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The map label for this gene is yhjL [C]

Identifier: 116625149

GI number: 116625149

Start: 7619462

End: 7620496

Strand: Reverse

Name: yhjL [C]

Synonym: Acid_6087

Alternate gene names: 116625149

Gene position: 7620496-7619462 (Counterclockwise)

Preceding gene: 116625150

Following gene: 116625148

Centisome position: 76.47

GC content: 60.48

Gene sequence:

>1035_bases
ATGAAGCCTCTTCTGATCCTATTCGCTGCTGCCGCTTTCACCTGGGCGACGGCTGATGTCGGAGCTCTTGCGGAAGCCAA
CATTGGCCTCGGGTTGGCGCGCGAGGGCAAGTACGAACTGGCGATCCAGCACTACCGCGCAGCCGCCGTCTTGGATCCTC
ACCTGCAGGGCCTGTATCTGAACCTCGGTCTGGCCTACGTTAAGCTGAATAAGTTTCCCGATGCTGTGCCTGCCCTGGAA
CAGGCAGCGCAAGCCGACCCATCCAGCTTCCAGGTCCGCGTATTACTCGGAATGAGTTACTATGGGTGCCGTCGATTCGA
TGCTGCCGCGGCCCAACTGAAGCGCGCGGCCCAGCAACAGCCCGACAACGTGGAATTACGGTACAAGCTGGCCCAAAGTT
ACCTCTGGTCGGGGCAATACCAGGAGGCGATTGGAGAATTCCGTTTTCTGCTCACCAAGGACCCGGATTCCGCACCTGTT
CACATGCTTCTGGGCGACGTGCTCGATGCAGCCAACCAAACCGAGCCAGCCACTGCGGAGTTTGAGGCGGCGGTGAAAGC
ATCGCCGGCGGAGCCCGAAGCGCACTTCAGCCTCGGGTACCTCTATTGGAAGCAGAAGCGCTTTGCGGAAGCGTGCCGCG
AGTTCCAGGCGGAACTGGCGCAGCACCCGAAGCATGTACAGGCCATGACCTATTTGGGTGACGCCGAAATGCATGCGGGA
GACGAGAAGGCGGCCGAGGAGCATTTGCGGCGCGCGCTCAGTTTGGATTCGAATACCCGGCTGGCGCATTTGGATCTTGG
CATCCTCCTCGCCGGCAAAGACGATTCAGCCGCAGCCGCCCGTTTCTTGAGCGAGGCGATTCGGATCGATCCATCGAAAC
CGGATGCCCACTACCGTCTGGGCAGGCTGTTGCGTTCTCAGGGCCGGGAATCGGAAGCCGAGAAAGAGTTCGCTAAGGTG
AAAGAGCTGTCACGGGAAGAGCCGCAGACGCCGCTCATCAAGCTGCCGGGTCAGGGCAGCAAGCAGGTTCCGTGA

Upstream 100 bases:

>100_bases
CTCTCACTTCCTTTGTTTGCACCCGGGTTCCGGGAACAGGCTGGTCTGAGCCGCCACATCGGGGTAGTATGGAGGTAGAA
GCGGGTCCGAGATCGACTCC

Downstream 100 bases:

>100_bases
GGGGCGCACGCCCGGCTGCGGCCGTTGCCGTATTGCTTGCCGCCTGGGCCATATCTTCCGGTCAGAATGCCCGTCCGCCG
ATTCACTTCCATTACAGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Peptidase; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Glycosyl Transferase Family Protein; O-GlcNAc Transferase; Methyltransferase Type; Tetratricopeptide Repeat-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; SEC-C Motif Domain Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Flp Pilus Assembly Protein TadD; TPR Repeat-Containing Serine/Threonine Protein Kinase; Protein With TPR Motifs; TPR Repeats Containing Protein; SPY Protein; TPR-Domain Containing Protein; Protein Kinase; Social Gliding Motility Protein Tgl; O-Linked N-Acetylglucosamine Transferase

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKPLLILFAAAAFTWATADVGALAEANIGLGLAREGKYELAIQHYRAAAVLDPHLQGLYLNLGLAYVKLNKFPDAVPALE
QAAQADPSSFQVRVLLGMSYYGCRRFDAAAAQLKRAAQQQPDNVELRYKLAQSYLWSGQYQEAIGEFRFLLTKDPDSAPV
HMLLGDVLDAANQTEPATAEFEAAVKASPAEPEAHFSLGYLYWKQKRFAEACREFQAELAQHPKHVQAMTYLGDAEMHAG
DEKAAEEHLRRALSLDSNTRLAHLDLGILLAGKDDSAAAARFLSEAIRIDPSKPDAHYRLGRLLRSQGRESEAEKEFAKV
KELSREEPQTPLIKLPGQGSKQVP

Sequences:

>Translated_344_residues
MKPLLILFAAAAFTWATADVGALAEANIGLGLAREGKYELAIQHYRAAAVLDPHLQGLYLNLGLAYVKLNKFPDAVPALE
QAAQADPSSFQVRVLLGMSYYGCRRFDAAAAQLKRAAQQQPDNVELRYKLAQSYLWSGQYQEAIGEFRFLLTKDPDSAPV
HMLLGDVLDAANQTEPATAEFEAAVKASPAEPEAHFSLGYLYWKQKRFAEACREFQAELAQHPKHVQAMTYLGDAEMHAG
DEKAAEEHLRRALSLDSNTRLAHLDLGILLAGKDDSAAAARFLSEAIRIDPSKPDAHYRLGRLLRSQGRESEAEKEFAKV
KELSREEPQTPLIKLPGQGSKQVP
>Mature_344_residues
MKPLLILFAAAAFTWATADVGALAEANIGLGLAREGKYELAIQHYRAAAVLDPHLQGLYLNLGLAYVKLNKFPDAVPALE
QAAQADPSSFQVRVLLGMSYYGCRRFDAAAAQLKRAAQQQPDNVELRYKLAQSYLWSGQYQEAIGEFRFLLTKDPDSAPV
HMLLGDVLDAANQTEPATAEFEAAVKASPAEPEAHFSLGYLYWKQKRFAEACREFQAELAQHPKHVQAMTYLGDAEMHAG
DEKAAEEHLRRALSLDSNTRLAHLDLGILLAGKDDSAAAARFLSEAIRIDPSKPDAHYRLGRLLRSQGRESEAEKEFAKV
KELSREEPQTPLIKLPGQGSKQVP

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=304, Percent_Identity=27.3026315789474, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI32307148, Length=304, Percent_Identity=27.3026315789474, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI25952122, Length=307, Percent_Identity=23.1270358306189, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=306, Percent_Identity=24.1830065359477, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI115532690, Length=306, Percent_Identity=24.1830065359477, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17647755, Length=317, Percent_Identity=27.7602523659306, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24585827, Length=317, Percent_Identity=27.7602523659306, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24585829, Length=317, Percent_Identity=27.7602523659306, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37924; Mature: 37924

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLILFAAAAFTWATADVGALAEANIGLGLAREGKYELAIQHYRAAAVLDPHLQGLYL
CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCEEEE
NLGLAYVKLNKFPDAVPALEQAAQADPSSFQVRVLLGMSYYGCRRFDAAAAQLKRAAQQQ
ECCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDNVELRYKLAQSYLWSGQYQEAIGEFRFLLTKDPDSAPVHMLLGDVLDAANQTEPATAE
CCCHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHH
FEAAVKASPAEPEAHFSLGYLYWKQKRFAEACREFQAELAQHPKHVQAMTYLGDAEMHAG
HHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCC
DEKAAEEHLRRALSLDSNTRLAHLDLGILLAGKDDSAAAARFLSEAIRIDPSKPDAHYRL
CHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHH
GRLLRSQGRESEAEKEFAKVKELSREEPQTPLIKLPGQGSKQVP
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKPLLILFAAAAFTWATADVGALAEANIGLGLAREGKYELAIQHYRAAAVLDPHLQGLYL
CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCEEEE
NLGLAYVKLNKFPDAVPALEQAAQADPSSFQVRVLLGMSYYGCRRFDAAAAQLKRAAQQQ
ECCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDNVELRYKLAQSYLWSGQYQEAIGEFRFLLTKDPDSAPVHMLLGDVLDAANQTEPATAE
CCCHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHH
FEAAVKASPAEPEAHFSLGYLYWKQKRFAEACREFQAELAQHPKHVQAMTYLGDAEMHAG
HHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCC
DEKAAEEHLRRALSLDSNTRLAHLDLGILLAGKDDSAAAARFLSEAIRIDPSKPDAHYRL
CHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHH
GRLLRSQGRESEAEKEFAKVKELSREEPQTPLIKLPGQGSKQVP
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA