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The map label for this gene is pinR [C]

Identifier: 116625070

GI number: 116625070

Start: 7525996

End: 7526658

Strand: Direct

Name: pinR [C]

Synonym: Acid_6000

Alternate gene names: 116625070

Gene position: 7525996-7526658 (Clockwise)

Preceding gene: 116625068

Following gene: 116625071

Centisome position: 75.52

GC content: 61.99

Gene sequence:

>663_bases
ATGGCCACGACGAAAAAGGCGTTCGCATACCTGCGGGTCAGCGGACGCGGTCAGGTTGACGGCGACGGCTTCCCGCGCCA
ACTGGCCGCGGTGAAAGCCTACGCCGCCAGCCACGGCATCCGAATCGTACAGGTCTTCGAGGAGAAGGGCGTCTCGGGCA
CGAATGAGCTTGCAGACCGCCCTGCATTCATGGAGATGATGACGGCGCTGCACGCTAATGGTGTGAGGCTGGTGCTCTGC
GAAGGCCTGCACCGCCTGGCGCGTGACCTAATGGTCCAGGAGTCGATTCTCCACGACCTGAAGCGCCACGGGTTCGAACT
GATCAGCGTGCAGGAACCAGACCTGTGTAGCGACGATCCAAGCCGTAAGCTAATGCGCCAGATCATGGGTGCCTTCGCCG
AGTACGAGAAGACGATGATCGTGGTCAAGCTGGCTGGCGCTCGCCAACGGATGAAGAAGAAGACTGGCGCCTGCGAAGGT
AGGAAGCCCTATGGCTACTTCGAAGGGGAGCAGGTGGTCCTTGACCGCCTGAAGTCAATGCGGGCCAGTGGCGCGACATA
CGAAGCGATTGCGGCCACGCTTAACAGCGAAGGGATTGAGCCGCGCAGGGCGGGGTCGAAGTGGCACGCTGGGTACGTCC
ACCGGTTGTTGACGCGGGGGTAG

Upstream 100 bases:

>100_bases
GTATTTCCACTTCATGCTAAGGCACGTGATTCTATGCTACTTCTCTCTTTCTGAAGAAAGAGAGTTGACAATGTGAACCT
GTTAGATCAATGATGGGTGC

Downstream 100 bases:

>100_bases
CAAGCGATTCCGCTGCACCAGGTGGTATTGATCTGAATGCTGCGGTTTGTCCAACCGAAGAGTTTGAATCAACCGGCGAC
ATTCACCCGCCATTGCTGCA

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: Resolvase Domain Protein; Integrase; Resolvase; Recombinase; Resolvase Domain Containing Protein; Site-Specific DNA Recombinase; Resolvase Domain; Site-Specific Recombinase For Integration And Excision; Site-Specific Recombinase DNA Invertase Pin-Related; Resolvase Family Site-Specific Recombinase; Resolvase-Like Protein; Site-Specific Recombinase Resolvase Family; Site-Specific Recombinase; Serine Recombinase; Resolvase/Recombinase Domain Protein; DNA Recombinase

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MATTKKAFAYLRVSGRGQVDGDGFPRQLAAVKAYAASHGIRIVQVFEEKGVSGTNELADRPAFMEMMTALHANGVRLVLC
EGLHRLARDLMVQESILHDLKRHGFELISVQEPDLCSDDPSRKLMRQIMGAFAEYEKTMIVVKLAGARQRMKKKTGACEG
RKPYGYFEGEQVVLDRLKSMRASGATYEAIAATLNSEGIEPRRAGSKWHAGYVHRLLTRG

Sequences:

>Translated_220_residues
MATTKKAFAYLRVSGRGQVDGDGFPRQLAAVKAYAASHGIRIVQVFEEKGVSGTNELADRPAFMEMMTALHANGVRLVLC
EGLHRLARDLMVQESILHDLKRHGFELISVQEPDLCSDDPSRKLMRQIMGAFAEYEKTMIVVKLAGARQRMKKKTGACEG
RKPYGYFEGEQVVLDRLKSMRASGATYEAIAATLNSEGIEPRRAGSKWHAGYVHRLLTRG
>Mature_219_residues
ATTKKAFAYLRVSGRGQVDGDGFPRQLAAVKAYAASHGIRIVQVFEEKGVSGTNELADRPAFMEMMTALHANGVRLVLCE
GLHRLARDLMVQESILHDLKRHGFELISVQEPDLCSDDPSRKLMRQIMGAFAEYEKTMIVVKLAGARQRMKKKTGACEGR
KPYGYFEGEQVVLDRLKSMRASGATYEAIAATLNSEGIEPRRAGSKWHAGYVHRLLTRG

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24427; Mature: 24295

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTKKAFAYLRVSGRGQVDGDGFPRQLAAVKAYAASHGIRIVQVFEEKGVSGTNELADR
CCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCHHHHCC
PAFMEMMTALHANGVRLVLCEGLHRLARDLMVQESILHDLKRHGFELISVQEPDLCSDDP
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCH
SRKLMRQIMGAFAEYEKTMIVVKLAGARQRMKKKTGACEGRKPYGYFEGEQVVLDRLKSM
HHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RASGATYEAIAATLNSEGIEPRRAGSKWHAGYVHRLLTRG
HCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ATTKKAFAYLRVSGRGQVDGDGFPRQLAAVKAYAASHGIRIVQVFEEKGVSGTNELADR
CCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCHHHHCC
PAFMEMMTALHANGVRLVLCEGLHRLARDLMVQESILHDLKRHGFELISVQEPDLCSDDP
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCH
SRKLMRQIMGAFAEYEKTMIVVKLAGARQRMKKKTGACEGRKPYGYFEGEQVVLDRLKSM
HHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RASGATYEAIAATLNSEGIEPRRAGSKWHAGYVHRLLTRG
HCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA