| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625055
Identifier: 116625055
GI number: 116625055
Start: 7508850
End: 7510112
Strand: Reverse
Name: 116625055
Synonym: Acid_5985
Alternate gene names: NA
Gene position: 7510112-7508850 (Counterclockwise)
Preceding gene: 116625063
Following gene: 116625054
Centisome position: 75.36
GC content: 63.74
Gene sequence:
>1263_bases GTGGCTTCCGGCCGGCCGCTATACGGCACCCGGCCGGAGCGACTCGCCACCAATTATCCGCCACTTTCATTCCACCTCGA AGCCGCCCTCGGCCGGGTGACCGGCGATTTCAACCTCGCCGGCCGCCTCATCTCGATCGCCGCTTTCCTTTGGGTCGCCA TCTGCTGCGGGCTCGCCGTTCGCATCGCCACCGGTGATTCGACTGCGGCGATCTTCGCCGTGTTGTTCTGCATCGCCTGG TTCACGCCTTTCGCGCCCTACAACGTGGGTGTCAACGATCCGCAAATGCTCGGCCACGCTCTCATGCTGACCGGTGTCGT CCTGTATCTCGCTGCCGGACGCTCCGCTCGCCTGCTTGCCGTCTCCTGCGTTTTCTTCTGTCTTGGCGGATTTACCAAGC ACAGCCTCCTCGCCTTTCCACTCGCGGTCACGTTCGATATCCTGCTGCGATCCCGCCGCCGCTTCGTCCTCTGGGCCGCG ACCGCCGCAGTCACTTGCGCTCTGCTCACCGCTCTTACCCTGTGGGTCGATGGCCCCTACGTGTTGCAGCACCTGCTTAG CCCCCGCCGTTATCTTTTGTCTCGCGCCACCTTCATCTCCGCGACCTTCCTCCGCATCTATACGCCCGGTCTGCTGGTGG GCGCCACCTGGTGTTTTACCGCCGCGCGGCGCTCCAAGGCGCGCTTCCTCGCCTTCGCTCTTCCGCTCTCTCTGATCACC GGCGCGATCTTCGCCGGAGGCGCCGGCGTCGCCGTCAACATCTTCTATGACGCCTGGATTGTGAGCGCCATCATCGCCGC CCTGGTGCTCTCCGGCGCCGCCGCCGGTGCCGCTCCCGGATCCTTCCGCTGGTTTGCCGCAATGCTCTTGATCCCGCTGC TCTTTTCGGCACTTCCGATTGCCGCCGGACTATACACCTCGATCCCGCCTTCCGATGTCCTGGCCCGCGAAGACCGCGTT TTCGCCGAAGATATCGCCTTCCTGAAGAGCCGCCCCGGCCCCGCCATCTGCTTCGATCTTCTGCTCTGCCACCAGGCAGG CAAGACCCTCTCTTACGAGCCTTTCGTTACCGGCGAATTGATCGCCACCGGACACCTCGACCCCGCTGTGGTGGCCGCCG AGCTGGCCAGCCGGAAATACGCGGTCATCCAGTCGGATCAGGGGATTACGTACTTTTCCCCTACCATCCTCGATGCCCTC AACTCGCACTACCGCATCGACCGCCAAAGTTCCCGCTCGGTGTTCTATGTGCCTGTCGAATGA
Upstream 100 bases:
>100_bases TCCGACTGCCATTCGCATATCCAGCATCATCGTTCGCGCCACTTCGTACCACCACACGATCTCGTATAACGAGGGCTGGA ACTCATACTATTCTCACGAT
Downstream 100 bases:
>100_bases CGCCTCTGTTAGCATGAAGGCTTGCGCCTCGGCATCCACACTTTCACGTCCGGATCGCTCGAAACCGCGGCGCTCACTGC CGGCGATTTGGGGGCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MASGRPLYGTRPERLATNYPPLSFHLEAALGRVTGDFNLAGRLISIAAFLWVAICCGLAVRIATGDSTAAIFAVLFCIAW FTPFAPYNVGVNDPQMLGHALMLTGVVLYLAAGRSARLLAVSCVFFCLGGFTKHSLLAFPLAVTFDILLRSRRRFVLWAA TAAVTCALLTALTLWVDGPYVLQHLLSPRRYLLSRATFISATFLRIYTPGLLVGATWCFTAARRSKARFLAFALPLSLIT GAIFAGGAGVAVNIFYDAWIVSAIIAALVLSGAAAGAAPGSFRWFAAMLLIPLLFSALPIAAGLYTSIPPSDVLAREDRV FAEDIAFLKSRPGPAICFDLLLCHQAGKTLSYEPFVTGELIATGHLDPAVVAAELASRKYAVIQSDQGITYFSPTILDAL NSHYRIDRQSSRSVFYVPVE
Sequences:
