVTLDGGQSVGTAYQRMSYGAFGRQFYGQTDPDSRGTLFIDSEKLYRIMRAARNRAWQLTAHVQGGGAVDTLLDVF
QRLDREKPIAPSRSHVMHGSLMSEDALNRMQRMGVIVDVQPGWLYFDVPALKWVFGLENMRYFFPLRSHIDRGIIAAGGS
DHMIGHDKNEAVNPFNPFFNMWASITRRTREGEVIYAQEKITRQEALKMWTIWAAYLQFGEKTRGSLEAGKFADLVVIDR
DFLGCAEDDIRRIEPLATIVNGRVVWGRL

Sequences:

>Translated_429_residues
MRFPTRHDLDVTPDHPVAFDGSYVWGANSLALKISGITHDTPNPPGGEIVKGPDGEPNGILRNASQLLKGVARSETFSAE
DKVPALAKMLQLYAAAGLTAVGDRAVTPAGVAVYEKLKSRQQLPVRVILTWRINAARSVEQVVSEIQASSWTNQGDDWLR
FGTFKVTLDGGQSVGTAYQRMSYGAFGRQFYGQTDPDSRGTLFIDSEKLYRIMRAARNRAWQLTAHVQGGGAVDTLLDVF
QRLDREKPIAPSRSHVMHGSLMSEDALNRMQRMGVIVDVQPGWLYFDVPALKWVFGLENMRYFFPLRSHIDRGIIAAGGS
DHMIGHDKNEAVNPFNPFFNMWASITRRTREGEVIYAQEKITRQEALKMWTIWAAYLQFGEKTRGSLEAGKFADLVVIDR
DFLGCAEDDIRRIEPLATIVNGRVVWGRL
>Mature_429_residues
MRFPTRHDLDVTPDHPVAFDGSYVWGANSLALKISGITHDTPNPPGGEIVKGPDGEPNGILRNASQLLKGVARSETFSAE
DKVPALAKMLQLYAAAGLTAVGDRAVTPAGVAVYEKLKSRQQLPVRVILTWRINAARSVEQVVSEIQASSWTNQGDDWLR
FGTFKVTLDGGQSVGTAYQRMSYGAFGRQFYGQTDPDSRGTLFIDSEKLYRIMRAARNRAWQLTAHVQGGGAVDTLLDVF
QRLDREKPIAPSRSHVMHGSLMSEDALNRMQRMGVIVDVQPGWLYFDVPALKWVFGLENMRYFFPLRSHIDRGIIAAGGS
DHMIGHDKNEAVNPFNPFFNMWASITRRTREGEVIYAQEKITRQEALKMWTIWAAYLQFGEKTRGSLEAGKFADLVVIDR
DFLGCAEDDIRRIEPLATIVNGRVVWGRL

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 47883; Mature: 47883

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPTRHDLDVTPDHPVAFDGSYVWGANSLALKISGITHDTPNPPGGEIVKGPDGEPNGI
CCCCCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCHH
LRNASQLLKGVARSETFSAEDKVPALAKMLQLYAAAGLTAVGDRAVTPAGVAVYEKLKSR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHH
QQLPVRVILTWRINAARSVEQVVSEIQASSWTNQGDDWLRFGTFKVTLDGGQSVGTAYQR
CCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHH
MSYGAFGRQFYGQTDPDSRGTLFIDSEKLYRIMRAARNRAWQLTAHVQGGGAVDTLLDVF
HHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH
QRLDREKPIAPSRSHVMHGSLMSEDALNRMQRMGVIVDVQPGWLYFDVPALKWVFGLENM
HHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCEEEEEHHHHHHHHHHCCC
RYFFPLRSHIDRGIIAAGGSDHMIGHDKNEAVNPFNPFFNMWASITRRTREGEVIYAQEK
CEEEEHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHH
ITRQEALKMWTIWAAYLQFGEKTRGSLEAGKFADLVVIDRDFLGCAEDDIRRIEPLATIV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
NGRVVWGRL
CCEEEEECC
>Mature Secondary Structure
MRFPTRHDLDVTPDHPVAFDGSYVWGANSLALKISGITHDTPNPPGGEIVKGPDGEPNGI
CCCCCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCHH
LRNASQLLKGVARSETFSAEDKVPALAKMLQLYAAAGLTAVGDRAVTPAGVAVYEKLKSR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHH
QQLPVRVILTWRINAARSVEQVVSEIQASSWTNQGDDWLRFGTFKVTLDGGQSVGTAYQR
CCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHH
MSYGAFGRQFYGQTDPDSRGTLFIDSEKLYRIMRAARNRAWQLTAHVQGGGAVDTLLDVF
HHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH
QRLDREKPIAPSRSHVMHGSLMSEDALNRMQRMGVIVDVQPGWLYFDVPALKWVFGLENM
HHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCEEEEEHHHHHHHHHHCCC
RYFFPLRSHIDRGIIAAGGSDHMIGHDKNEAVNPFNPFFNMWASITRRTREGEVIYAQEK
CEEEEHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHH
ITRQEALKMWTIWAAYLQFGEKTRGSLEAGKFADLVVIDRDFLGCAEDDIRRIEPLATIV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
NGRVVWGRL
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]