Click here to switch to the map view.

The map label for this gene is yfiS [H]

Identifier: 116624913

GI number: 116624913

Start: 7315308

End: 7316606

Strand: Reverse

Name: yfiS [H]

Synonym: Acid_5839

Alternate gene names: 116624913

Gene position: 7316606-7315308 (Counterclockwise)

Preceding gene: 116624914

Following gene: 116624912

Centisome position: 73.42

GC content: 63.9

Gene sequence:

>1299_bases
ATGTTCGCGGCCTACTTCACGCTGCTTTGCCGCAATCGCAATTATCGCCTCCTGTGGGTCGCCCAGATTGTCAGTGAACT
GGGAGATTGGTTCTACACCCTCGCCGTCTATCATCTGCTGCTCGAACTCACCGGCAGCAAAGCGCAAGCCGTCGCCTTCG
CCGTGGTGCTCCAGGTGCTCCCCAGCACTCTCGCCGCGCCTACCGCCGGCGTGATCAACGACCGGCTCAGCCGCAAGCGC
ATCATGATCGGCGCAGATGTCGTTCGCTTCTTCATCGTCCTCGGCATGCTGCTGGTGCGCACTCCGTCGATGGTCTGGCT
CGTCTATCCGCTGCTCTTTGTCGAGACCATCGCCGCCGCCTTTTTTGAGCCCGCCCACAGCGCCGTCATCCCCAACATCG
TCCCCGAAGACCAGGTGCTGGCCGCCAACGCCCTCGCCTCCGTCACCTGGAGTTTCTGCCTCGCGGCCGGCGCCGCGCTC
GGCGGATTGCTCGCCGCCTGGCTCGGCCGCGACGCCGTGTTCATTGTCAATGCGTTCTCTTTCCTGGCTTCCGCCTGGCT
CATCCGCCGCATGACATTCAATGAGCCTCACGCCGCCGGACTTCCCCCATTGCGCCCCCGCGAACTCTTCGAATTCACCC
AGGTCCTCGAAGGCTTCCGCTATATCCGCAGCCAACCGCGCCTGTTCGCCACCGTCTTCGTCAAAGGCGGCCTGGGATTG
CTCGGCGCCAACAACGTCCTGTTGCCCATACTCGGTGAGCGCGTCTTTCCCGTGAAACTCGCCGGCCTCGATCACGACCG
CGCCTCGCTGCTCGGCATGAGCATGCTGATGGGCGCGCGCGGCGCCGGTGCCCTCATCGGTCCCCTGGCCAGCGGCCGCT
GGGCCCGCGATCATCATTCGCGCCTGCGCATCGGAATTCTTGCCGGCTTTCTGCTCGCCGCCGCCGGCTACATCGTGCTC
GGAACTTCCACCTCGCTCACGATCGCCATCTGCGCCGTCGTCGCCGCCCATGCTGGAAGTTCCACCAACTGGGTCTTCTC
CAGCACGCTGCTCCAGGTCTACACCGAAGACCGCTTCCGCGGCCGTGTGTTCTCCGCCGATTACGGCCTCTGCATGCTCG
GGATCTCGGCCAGCAGTTACCTCGCCGGCGCCGCCATCGATTTCGGCATTCCACCGCGCAACTTCGCTATCGCCATCGGA
TTGGTGATGTTCGTACCAGCCGCGGCTTGGGCAATAGCCCTGAAACGTACGAGCGAGACACGTACAAGAGATCGCGTCGC
GGACAAATCGGACGTATAA

Upstream 100 bases:

>100_bases
CGATGGCATCCTGCGCGAAGGCGCGGAGCGTGTCGCGCCCATTGCCAACAGCACCGTCCGCACCGTGAAGGAACGCATGG
GCCTCTACACCTAACGCCTC

Downstream 100 bases:

>100_bases
TTCGATCAGCGGAGGTCCCTATGCCGCTTTCTGAGCGACTGCGTAGTTTCCTCGATTCCCGCCACGCGGAGTACACCCTC
ACCAAACATGCAAACGCCTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MFAAYFTLLCRNRNYRLLWVAQIVSELGDWFYTLAVYHLLLELTGSKAQAVAFAVVLQVLPSTLAAPTAGVINDRLSRKR
IMIGADVVRFFIVLGMLLVRTPSMVWLVYPLLFVETIAAAFFEPAHSAVIPNIVPEDQVLAANALASVTWSFCLAAGAAL
GGLLAAWLGRDAVFIVNAFSFLASAWLIRRMTFNEPHAAGLPPLRPRELFEFTQVLEGFRYIRSQPRLFATVFVKGGLGL
LGANNVLLPILGERVFPVKLAGLDHDRASLLGMSMLMGARGAGALIGPLASGRWARDHHSRLRIGILAGFLLAAAGYIVL
GTSTSLTIAICAVVAAHAGSSTNWVFSSTLLQVYTEDRFRGRVFSADYGLCMLGISASSYLAGAAIDFGIPPRNFAIAIG
LVMFVPAAAWAIALKRTSETRTRDRVADKSDV

Sequences:

>Translated_432_residues
MFAAYFTLLCRNRNYRLLWVAQIVSELGDWFYTLAVYHLLLELTGSKAQAVAFAVVLQVLPSTLAAPTAGVINDRLSRKR
IMIGADVVRFFIVLGMLLVRTPSMVWLVYPLLFVETIAAAFFEPAHSAVIPNIVPEDQVLAANALASVTWSFCLAAGAAL
GGLLAAWLGRDAVFIVNAFSFLASAWLIRRMTFNEPHAAGLPPLRPRELFEFTQVLEGFRYIRSQPRLFATVFVKGGLGL
LGANNVLLPILGERVFPVKLAGLDHDRASLLGMSMLMGARGAGALIGPLASGRWARDHHSRLRIGILAGFLLAAAGYIVL
GTSTSLTIAICAVVAAHAGSSTNWVFSSTLLQVYTEDRFRGRVFSADYGLCMLGISASSYLAGAAIDFGIPPRNFAIAIG
LVMFVPAAAWAIALKRTSETRTRDRVADKSDV
>Mature_432_residues
MFAAYFTLLCRNRNYRLLWVAQIVSELGDWFYTLAVYHLLLELTGSKAQAVAFAVVLQVLPSTLAAPTAGVINDRLSRKR
IMIGADVVRFFIVLGMLLVRTPSMVWLVYPLLFVETIAAAFFEPAHSAVIPNIVPEDQVLAANALASVTWSFCLAAGAAL
GGLLAAWLGRDAVFIVNAFSFLASAWLIRRMTFNEPHAAGLPPLRPRELFEFTQVLEGFRYIRSQPRLFATVFVKGGLGL
LGANNVLLPILGERVFPVKLAGLDHDRASLLGMSMLMGARGAGALIGPLASGRWARDHHSRLRIGILAGFLLAAAGYIVL
GTSTSLTIAICAVVAAHAGSSTNWVFSSTLLQVYTEDRFRGRVFSADYGLCMLGISASSYLAGAAIDFGIPPRNFAIAIG
LVMFVPAAAWAIALKRTSETRTRDRVADKSDV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46691; Mature: 46691

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAAYFTLLCRNRNYRLLWVAQIVSELGDWFYTLAVYHLLLELTGSKAQAVAFAVVLQVL
CHHHHEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PSTLAAPTAGVINDRLSRKRIMIGADVVRFFIVLGMLLVRTPSMVWLVYPLLFVETIAAA
HHHHCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FFEPAHSAVIPNIVPEDQVLAANALASVTWSFCLAAGAALGGLLAAWLGRDAVFIVNAFS
HHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FLASAWLIRRMTFNEPHAAGLPPLRPRELFEFTQVLEGFRYIRSQPRLFATVFVKGGLGL
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEE
LGANNVLLPILGERVFPVKLAGLDHDRASLLGMSMLMGARGAGALIGPLASGRWARDHHS
ECCCCEEHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
RLRIGILAGFLLAAAGYIVLGTSTSLTIAICAVVAAHAGSSTNWVFSSTLLQVYTEDRFR
HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GRVFSADYGLCMLGISASSYLAGAAIDFGIPPRNFAIAIGLVMFVPAAAWAIALKRTSET
CEEEECCCCEEEEECCHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
RTRDRVADKSDV
HHHHHCCCCCCC
>Mature Secondary Structure
MFAAYFTLLCRNRNYRLLWVAQIVSELGDWFYTLAVYHLLLELTGSKAQAVAFAVVLQVL
CHHHHEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PSTLAAPTAGVINDRLSRKRIMIGADVVRFFIVLGMLLVRTPSMVWLVYPLLFVETIAAA
HHHHCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FFEPAHSAVIPNIVPEDQVLAANALASVTWSFCLAAGAALGGLLAAWLGRDAVFIVNAFS
HHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FLASAWLIRRMTFNEPHAAGLPPLRPRELFEFTQVLEGFRYIRSQPRLFATVFVKGGLGL
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEE
LGANNVLLPILGERVFPVKLAGLDHDRASLLGMSMLMGARGAGALIGPLASGRWARDHHS
ECCCCEEHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
RLRIGILAGFLLAAAGYIVLGTSTSLTIAICAVVAAHAGSSTNWVFSSTLLQVYTEDRFR
HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GRVFSADYGLCMLGISASSYLAGAAIDFGIPPRNFAIAIGLVMFVPAAAWAIALKRTSET
CEEEECCCCEEEEECCHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
RTRDRVADKSDV
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]