Click here to switch to the map view.

The map label for this gene is yneP [H]

Identifier: 116624982

GI number: 116624982

Start: 7410126

End: 7410605

Strand: Direct

Name: yneP [H]

Synonym: Acid_5912

Alternate gene names: 116624982

Gene position: 7410126-7410605 (Clockwise)

Preceding gene: 116624977

Following gene: 116624985

Centisome position: 74.36

GC content: 61.04

Gene sequence:

>480_bases
ATGGGCAGAACGATAACTCTCAGTCTAACAGACGGTTCCAGACGGCCTCCGGGTTGCGCTGAGTTACAATCAATCTTCCC
GATGACACCTGTGAACGAGACCCGCCTGCGCGTCCGGTACGCGGAAACCGATCAGATGGGCGTGGTCTACTACGCGAATT
ATTTGGTGTGGATGGAGGTAGGCCGGGTGGAGCTGTGCAAGGCCTGCGGGTTCAATTATCGTGAGATGGAGGCTGAGGAC
GGGATTTTCCTGGCGGTGGCCGAATCGCACTGCCGGTACCGGTCGCCGGCGCGGTTCGACGACGAAGTGACGGTACGGAC
GTGGATCGAGACGGCAAATACGCGGATGGTGACGTTCGCCTACGAGATGCGGGTGGCGGACCGGCGGGTGGCTACCGGGA
CGACACGCCATGTGTTTGTGTCGCGCGCCATGCGGCCGACGCATTTGCCCGAGAAATACCACGCGCTGTTCGGGGTGTAG

Upstream 100 bases:

>100_bases
GAAAACCGACTGCAGGTCGGTTCCCGGCGGAAACTCGGCATCCTCCGCCGATTTTCCTACGATATCTCTCAACATCCCGA
AAAAAAGAACTCGCGCGCGC

Downstream 100 bases:

>100_bases
CAAGCCGCGACCTATTGGGCAAGGGAGGCTCGGCGCTCAATTAACCGTGGCGTTTTGGGTGGTGCTCCATGCGGACGCCG
AAGGGCTCGGGGAGGCCGAG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGRTITLSLTDGSRRPPGCAELQSIFPMTPVNETRLRVRYAETDQMGVVYYANYLVWMEVGRVELCKACGFNYREMEAED
GIFLAVAESHCRYRSPARFDDEVTVRTWIETANTRMVTFAYEMRVADRRVATGTTRHVFVSRAMRPTHLPEKYHALFGV

Sequences:

>Translated_159_residues
MGRTITLSLTDGSRRPPGCAELQSIFPMTPVNETRLRVRYAETDQMGVVYYANYLVWMEVGRVELCKACGFNYREMEAED
GIFLAVAESHCRYRSPARFDDEVTVRTWIETANTRMVTFAYEMRVADRRVATGTTRHVFVSRAMRPTHLPEKYHALFGV
>Mature_158_residues
GRTITLSLTDGSRRPPGCAELQSIFPMTPVNETRLRVRYAETDQMGVVYYANYLVWMEVGRVELCKACGFNYREMEAEDG
IFLAVAESHCRYRSPARFDDEVTVRTWIETANTRMVTFAYEMRVADRRVATGTTRHVFVSRAMRPTHLPEKYHALFGV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18327; Mature: 18196

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTITLSLTDGSRRPPGCAELQSIFPMTPVNETRLRVRYAETDQMGVVYYANYLVWMEV
CCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEC
GRVELCKACGFNYREMEAEDGIFLAVAESHCRYRSPARFDDEVTVRTWIETANTRMVTFA
CHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEE
YEMRVADRRVATGTTRHVFVSRAMRPTHLPEKYHALFGV
EEEECCCCEECCCCHHHEEEECCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
GRTITLSLTDGSRRPPGCAELQSIFPMTPVNETRLRVRYAETDQMGVVYYANYLVWMEV
CCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEC
GRVELCKACGFNYREMEAEDGIFLAVAESHCRYRSPARFDDEVTVRTWIETANTRMVTFA
CHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEE
YEMRVADRRVATGTTRHVFVSRAMRPTHLPEKYHALFGV
EEEECCCCEECCCCHHHEEEECCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]