| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625100
Identifier: 116625100
GI number: 116625100
Start: 7560890
End: 7561579
Strand: Direct
Name: 116625100
Synonym: Acid_6036
Alternate gene names: NA
Gene position: 7560890-7561579 (Clockwise)
Preceding gene: 116625099
Following gene: 116625101
Centisome position: 75.87
GC content: 52.03
Gene sequence:
>690_bases GTGCCGACCAACCCATTCGATTTGCAAAATTTCCATGTCGCCGTATGGTACGAGGACTTGGCAGAACTTCACAACCGAGA CTTCATTTCTGGCATAACGTGTGTCACTGAGCGCGAGTGGCAGATACGAAAGTGGGAGCACCTTCGATCTCTTGCGCCAG CCGGGTCCGAGTTCGGTTACGAAGATCCTAATGGGAGATTCGTGCCCCTCGACGAGCCCTCGTTTCAAGAGTTCGACGAC GACGCCAATTGGCGCTCTTTCGTTGTTTCAGATGAAGGCCGAATCAGCGTAACCGACAAAGGCTGCCGATTCATGCTGAA CGAACTTCAGGCCGAGAACGTGGATTTTTCGACCACCATTTCTCCGAAGGTGGCGCGTCTCTTCGGCCTGGGTTTCTTCG ATACGTGCATCCGTGAGGCCTGCGTACAACTGGAGCACGAAATTAAGGTGCGCATTGGTTCGGCAGACTATGGGGAAAAG TTAACCCAGTCTTTCATAAGCACGTTGAGGGCAAAGAGCGGGCTCTTGGAAAGCTATGTGCGGACATTTCGCCAGGAACT GAGAACCGTGTTCAAATTCATTCGAAACGACTATATGCACAATCTCCTGGAAGCCGATGAAGTGACTGCATACTCAATCC TGTTTCGAATTGGCCGAATACGCTCGGTGCTCGCGACAGAACACGACTAG
Upstream 100 bases:
>100_bases CCCCCTACTCCAGTTGACGGCTTTTCCACTGCGTACCGAATTCATTGTTGTTGGCGACATCGACCAATCGTTGTTGTTGA TTGCCGATGTTCGGGGCAGT
Downstream 100 bases:
>100_bases AGGTATCCCGTTTTTCCGTGGAGCGAATATGACCAGAGCAACGGGTCCACGTTGATGAGACCGACCGCAGCCTGTACGCC CGGGCTCTGAACAGCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPTNPFDLQNFHVAVWYEDLAELHNRDFISGITCVTEREWQIRKWEHLRSLAPAGSEFGYEDPNGRFVPLDEPSFQEFDD DANWRSFVVSDEGRISVTDKGCRFMLNELQAENVDFSTTISPKVARLFGLGFFDTCIREACVQLEHEIKVRIGSADYGEK LTQSFISTLRAKSGLLESYVRTFRQELRTVFKFIRNDYMHNLLEADEVTAYSILFRIGRIRSVLATEHD
Sequences:
>Translated_229_residues MPTNPFDLQNFHVAVWYEDLAELHNRDFISGITCVTEREWQIRKWEHLRSLAPAGSEFGYEDPNGRFVPLDEPSFQEFDD DANWRSFVVSDEGRISVTDKGCRFMLNELQAENVDFSTTISPKVARLFGLGFFDTCIREACVQLEHEIKVRIGSADYGEK LTQSFISTLRAKSGLLESYVRTFRQELRTVFKFIRNDYMHNLLEADEVTAYSILFRIGRIRSVLATEHD >Mature_228_residues PTNPFDLQNFHVAVWYEDLAELHNRDFISGITCVTEREWQIRKWEHLRSLAPAGSEFGYEDPNGRFVPLDEPSFQEFDDD ANWRSFVVSDEGRISVTDKGCRFMLNELQAENVDFSTTISPKVARLFGLGFFDTCIREACVQLEHEIKVRIGSADYGEKL TQSFISTLRAKSGLLESYVRTFRQELRTVFKFIRNDYMHNLLEADEVTAYSILFRIGRIRSVLATEHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26579; Mature: 26448
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNPFDLQNFHVAVWYEDLAELHNRDFISGITCVTEREWQIRKWEHLRSLAPAGSEFGY CCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC EDPNGRFVPLDEPSFQEFDDDANWRSFVVSDEGRISVTDKGCRFMLNELQAENVDFSTTI CCCCCCEEECCCCCHHHCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCCC SPKVARLFGLGFFDTCIREACVQLEHEIKVRIGSADYGEKLTQSFISTLRAKSGLLESYV CHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RTFRQELRTVFKFIRNDYMHNLLEADEVTAYSILFRIGRIRSVLATEHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTNPFDLQNFHVAVWYEDLAELHNRDFISGITCVTEREWQIRKWEHLRSLAPAGSEFGY CCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC EDPNGRFVPLDEPSFQEFDDDANWRSFVVSDEGRISVTDKGCRFMLNELQAENVDFSTTI CCCCCCEEECCCCCHHHCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCCC SPKVARLFGLGFFDTCIREACVQLEHEIKVRIGSADYGEKLTQSFISTLRAKSGLLESYV CHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RTFRQELRTVFKFIRNDYMHNLLEADEVTAYSILFRIGRIRSVLATEHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA