| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624950
Identifier: 116624950
GI number: 116624950
Start: 7369396
End: 7370118
Strand: Direct
Name: 116624950
Synonym: Acid_5879
Alternate gene names: NA
Gene position: 7369396-7370118 (Clockwise)
Preceding gene: 116624949
Following gene: 116624953
Centisome position: 73.95
GC content: 60.17
Gene sequence:
>723_bases GTGATTTCCAGAGTCCCCGTTGCGACCCTGCTGGCGCTTTGCACAATATCTGTGTGCCTGGCTCAGCCGCCCGTCCCCCA ACCGGTAGATTCCGACGAAGCTTCACCGGTAATCCCCGTCTCTCCGCTCAATGAGAACCGTATCTTTGGTGTCATTCCCG ACTACCAGACCGTCACTGACACCGGCAGCGGCGTGAAGCCTCTCACGCCCGGGCAGAAGTGGTCCTTAGCTCTCAAAGAG ACCGTCGATCCCTTCAATGTGATCAATGCCGCCATGGGCGCGGCATTTTCACAGCGCGGCAATCAGACCCCGAAATACGG CGAAGGCGGCGATGCCTACGGCCGCCGCTTCGGCGCGGCACTGGCCGATTTTGGAACACAGAATTTCTTCAGCGCGGGCC TTCTGGCCGTGGTCCTCCACCAGGATCCCCGGTATTACCGCAAGGGACCGGGTACCAGCGTTGTGAAGCGGGCGGTCTAT TCCGTGAGCCGTCTCGTCATAGCGCGCCAGGATTCGGGCGCGCAGGCCTTCAACACGTCGGGCATCGGCGGCATGATGAT GGGCATCGCGGCGTCCAACCTTTACTATCCCGCCGCCAGCCGGCGCGGCTCCGTCATGATGTGCCGGATTTCAACCAGCC TCACCGGCGGAATCATGGGCAACCTCATGTCCGAATTCTGGCCGGATATCCAAAAGAAGTTCTTCCATAAACATTCCAAC TGA
Upstream 100 bases:
>100_bases CTTGAGAAGCTGCTGCGCGCCCACATCGTTCGATAGCCCTTTGGAGCCGTATCCTTAATGACAGCGTAACCACTTCACGA CACACTGCGCCTTCTGACCA
Downstream 100 bases:
>100_bases GCCTGTTAGCAACCGCTCCCTGACGGTCACGGCTCCGTTCCGAGCCGCGCGCGTCAGCAAGCGGTTGGTCATTCGAATTG AATCTCGCGGTTACTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MISRVPVATLLALCTISVCLAQPPVPQPVDSDEASPVIPVSPLNENRIFGVIPDYQTVTDTGSGVKPLTPGQKWSLALKE TVDPFNVINAAMGAAFSQRGNQTPKYGEGGDAYGRRFGAALADFGTQNFFSAGLLAVVLHQDPRYYRKGPGTSVVKRAVY SVSRLVIARQDSGAQAFNTSGIGGMMMGIAASNLYYPAASRRGSVMMCRISTSLTGGIMGNLMSEFWPDIQKKFFHKHSN
Sequences:
>Translated_240_residues MISRVPVATLLALCTISVCLAQPPVPQPVDSDEASPVIPVSPLNENRIFGVIPDYQTVTDTGSGVKPLTPGQKWSLALKE TVDPFNVINAAMGAAFSQRGNQTPKYGEGGDAYGRRFGAALADFGTQNFFSAGLLAVVLHQDPRYYRKGPGTSVVKRAVY SVSRLVIARQDSGAQAFNTSGIGGMMMGIAASNLYYPAASRRGSVMMCRISTSLTGGIMGNLMSEFWPDIQKKFFHKHSN >Mature_240_residues MISRVPVATLLALCTISVCLAQPPVPQPVDSDEASPVIPVSPLNENRIFGVIPDYQTVTDTGSGVKPLTPGQKWSLALKE TVDPFNVINAAMGAAFSQRGNQTPKYGEGGDAYGRRFGAALADFGTQNFFSAGLLAVVLHQDPRYYRKGPGTSVVKRAVY SVSRLVIARQDSGAQAFNTSGIGGMMMGIAASNLYYPAASRRGSVMMCRISTSLTGGIMGNLMSEFWPDIQKKFFHKHSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25697; Mature: 25697
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRVPVATLLALCTISVCLAQPPVPQPVDSDEASPVIPVSPLNENRIFGVIPDYQTVTD CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCEECC TGSGVKPLTPGQKWSLALKETVDPFNVINAAMGAAFSQRGNQTPKYGEGGDAYGRRFGAA CCCCCCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LADFGTQNFFSAGLLAVVLHQDPRYYRKGPGTSVVKRAVYSVSRLVIARQDSGAQAFNTS HHHHCCHHHHHHHHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCC GIGGMMMGIAASNLYYPAASRRGSVMMCRISTSLTGGIMGNLMSEFWPDIQKKFFHKHSN CCCHHHHHHHHCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MISRVPVATLLALCTISVCLAQPPVPQPVDSDEASPVIPVSPLNENRIFGVIPDYQTVTD CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCEECC TGSGVKPLTPGQKWSLALKETVDPFNVINAAMGAAFSQRGNQTPKYGEGGDAYGRRFGAA CCCCCCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LADFGTQNFFSAGLLAVVLHQDPRYYRKGPGTSVVKRAVYSVSRLVIARQDSGAQAFNTS HHHHCCHHHHHHHHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCC GIGGMMMGIAASNLYYPAASRRGSVMMCRISTSLTGGIMGNLMSEFWPDIQKKFFHKHSN CCCHHHHHHHHCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA