| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB1 [H]
Identifier: 116624921
GI number: 116624921
Start: 7323240
End: 7325810
Strand: Direct
Name: macB1 [H]
Synonym: Acid_5847
Alternate gene names: 116624921
Gene position: 7323240-7325810 (Clockwise)
Preceding gene: 116624920
Following gene: 116624928
Centisome position: 73.48
GC content: 63.83
Gene sequence:
>2571_bases ATGAAGCTCTGGAAGAAGATCCGGCAGTGGCGGCGCCGCGCGGAATTTGAGGCCGGCCTGGAAGAGGAGATGCGATTCCA TCGCGAGATGGCAGGCGGCGCGGCATTCGGGAGCATGGCGCTCGCGCTGGAGGATAGCCGCGCGGTGTGGAGTTTCGGCT GGCTGGAATCGGTGATTCAAGACGTGCGGTACGCGCTGCGCGGATTTCGCAAATCGCCGGGTTTCGCGCTCGCGGTGGTC GGCACGATCGGCGCGGCCCTGGGTCTGAACACCACGATGTTCACGGTATTTAACGCCTACGCGCTGCGCTCGTTCTCGGT CAACGACCCGTGGGCGCTTTACACCTTCACCTGGTATGGCAAGGATGCGCAAGGGCACCGCTTCACCTGGGCGCAGTACC AGAATATTGCGGCGCGCAAGACGCCGTTTTCCGACGTGATCGCTACAGAGAGTTTCGTGGCGGACGTAGAGGGCCGCTCT CTTTTCGGAGAGTTGGTCTCGGGAAATTACTTCACGATGCTGGGGGTCGGGGTAGCGGACGGGCGCCCGCTGCTCCCCCC AGACGCGGGAGCGCCGGGGAGCGGCGCCGTAATGGTGATCAGTTACGACGCGTGGAAGAACAAATTCGGCGCCGACCCGC ACATGGTCGGAAAAACGCTCCACCTCCGTGGGCATGCTTTCGAAGTGGTTGGGATCGCGAACCCCGCATTCGCGGGCCTG GAGACTTTTCCAGGCGGCTTCTGGATTCCGATCACGATGCACGCGGCAGTGCAGGACGATCGCGATCTACTGGCATCGCC ACAAGCGGAAAAGCTGAAACTGATCGGCCGCTTGCAGGGAGGCATGAAACCCGAGACGGCCAAGGCTGCATTGATGGTCT GGTCGAGCGGTATGTCCGCGAATACAGTTGGCGTGGCGATGCAATCCACGGCGACCACGGTGCCCCTGACGCGCGATGCA ATCGCCACGTTCATTCCGATTTTCGCGGCCTTCGGGCTGGTGCTGCTGATTGCCTGCGCGAACGTGTCGAATATGATGCT GGCACGCGCACTGTCGCGGCAGCGCGAGATCGGCATCCGCGTATCTCTGGGAGCGGGACGGGCGCGGCTGGTGCGCCAGT TATTGACCGAGAGCGTGCTGCTGGCAGGGCCCGCGGCGGCGTTGGGGTTCGCAACCTCGCAGTTCACGATCGAAGCCGCG CGGCGCCTGTTGTTCGCCACGGTGCCGCCGGCTTTCAGCAGCCTGCTCATGATGCCGGCGCTGGCCCCGGACTGGCGCGT CTTCGGCTTCATCCTGCTGGCATCGGCGATCGCAACGCTGATGTTCGGGATGGTGCCGGCGCTGCAAACTACACGCTCGC GCTTGGTGGAAGCGAATCGCGGCGATTTCAGCAGTGACTACCGGCCGGCGCGATTGCGCAGCGCTCTGCTGACTACGCAG GTCGCGGTCTGCTTGCTGCTGCTGATTGTGACCGCGGTAGTGCTCCGCAGCCAGAAGCGGGTGACCGCGCGGACGATCGG GCTGGACCTGACCGGTGTCTGGGATGTAAAGATGCCGGCGAAGTATCAGGCAGCAGCGGCCGAGCGCCTGGCGGCGACGC CCGGTGTGGAAGTTGTTGCAGAGGCCTGGCACGCGCCGCTTTACGGCAGCGAGCGCAGGATCGATCTCTTGCCGTCGGGC GGCGATTCGACGAGAAGACTGGGATACAACCTGGTTTCGGCGGGATATTTTCCGATGTTCCGCATTCCCATTTTGCGCGG ACGCGGCTTCACTGTTGCCGAGGCCGAAGGCGGCGCTCCGGTAGCCGTGGTGAGCGAATCCGCTGCACGGCTGCTCTGGC CGGCCGGCGAGGCCGTCGGACAGACCGTCTCGATTCCGGCGATTGTGCACAAGGACCCTTACTTTGATCGGCGGCCGCAG TTCACGGAGGCGCGCATTGTCGGGGTTGCGCGAGCCGTGTTGAGCGGCTATCTGGCGATGTCCGTGGACCACCAGAGCGC CATGATTTACTTCCCGACCAGTTCACGGGCCGCGGACAATGACTCGATCCTCGTGCGGGTGAGCAGCAGCCGGCGGGATG CGCGCCAGCGCATTGTGACCACGCTCGATGGCATCGCGCCGAGCATCTACGACCTGATCAATCCCATGGAAGACGTCCTG GCAATGCAGATCTATCCTTTCCAGGTGATCTTTTGGGTGGCCGCGTTCCTCGGCGGCCTGGCGCTCGTAATGACTGTGTC GGGAATCTACGGTGTCATGTCGTACCTGGTGAACCAGCGAAAGAAGGAGATTGGCATCCGGGTAGCGCTGGGCGCTGCCG GTGCAGACGTGGTGTGGATGGTGGTCAGGCAATCGGCGCGACAGGCGCTGGTCGGAATTGCGATCGGGGTTGCGCTGGCG CTATCGATCGCACCCGTGTTCGCGCACCAGATCGAGGCGATCCATCCTTACGATTGGATCGCGTATGCAGGCGCGGTAAT GGTAGTGATGTCGGCCGCCGTGGCAGCGACGCTGGCTCCTTCGCGGCAGGCAGTGCGGGTGGACCCGGTGACGGCGCTTA GGTGCGACTAG
Upstream 100 bases:
>100_bases GGTACTACCGGATCACGGCCGCGGGTCGTAAGCAGCTCGAAGCGGAGAAACGAGACTTTGCCTTCCTGCTGGCGGGAATC GCGCGCGTGATGGAGGCCTC
Downstream 100 bases:
>100_bases GTCCATGACAGTGTCTTGTTGCGCTTTTATTTAGCAACCACTCCCTCACGGTCGCGGCAGGGTCTGTGAAAGAATCCCGA TCCGCAGCGAGCTTCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MKLWKKIRQWRRRAEFEAGLEEEMRFHREMAGGAAFGSMALALEDSRAVWSFGWLESVIQDVRYALRGFRKSPGFALAVV GTIGAALGLNTTMFTVFNAYALRSFSVNDPWALYTFTWYGKDAQGHRFTWAQYQNIAARKTPFSDVIATESFVADVEGRS LFGELVSGNYFTMLGVGVADGRPLLPPDAGAPGSGAVMVISYDAWKNKFGADPHMVGKTLHLRGHAFEVVGIANPAFAGL ETFPGGFWIPITMHAAVQDDRDLLASPQAEKLKLIGRLQGGMKPETAKAALMVWSSGMSANTVGVAMQSTATTVPLTRDA IATFIPIFAAFGLVLLIACANVSNMMLARALSRQREIGIRVSLGAGRARLVRQLLTESVLLAGPAAALGFATSQFTIEAA RRLLFATVPPAFSSLLMMPALAPDWRVFGFILLASAIATLMFGMVPALQTTRSRLVEANRGDFSSDYRPARLRSALLTTQ VAVCLLLLIVTAVVLRSQKRVTARTIGLDLTGVWDVKMPAKYQAAAAERLAATPGVEVVAEAWHAPLYGSERRIDLLPSG GDSTRRLGYNLVSAGYFPMFRIPILRGRGFTVAEAEGGAPVAVVSESAARLLWPAGEAVGQTVSIPAIVHKDPYFDRRPQ FTEARIVGVARAVLSGYLAMSVDHQSAMIYFPTSSRAADNDSILVRVSSSRRDARQRIVTTLDGIAPSIYDLINPMEDVL AMQIYPFQVIFWVAAFLGGLALVMTVSGIYGVMSYLVNQRKKEIGIRVALGAAGADVVWMVVRQSARQALVGIAIGVALA LSIAPVFAHQIEAIHPYDWIAYAGAVMVVMSAAVAATLAPSRQAVRVDPVTALRCD
Sequences:
>Translated_856_residues MKLWKKIRQWRRRAEFEAGLEEEMRFHREMAGGAAFGSMALALEDSRAVWSFGWLESVIQDVRYALRGFRKSPGFALAVV GTIGAALGLNTTMFTVFNAYALRSFSVNDPWALYTFTWYGKDAQGHRFTWAQYQNIAARKTPFSDVIATESFVADVEGRS LFGELVSGNYFTMLGVGVADGRPLLPPDAGAPGSGAVMVISYDAWKNKFGADPHMVGKTLHLRGHAFEVVGIANPAFAGL ETFPGGFWIPITMHAAVQDDRDLLASPQAEKLKLIGRLQGGMKPETAKAALMVWSSGMSANTVGVAMQSTATTVPLTRDA IATFIPIFAAFGLVLLIACANVSNMMLARALSRQREIGIRVSLGAGRARLVRQLLTESVLLAGPAAALGFATSQFTIEAA RRLLFATVPPAFSSLLMMPALAPDWRVFGFILLASAIATLMFGMVPALQTTRSRLVEANRGDFSSDYRPARLRSALLTTQ VAVCLLLLIVTAVVLRSQKRVTARTIGLDLTGVWDVKMPAKYQAAAAERLAATPGVEVVAEAWHAPLYGSERRIDLLPSG GDSTRRLGYNLVSAGYFPMFRIPILRGRGFTVAEAEGGAPVAVVSESAARLLWPAGEAVGQTVSIPAIVHKDPYFDRRPQ FTEARIVGVARAVLSGYLAMSVDHQSAMIYFPTSSRAADNDSILVRVSSSRRDARQRIVTTLDGIAPSIYDLINPMEDVL AMQIYPFQVIFWVAAFLGGLALVMTVSGIYGVMSYLVNQRKKEIGIRVALGAAGADVVWMVVRQSARQALVGIAIGVALA LSIAPVFAHQIEAIHPYDWIAYAGAVMVVMSAAVAATLAPSRQAVRVDPVTALRCD >Mature_856_residues MKLWKKIRQWRRRAEFEAGLEEEMRFHREMAGGAAFGSMALALEDSRAVWSFGWLESVIQDVRYALRGFRKSPGFALAVV GTIGAALGLNTTMFTVFNAYALRSFSVNDPWALYTFTWYGKDAQGHRFTWAQYQNIAARKTPFSDVIATESFVADVEGRS LFGELVSGNYFTMLGVGVADGRPLLPPDAGAPGSGAVMVISYDAWKNKFGADPHMVGKTLHLRGHAFEVVGIANPAFAGL ETFPGGFWIPITMHAAVQDDRDLLASPQAEKLKLIGRLQGGMKPETAKAALMVWSSGMSANTVGVAMQSTATTVPLTRDA IATFIPIFAAFGLVLLIACANVSNMMLARALSRQREIGIRVSLGAGRARLVRQLLTESVLLAGPAAALGFATSQFTIEAA RRLLFATVPPAFSSLLMMPALAPDWRVFGFILLASAIATLMFGMVPALQTTRSRLVEANRGDFSSDYRPARLRSALLTTQ VAVCLLLLIVTAVVLRSQKRVTARTIGLDLTGVWDVKMPAKYQAAAAERLAATPGVEVVAEAWHAPLYGSERRIDLLPSG GDSTRRLGYNLVSAGYFPMFRIPILRGRGFTVAEAEGGAPVAVVSESAARLLWPAGEAVGQTVSIPAIVHKDPYFDRRPQ FTEARIVGVARAVLSGYLAMSVDHQSAMIYFPTSSRAADNDSILVRVSSSRRDARQRIVTTLDGIAPSIYDLINPMEDVL AMQIYPFQVIFWVAAFLGGLALVMTVSGIYGVMSYLVNQRKKEIGIRVALGAAGADVVWMVVRQSARQALVGIAIGVALA LSIAPVFAHQIEAIHPYDWIAYAGAVMVVMSAAVAATLAPSRQAVRVDPVTALRCD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=295, Percent_Identity=24.406779661017, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 92387; Mature: 92387
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLWKKIRQWRRRAEFEAGLEEEMRFHREMAGGAAFGSMALALEDSRAVWSFGWLESVIQ CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCEEEEEECCCCHHHHHHHHHHHH DVRYALRGFRKSPGFALAVVGTIGAALGLNTTMFTVFNAYALRSFSVNDPWALYTFTWYG HHHHHHHHCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCEEEEEEEEEC KDAQGHRFTWAQYQNIAARKTPFSDVIATESFVADVEGRSLFGELVSGNYFTMLGVGVAD CCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECC GRPLLPPDAGAPGSGAVMVISYDAWKNKFGADPHMVGKTLHLRGHAFEVVGIANPAFAGL CCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCHHHHCCEEEECCCEEEEEEECCCHHCCH ETFPGGFWIPITMHAAVQDDRDLLASPQAEKLKLIGRLQGGMKPETAKAALMVWSSGMSA HHCCCCEEEEEEEEEHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCC NTVGVAMQSTATTVPLTRDAIATFIPIFAAFGLVLLIACANVSNMMLARALSRQREIGIR CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEE VSLGAGRARLVRQLLTESVLLAGPAAALGFATSQFTIEAARRLLFATVPPAFSSLLMMPA EEECCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHEEECCHHHHHHHHHHC LAPDWRVFGFILLASAIATLMFGMVPALQTTRSRLVEANRGDFSSDYRPARLRSALLTTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH VAVCLLLLIVTAVVLRSQKRVTARTIGLDLTGVWDVKMPAKYQAAAAERLAATPGVEVVA HHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH EAWHAPLYGSERRIDLLPSGGDSTRRLGYNLVSAGYFPMFRIPILRGRGFTVAEAEGGAP HHHCCCCCCCCCEEEEECCCCCCHHHHCCHHHHCCCCCCEEEEEEECCCEEEEECCCCCC VAVVSESAARLLWPAGEAVGQTVSIPAIVHKDPYFDRRPQFTEARIVGVARAVLSGYLAM EEEECCCCHHEECCCCHHHCCEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHE SVDHQSAMIYFPTSSRAADNDSILVRVSSSRRDARQRIVTTLDGIAPSIYDLINPMEDVL EECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHH AMQIYPFQVIFWVAAFLGGLALVMTVSGIYGVMSYLVNQRKKEIGIRVALGAAGADVVWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH VVRQSARQALVGIAIGVALALSIAPVFAHQIEAIHPYDWIAYAGAVMVVMSAAVAATLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SRQAVRVDPVTALRCD CCCEEEECCCEEEECC >Mature Secondary Structure MKLWKKIRQWRRRAEFEAGLEEEMRFHREMAGGAAFGSMALALEDSRAVWSFGWLESVIQ CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCEEEEEECCCCHHHHHHHHHHHH DVRYALRGFRKSPGFALAVVGTIGAALGLNTTMFTVFNAYALRSFSVNDPWALYTFTWYG HHHHHHHHCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCEEEEEEEEEC KDAQGHRFTWAQYQNIAARKTPFSDVIATESFVADVEGRSLFGELVSGNYFTMLGVGVAD CCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECC GRPLLPPDAGAPGSGAVMVISYDAWKNKFGADPHMVGKTLHLRGHAFEVVGIANPAFAGL CCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCHHHHCCEEEECCCEEEEEEECCCHHCCH ETFPGGFWIPITMHAAVQDDRDLLASPQAEKLKLIGRLQGGMKPETAKAALMVWSSGMSA HHCCCCEEEEEEEEEHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCC NTVGVAMQSTATTVPLTRDAIATFIPIFAAFGLVLLIACANVSNMMLARALSRQREIGIR CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEE VSLGAGRARLVRQLLTESVLLAGPAAALGFATSQFTIEAARRLLFATVPPAFSSLLMMPA EEECCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHEEECCHHHHHHHHHHC LAPDWRVFGFILLASAIATLMFGMVPALQTTRSRLVEANRGDFSSDYRPARLRSALLTTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH VAVCLLLLIVTAVVLRSQKRVTARTIGLDLTGVWDVKMPAKYQAAAAERLAATPGVEVVA HHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH EAWHAPLYGSERRIDLLPSGGDSTRRLGYNLVSAGYFPMFRIPILRGRGFTVAEAEGGAP HHHCCCCCCCCCEEEEECCCCCCHHHHCCHHHHCCCCCCEEEEEEECCCEEEEECCCCCC VAVVSESAARLLWPAGEAVGQTVSIPAIVHKDPYFDRRPQFTEARIVGVARAVLSGYLAM EEEECCCCHHEECCCCHHHCCEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHE SVDHQSAMIYFPTSSRAADNDSILVRVSSSRRDARQRIVTTLDGIAPSIYDLINPMEDVL EECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHH AMQIYPFQVIFWVAAFLGGLALVMTVSGIYGVMSYLVNQRKKEIGIRVALGAAGADVVWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH VVRQSARQALVGIAIGVALALSIAPVFAHQIEAIHPYDWIAYAGAVMVVMSAAVAATLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SRQAVRVDPVTALRCD CCCEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA