| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625088
Identifier: 116625088
GI number: 116625088
Start: 7548244
End: 7548768
Strand: Reverse
Name: 116625088
Synonym: Acid_6022
Alternate gene names: NA
Gene position: 7548768-7548244 (Counterclockwise)
Preceding gene: 116625089
Following gene: 116625087
Centisome position: 75.75
GC content: 56.0
Gene sequence:
>525_bases GTGAGAAGAACGTCTATCATCTGGGCAATAGTAGGGTTGGGGGCGTGCAGCGCTTTGGGTGCGGCGACCTCTGATGAGCC ACCACCACCGTCACGAGCTGAGATCAACGAGCTGCTGGATAAGGCAGAGCAAAAGGTTTCAGCCTACGAGGAAGCGGTGA AACTGGCCAAGCCCAAGCTCGACATGGGAAACGAAAAGCTGTTCGACCGGGACGCGGACGCTAGTTCCGGTGCCCACCAA GTCATCGCAGCGGTACGCAAAAAGGGTCCCAGCGCTTACGGTCTGATGCTGCTGATCTCGATCCTGGATGACTTGAGTCT GGCTGCGGCTACGGATGGAATGGTGATCTCCCAGGTATCGCTGGCCGCATGTCGGGCAGGAATACGGGACGACAGCGATG TCACCGCGCTAATCAATGCGGGAACCTCATTGCACGATATTTCCGAGCTGATTCTTCACGCCTCGTTACGGTTCATATTC GTAGAAGAACGGCTGATGATCAACAAGCAGCTGCTCCACCAATGA
Upstream 100 bases:
>100_bases CTGTACGGCCAACAGGACGGGGTCGAGATCGCGCGCAAGCCGGTCTCTAGCGGGCGCGCGGGCGGATCGAGCTCGAACGC AGCGTGGAGGAGCATAGCAA
Downstream 100 bases:
>100_bases AGACCGGCAGCACAGAACGGAGGAGATTCGGCATGAAGAAAGACGATCCGAGCGAGTCCCGCCGTGCCGCAGGGGAGGCG CGCTGGGCTGGGGTCAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRRTSIIWAIVGLGACSALGAATSDEPPPPSRAEINELLDKAEQKVSAYEEAVKLAKPKLDMGNEKLFDRDADASSGAHQ VIAAVRKKGPSAYGLMLLISILDDLSLAAATDGMVISQVSLAACRAGIRDDSDVTALINAGTSLHDISELILHASLRFIF VEERLMINKQLLHQ
Sequences:
>Translated_174_residues MRRTSIIWAIVGLGACSALGAATSDEPPPPSRAEINELLDKAEQKVSAYEEAVKLAKPKLDMGNEKLFDRDADASSGAHQ VIAAVRKKGPSAYGLMLLISILDDLSLAAATDGMVISQVSLAACRAGIRDDSDVTALINAGTSLHDISELILHASLRFIF VEERLMINKQLLHQ >Mature_174_residues MRRTSIIWAIVGLGACSALGAATSDEPPPPSRAEINELLDKAEQKVSAYEEAVKLAKPKLDMGNEKLFDRDADASSGAHQ VIAAVRKKGPSAYGLMLLISILDDLSLAAATDGMVISQVSLAACRAGIRDDSDVTALINAGTSLHDISELILHASLRFIF VEERLMINKQLLHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18622; Mature: 18622
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTSIIWAIVGLGACSALGAATSDEPPPPSRAEINELLDKAEQKVSAYEEAVKLAKPKL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DMGNEKLFDRDADASSGAHQVIAAVRKKGPSAYGLMLLISILDDLSLAAATDGMVISQVS CCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAACRAGIRDDSDVTALINAGTSLHDISELILHASLRFIFVEERLMINKQLLHQ HHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRTSIIWAIVGLGACSALGAATSDEPPPPSRAEINELLDKAEQKVSAYEEAVKLAKPKL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DMGNEKLFDRDADASSGAHQVIAAVRKKGPSAYGLMLLISILDDLSLAAATDGMVISQVS CCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAACRAGIRDDSDVTALINAGTSLHDISELILHASLRFIFVEERLMINKQLLHQ HHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA