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The map label for this gene is 116625084

Identifier: 116625084

GI number: 116625084

Start: 7545680

End: 7546282

Strand: Reverse

Name: 116625084

Synonym: Acid_6018

Alternate gene names: NA

Gene position: 7546282-7545680 (Counterclockwise)

Preceding gene: 116625085

Following gene: 116625082

Centisome position: 75.72

GC content: 58.54

Gene sequence:

>603_bases
ATGAAAGTGTACATGAAACCAGTCTTCCTTTTTCTCATCATTTTGACGGGCGCGCTATCTGCACAGACTGCGCCCGTCGA
ACCAATTCCGCCGCCAACGCCTGCTCAGCCACCCGTGGTGTTTAGGGTCGGTGGGGCGGTAGCGCCCCCCGCAGTGTTGT
CTAAGGTCGAGCCGACCTACACACCCGAAGCCAAGGCGAAGAACATCCAAGGAGCAGTACTCCTTTACGCTGTAGTGAAT
ACCGAAGGCCAAGCGCAGAACATTCGCGTGCTGAAGCCGCTGGACCCAGGTCTAGACACAGCCGCGATTGCCGCCGTGAA
GCAATGGAAGTTTAAGCCCGGAACCAAAGATGGAGATCCGGTGAACGTCGAGGCCCAGATCGAGGTTCACTTTCAGCTCT
TCACTCAGCCCGTCAAGCCGGGAGAGGTGGACGCACACGCGGTTCCCGATAAGCCGACGAAGCCGACGAAGCGAGGGAAG
ACATCAGGCGAAGCCTCAGCCGAAGTAGACGTGGAGCGCGAAGCCTGCGCCAGGATCGCCGAATTGATGGGTGCGCCCGA
GATCGCTGCAGCAATCCGGTATCGCGCCAAGAATCATCAGTAG

Upstream 100 bases:

>100_bases
GTTTGTCCACCCCGGTGTTTGGGCCAGTCTTGAAGGTCGCGTTGTACAACGGGAGCACCGTCCCGCTGACGGTCAAGCAG
GTCTCGATTTACGCAACGAA

Downstream 100 bases:

>100_bases
TATTTCGTCGCGGGCCGGGGCTGCCACTCGTCGTCCTCGCTGTCGCTGCCCAGGTGGATCAGGTTGCCCCTGGCGCAGGC
GCAGGAGGCCACAGACGGCG

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKVYMKPVFLFLIILTGALSAQTAPVEPIPPPTPAQPPVVFRVGGAVAPPAVLSKVEPTYTPEAKAKNIQGAVLLYAVVN
TEGQAQNIRVLKPLDPGLDTAAIAAVKQWKFKPGTKDGDPVNVEAQIEVHFQLFTQPVKPGEVDAHAVPDKPTKPTKRGK
TSGEASAEVDVEREACARIAELMGAPEIAAAIRYRAKNHQ

Sequences:

>Translated_200_residues
MKVYMKPVFLFLIILTGALSAQTAPVEPIPPPTPAQPPVVFRVGGAVAPPAVLSKVEPTYTPEAKAKNIQGAVLLYAVVN
TEGQAQNIRVLKPLDPGLDTAAIAAVKQWKFKPGTKDGDPVNVEAQIEVHFQLFTQPVKPGEVDAHAVPDKPTKPTKRGK
TSGEASAEVDVEREACARIAELMGAPEIAAAIRYRAKNHQ
>Mature_200_residues
MKVYMKPVFLFLIILTGALSAQTAPVEPIPPPTPAQPPVVFRVGGAVAPPAVLSKVEPTYTPEAKAKNIQGAVLLYAVVN
TEGQAQNIRVLKPLDPGLDTAAIAAVKQWKFKPGTKDGDPVNVEAQIEVHFQLFTQPVKPGEVDAHAVPDKPTKPTKRGK
TSGEASAEVDVEREACARIAELMGAPEIAAAIRYRAKNHQ

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21340; Mature: 21340

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYMKPVFLFLIILTGALSAQTAPVEPIPPPTPAQPPVVFRVGGAVAPPAVLSKVEPTY
CEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCC
TPEAKAKNIQGAVLLYAVVNTEGQAQNIRVLKPLDPGLDTAAIAAVKQWKFKPGTKDGDP
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC
VNVEAQIEVHFQLFTQPVKPGEVDAHAVPDKPTKPTKRGKTSGEASAEVDVEREACARIA
EEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHH
ELMGAPEIAAAIRYRAKNHQ
HHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVYMKPVFLFLIILTGALSAQTAPVEPIPPPTPAQPPVVFRVGGAVAPPAVLSKVEPTY
CEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCC
TPEAKAKNIQGAVLLYAVVNTEGQAQNIRVLKPLDPGLDTAAIAAVKQWKFKPGTKDGDP
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC
VNVEAQIEVHFQLFTQPVKPGEVDAHAVPDKPTKPTKRGKTSGEASAEVDVEREACARIA
EEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHH
ELMGAPEIAAAIRYRAKNHQ
HHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA