| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624957
Identifier: 116624957
GI number: 116624957
Start: 7378923
End: 7380287
Strand: Direct
Name: 116624957
Synonym: Acid_5886
Alternate gene names: NA
Gene position: 7378923-7380287 (Clockwise)
Preceding gene: 116624956
Following gene: 116624959
Centisome position: 74.04
GC content: 69.08
Gene sequence:
>1365_bases ATGAAACTTGCGCTCCGATTTGCCCTCATCGTCATTCCCCTTGCCTCTGCTTCCTCCCAGATGACGCTCGATCAGGTCGT ACAGGACGCTTCCACCAAATACCCCAACGTCCGCGTCTCTCTCGAGCAGGTCTCCGCCGCCGCTGCTGCCGTGAACCTGG CGCGCACTGCCTTTCTCCCCCGCGTCGATGCCGCCGCGCAGCTCAATCGCGCCACCCACAACAACATCTTCGGCCTCATG CTCCCGCAGTCAGGACTCTTCCCCTCCATCAGCGGCCCAGTGCTCCGCACCAATTCGATGGAGAGCGTGTGGGGCACTGC GGTAGGCGTGCTGGTGCAGTGGGAACCCTTCGACTTCGGACTCCGCAAGGCCAATGTGGAGGTCGCCCAAGCCTCGCGCA GCCGCGCCCAGGCACAGGTCGCCGTCACCCGCCTCGAGGCCGTGGCCGCCGCCGCCGATTCCTACCTCACCATCGTGGCC GCGCAGCAGACCGTCACCGCCGCCACGGCTGCGGTGGAACGCGCGCGCGTGCTGGACCAAATCGTCGGCGTCCTGGTCCG TAACGAACTGCGCCCCGGTGCCGAGGCCTCGCGCGCACGCGCCGAGTTCGCCGTCGCCGAGACCCAGCTGATCCAATCCG AAGAGGCCGTCGAAATCGCGCGCGCCGCTCTCGCTCAGGTCCTCGGAGTGCCTCCCGCGACCATCCAGGTCGCGCCCGGC CGCCTGCTCGACCTGCCCCCGGAATCCGCCGGGATGCCCGAAACTCCTCCCGCCGCTCACCCCGTGATCGCCGCCCAAAC CACCGCCGTCGCCGAAGTGCAAGCCCGCGAAAAAGCCCTCGACCGCGCCTGGTATCCGCGCTTCAACCTCGAAGCCTCGG AATACGCGCGCGGCACCGGCGTCCAGCCTGACGGCTCTACCGGCGGCTTCGCCAGCGGACTCGGACCCAACATCCAGAAT TGGGCCGTCGGCATGACCGTGACCTTTCCGCTCGCCGAGCTCCCCAGCCTGCACGCGCGCCAGCAGATCGAGCGCGCCCG CGAACGCGCCGAGCGCGCACGCTACGACCAGTTGGTCCAGAACTTCAACGGGGAAATCGCGCGAGCCCGCGCCGTCCTCA GCGGTGCCCGGCGCGTAGCCGCCAACGTGCCGGTGCAACTGGAAGCTGCCCGTGAGGCCGAGCAGCAGGCCACCGCCCGC TACCGCGCCGGCCTCGGCACCCTGGTCGAAGTGGCCGAAGCGCAGCGTCTCCACACCCAGGCCGAAATCGATTCCTCGCT AGCCCGCCTCAACGTCTGGCGCGCCCTCCTCGCGCTCGCCATCGCCCAGGGCGACGTCGCCCCTTTCGTAACGCAGGCCA GGTAG
Upstream 100 bases:
>100_bases CCGAATAGATTCGACCTCGTCCGCCGTTTCGCCGTCATGCGAACCGCGACCGTCAGAGAGCGATCTCCAACGCCCCTGAG CTACGATACTTGCAGTACCC
Downstream 100 bases:
>100_bases GATAGGCAGCCTGTCCCACTAATCTAATCGTCCACCGGCTTCTTCACCGTGATCGTATAACTCTGCACGAAGTTATGCCC CTGCCCCGCGTCCGACGTCA
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Protein-Like Protein
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKLALRFALIVIPLASASSQMTLDQVVQDASTKYPNVRVSLEQVSAAAAAVNLARTAFLPRVDAAAQLNRATHNNIFGLM LPQSGLFPSISGPVLRTNSMESVWGTAVGVLVQWEPFDFGLRKANVEVAQASRSRAQAQVAVTRLEAVAAAADSYLTIVA AQQTVTAATAAVERARVLDQIVGVLVRNELRPGAEASRARAEFAVAETQLIQSEEAVEIARAALAQVLGVPPATIQVAPG RLLDLPPESAGMPETPPAAHPVIAAQTTAVAEVQAREKALDRAWYPRFNLEASEYARGTGVQPDGSTGGFASGLGPNIQN WAVGMTVTFPLAELPSLHARQQIERARERAERARYDQLVQNFNGEIARARAVLSGARRVAANVPVQLEAAREAEQQATAR YRAGLGTLVEVAEAQRLHTQAEIDSSLARLNVWRALLALAIAQGDVAPFVTQAR
Sequences:
>Translated_454_residues MKLALRFALIVIPLASASSQMTLDQVVQDASTKYPNVRVSLEQVSAAAAAVNLARTAFLPRVDAAAQLNRATHNNIFGLM LPQSGLFPSISGPVLRTNSMESVWGTAVGVLVQWEPFDFGLRKANVEVAQASRSRAQAQVAVTRLEAVAAAADSYLTIVA AQQTVTAATAAVERARVLDQIVGVLVRNELRPGAEASRARAEFAVAETQLIQSEEAVEIARAALAQVLGVPPATIQVAPG RLLDLPPESAGMPETPPAAHPVIAAQTTAVAEVQAREKALDRAWYPRFNLEASEYARGTGVQPDGSTGGFASGLGPNIQN WAVGMTVTFPLAELPSLHARQQIERARERAERARYDQLVQNFNGEIARARAVLSGARRVAANVPVQLEAAREAEQQATAR YRAGLGTLVEVAEAQRLHTQAEIDSSLARLNVWRALLALAIAQGDVAPFVTQAR >Mature_454_residues MKLALRFALIVIPLASASSQMTLDQVVQDASTKYPNVRVSLEQVSAAAAAVNLARTAFLPRVDAAAQLNRATHNNIFGLM LPQSGLFPSISGPVLRTNSMESVWGTAVGVLVQWEPFDFGLRKANVEVAQASRSRAQAQVAVTRLEAVAAAADSYLTIVA AQQTVTAATAAVERARVLDQIVGVLVRNELRPGAEASRARAEFAVAETQLIQSEEAVEIARAALAQVLGVPPATIQVAPG RLLDLPPESAGMPETPPAAHPVIAAQTTAVAEVQAREKALDRAWYPRFNLEASEYARGTGVQPDGSTGGFASGLGPNIQN WAVGMTVTFPLAELPSLHARQQIERARERAERARYDQLVQNFNGEIARARAVLSGARRVAANVPVQLEAAREAEQQATAR YRAGLGTLVEVAEAQRLHTQAEIDSSLARLNVWRALLALAIAQGDVAPFVTQAR
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48367; Mature: 48367
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLALRFALIVIPLASASSQMTLDQVVQDASTKYPNVRVSLEQVSAAAAAVNLARTAFLP CCHHHEEHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCC RVDAAAQLNRATHNNIFGLMLPQSGLFPSISGPVLRTNSMESVWGTAVGVLVQWEPFDFG CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHEEEEEEECCCCCC LRKANVEVAQASRSRAQAQVAVTRLEAVAAAADSYLTIVAAQQTVTAATAAVERARVLDQ CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHH IVGVLVRNELRPGAEASRARAEFAVAETQLIQSEEAVEIARAALAQVLGVPPATIQVAPG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RLLDLPPESAGMPETPPAAHPVIAAQTTAVAEVQAREKALDRAWYPRFNLEASEYARGTG CEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC VQPDGSTGGFASGLGPNIQNWAVGMTVTFPLAELPSLHARQQIERARERAERARYDQLVQ CCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH NFNGEIARARAVLSGARRVAANVPVQLEAAREAEQQATARYRAGLGTLVEVAEAQRLHTQ HCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AEIDSSLARLNVWRALLALAIAQGDVAPFVTQAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MKLALRFALIVIPLASASSQMTLDQVVQDASTKYPNVRVSLEQVSAAAAAVNLARTAFLP CCHHHEEHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCC RVDAAAQLNRATHNNIFGLMLPQSGLFPSISGPVLRTNSMESVWGTAVGVLVQWEPFDFG CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHEEEEEEECCCCCC LRKANVEVAQASRSRAQAQVAVTRLEAVAAAADSYLTIVAAQQTVTAATAAVERARVLDQ CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHH IVGVLVRNELRPGAEASRARAEFAVAETQLIQSEEAVEIARAALAQVLGVPPATIQVAPG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RLLDLPPESAGMPETPPAAHPVIAAQTTAVAEVQAREKALDRAWYPRFNLEASEYARGTG CEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC VQPDGSTGGFASGLGPNIQNWAVGMTVTFPLAELPSLHARQQIERARERAERARYDQLVQ CCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH NFNGEIARARAVLSGARRVAANVPVQLEAAREAEQQATARYRAGLGTLVEVAEAQRLHTQ HCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AEIDSSLARLNVWRALLALAIAQGDVAPFVTQAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA