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The map label for this gene is resD [H]

Identifier: 116625105

GI number: 116625105

Start: 7564195

End: 7564569

Strand: Reverse

Name: resD [H]

Synonym: Acid_6041

Alternate gene names: 116625105

Gene position: 7564569-7564195 (Counterclockwise)

Preceding gene: 116625106

Following gene: 116625102

Centisome position: 75.91

GC content: 58.67

Gene sequence:

>375_bases
ATGACAGCGAATTCCAGCATCCTGATCGTGGACGACGAACCGCAAATCAGGAACCTCCTCTCCTTCACTCTTGAAAACGC
CGGTTACGCGGTGACGACGGCGGCTAACGGGCGCGATGCAATCGCCGTTCTCGCGGAGGAGTCTTTCGACCTTTTGCTCT
CCGATGTCATGATGCCGGAGATGAACGGCCACCAGCTGGCGCAATGGGTGGCGTCTCATCATCCAGAAACGCGGACGGCC
TTGATGTCCGGGTACGATCCAGGTTGCAGAAATTGCGCCTACTCGCCACGGTGCCATCTAATCGCGAAACCGTTTCAGCC
TCGTCAGGTGCTGGCCTTTGTCGAGGAGGTTCTGACGGCCCCGATGCCGTCCTGA

Upstream 100 bases:

>100_bases
TGCACCCGGCATACTACAAAGGCGGTTGGCTGCCCGGCGATGAGTTTCCGCTGGCCGCCTACTCCGGCTGCCGAACCGGG
GTCTAGTTTAGGTGGGTAAC

Downstream 100 bases:

>100_bases
ACTACTAGGCGATTTGAGCAACTTCATCGACTACTGCGTAACGCAAGCATTCGAGCCCACCAGAATGCCGTGGGGGGGGC
AACGGTCGAATCGGGTGTTA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTANSSILIVDDEPQIRNLLSFTLENAGYAVTTAANGRDAIAVLAEESFDLLLSDVMMPEMNGHQLAQWVASHHPETRTA
LMSGYDPGCRNCAYSPRCHLIAKPFQPRQVLAFVEEVLTAPMPS

Sequences:

>Translated_124_residues
MTANSSILIVDDEPQIRNLLSFTLENAGYAVTTAANGRDAIAVLAEESFDLLLSDVMMPEMNGHQLAQWVASHHPETRTA
LMSGYDPGCRNCAYSPRCHLIAKPFQPRQVLAFVEEVLTAPMPS
>Mature_123_residues
TANSSILIVDDEPQIRNLLSFTLENAGYAVTTAANGRDAIAVLAEESFDLLLSDVMMPEMNGHQLAQWVASHHPETRTAL
MSGYDPGCRNCAYSPRCHLIAKPFQPRQVLAFVEEVLTAPMPS

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=121, Percent_Identity=33.8842975206612, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=64, Percent_Identity=46.875, Blast_Score=61, Evalue=3e-11,
Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=32.1739130434783, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13589; Mature: 13457

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANSSILIVDDEPQIRNLLSFTLENAGYAVTTAANGRDAIAVLAEESFDLLLSDVMMPE
CCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHCCC
MNGHQLAQWVASHHPETRTALMSGYDPGCRNCAYSPRCHLIAKPFQPRQVLAFVEEVLTA
CCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
PMPS
CCCC
>Mature Secondary Structure 
TANSSILIVDDEPQIRNLLSFTLENAGYAVTTAANGRDAIAVLAEESFDLLLSDVMMPE
CCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHCCC
MNGHQLAQWVASHHPETRTALMSGYDPGCRNCAYSPRCHLIAKPFQPRQVLAFVEEVLTA
CCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
PMPS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]