>Translated_420_residues MASGRPLYGTRPERLATNYPPLSFHLEAALGRVTGDFNLAGRLISIAAFLWVAICCGLAVRIATGDSTAAIFAVLFCIAW FTPFAPYNVGVNDPQMLGHALMLTGVVLYLAAGRSARLLAVSCVFFCLGGFTKHSLLAFPLAVTFDILLRSRRRFVLWAA TAAVTCALLTALTLWVDGPYVLQHLLSPRRYLLSRATFISATFLRIYTPGLLVGATWCFTAARRSKARFLAFALPLSLIT GAIFAGGAGVAVNIFYDAWIVSAIIAALVLSGAAAGAAPGSFRWFAAMLLIPLLFSALPIAAGLYTSIPPSDVLAREDRV FAEDIAFLKSRPGPAICFDLLLCHQAGKTLSYEPFVTGELIATGHLDPAVVAAELASRKYAVIQSDQGITYFSPTILDAL NSHYRIDRQSSRSVFYVPVE >Mature_419_residues ASGRPLYGTRPERLATNYPPLSFHLEAALGRVTGDFNLAGRLISIAAFLWVAICCGLAVRIATGDSTAAIFAVLFCIAWF TPFAPYNVGVNDPQMLGHALMLTGVVLYLAAGRSARLLAVSCVFFCLGGFTKHSLLAFPLAVTFDILLRSRRRFVLWAAT AAVTCALLTALTLWVDGPYVLQHLLSPRRYLLSRATFISATFLRIYTPGLLVGATWCFTAARRSKARFLAFALPLSLITG AIFAGGAGVAVNIFYDAWIVSAIIAALVLSGAAAGAAPGSFRWFAAMLLIPLLFSALPIAAGLYTSIPPSDVLAREDRVF AEDIAFLKSRPGPAICFDLLLCHQAGKTLSYEPFVTGELIATGHLDPAVVAAELASRKYAVIQSDQGITYFSPTILDALN SHYRIDRQSSRSVFYVPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45168; Mature: 45037
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGRPLYGTRPERLATNYPPLSFHLEAALGRVTGDFNLAGRLISIAAFLWVAICCGLAV CCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEE RIATGDSTAAIFAVLFCIAWFTPFAPYNVGVNDPQMLGHALMLTGVVLYLAAGRSARLLA EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH VSCVFFCLGGFTKHSLLAFPLAVTFDILLRSRRRFVLWAATAAVTCALLTALTLWVDGPY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHH VLQHLLSPRRYLLSRATFISATFLRIYTPGLLVGATWCFTAARRSKARFLAFALPLSLIT HHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIFAGGAGVAVNIFYDAWIVSAIIAALVLSGAAAGAAPGSFRWFAAMLLIPLLFSALPI HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGLYTSIPPSDVLAREDRVFAEDIAFLKSRPGPAICFDLLLCHQAGKTLSYEPFVTGEL HHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCE IATGHLDPAVVAAELASRKYAVIQSDQGITYFSPTILDALNSHYRIDRQSSRSVFYVPVE EEECCCCHHHHHHHHHCCCEEEEECCCCCEEECHHHHHHHHHHEEECCCCCCCEEEEECC >Mature Secondary Structure ASGRPLYGTRPERLATNYPPLSFHLEAALGRVTGDFNLAGRLISIAAFLWVAICCGLAV CCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEE RIATGDSTAAIFAVLFCIAWFTPFAPYNVGVNDPQMLGHALMLTGVVLYLAAGRSARLLA EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH VSCVFFCLGGFTKHSLLAFPLAVTFDILLRSRRRFVLWAATAAVTCALLTALTLWVDGPY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHH VLQHLLSPRRYLLSRATFISATFLRIYTPGLLVGATWCFTAARRSKARFLAFALPLSLIT HHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIFAGGAGVAVNIFYDAWIVSAIIAALVLSGAAAGAAPGSFRWFAAMLLIPLLFSALPI HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGLYTSIPPSDVLAREDRVFAEDIAFLKSRPGPAICFDLLLCHQAGKTLSYEPFVTGEL HHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCE IATGHLDPAVVAAELASRKYAVIQSDQGITYFSPTILDALNSHYRIDRQSSRSVFYVPVE EEECCCCHHHHHHHHHCCCEEEEECCCCCEEECHHHHHHHHHHEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA