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The map label for this gene is cynT [H]

Identifier: 116624882

GI number: 116624882

Start: 7274007

End: 7274735

Strand: Direct

Name: cynT [H]

Synonym: Acid_5806

Alternate gene names: 116624882

Gene position: 7274007-7274735 (Clockwise)

Preceding gene: 116624881

Following gene: 116624885

Centisome position: 72.99

GC content: 61.87

Gene sequence:

>729_bases
GTGGACCGTAACAAAGAAATTAATATCGAGTGCAGGCAGGGTCGCCGGCGCTTTCTGACAGTTTTCGCGGCAGCGGGAGC
GGGATTCGCCGCGGCCGGTTCAGGCAATGCCGACACGCTCACAAAGACACAGCGCGACAACATGACACCCGACGAAATCA
TCAGGGTCATGAAGGCAGGCAATGAGCGCTTTCGCGGCAACGCCAGGGTTTCGCGCGACTACATCGCCGAGCAGACTGCC
GCGGCCAAGGGCCAGCACCCCGCCGCCGTCATTCTCAGCTGCATCGACTCGCGTGCGCCCGCGGAGGTCATCCTGGATCT
CGGCATCGGCGACGTGTTCAACTCGCGCGTGGCAGGCAACATCTCCAATGACGACATCCTGGGCAGCATGGAGTTCGCCT
GCAAAGTGGCCGGCGCGAAAGTCGTCCTCGTGATGGGGCACACCGCGTGCGGTGCGGTCCAAGGCGCGATCGACGGCGTC
AAACTCGGGAATCTCACCGGCCTGTTGGCCAAGATTCAGCCTGCGGTCGGCGCCACCATTTTCCCGGGCGACCGTTCGTC
CAGCAACCCGGACTTCGTGGATGCCGTGGCCAGGAAAAATGTCGAACTGACAATCGCCTCGATCCGTCGGAACAGCACGA
TCCTCCGCGATCTGGAATCCGCGAAGACCATAAAGATCGTGGGAGCGATCTACAATCTGGGGACCGGCGGGGTGGACTTC
TTCTCCTGA

Upstream 100 bases:

>100_bases
TTCTCGAGGTGTGGTTGGGCAACGCATCTCAAAATTGGTCCCTTTCCGCGAAAAAGCGAATCAGAAACGAAAGAACCTAC
CCGGAAAAGGAGGGGGTTTC

Downstream 100 bases:

>100_bases
CGATTACCAGCGGCCGAAGTGGGCGCCGCCATCGACATACAGGATGTGACCGGTCACCGTCGCCGCGCTCGTCAGGTACA
TCACGGCATCCGCAATGTCA

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDRNKEINIECRQGRRRFLTVFAAAGAGFAAAGSGNADTLTKTQRDNMTPDEIIRVMKAGNERFRGNARVSRDYIAEQTA
AAKGQHPAAVILSCIDSRAPAEVILDLGIGDVFNSRVAGNISNDDILGSMEFACKVAGAKVVLVMGHTACGAVQGAIDGV
KLGNLTGLLAKIQPAVGATIFPGDRSSSNPDFVDAVARKNVELTIASIRRNSTILRDLESAKTIKIVGAIYNLGTGGVDF
FS

Sequences:

>Translated_242_residues
MDRNKEINIECRQGRRRFLTVFAAAGAGFAAAGSGNADTLTKTQRDNMTPDEIIRVMKAGNERFRGNARVSRDYIAEQTA
AAKGQHPAAVILSCIDSRAPAEVILDLGIGDVFNSRVAGNISNDDILGSMEFACKVAGAKVVLVMGHTACGAVQGAIDGV
KLGNLTGLLAKIQPAVGATIFPGDRSSSNPDFVDAVARKNVELTIASIRRNSTILRDLESAKTIKIVGAIYNLGTGGVDF
FS
>Mature_242_residues
MDRNKEINIECRQGRRRFLTVFAAAGAGFAAAGSGNADTLTKTQRDNMTPDEIIRVMKAGNERFRGNARVSRDYIAEQTA
AAKGQHPAAVILSCIDSRAPAEVILDLGIGDVFNSRVAGNISNDDILGSMEFACKVAGAKVVLVMGHTACGAVQGAIDGV
KLGNLTGLLAKIQPAVGATIFPGDRSSSNPDFVDAVARKNVELTIASIRRNSTILRDLESAKTIKIVGAIYNLGTGGVDF
FS

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 25482; Mature: 25482

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNKEINIECRQGRRRFLTVFAAAGAGFAAAGSGNADTLTKTQRDNMTPDEIIRVMKAG
CCCCCEEEEEHHCCCCEEEEEEEECCCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHCC
NERFRGNARVSRDYIAEQTAAAKGQHPAAVILSCIDSRAPAEVILDLGIGDVFNSRVAGN
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHEEEECCCCHHHCCCCCCC
ISNDDILGSMEFACKVAGAKVVLVMGHTACGAVQGAIDGVKLGNLTGLLAKIQPAVGATI
CCCCCCCCHHHHHEEECCCEEEEEECCCHHHHHHHCCCCEEECCHHHHHHHHHHHHCCEE
FPGDRSSSNPDFVDAVARKNVELTIASIRRNSTILRDLESAKTIKIVGAIYNLGTGGVDF
CCCCCCCCCCHHHHHHHHCCCEEEEEEHHCCHHHHHHHHCCCEEEEEEHHHHCCCCCCCC
FS
CC
>Mature Secondary Structure
MDRNKEINIECRQGRRRFLTVFAAAGAGFAAAGSGNADTLTKTQRDNMTPDEIIRVMKAG
CCCCCEEEEEHHCCCCEEEEEEEECCCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHCC
NERFRGNARVSRDYIAEQTAAAKGQHPAAVILSCIDSRAPAEVILDLGIGDVFNSRVAGN
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHEEEECCCCHHHCCCCCCC
ISNDDILGSMEFACKVAGAKVVLVMGHTACGAVQGAIDGVKLGNLTGLLAKIQPAVGATI
CCCCCCCCHHHHHEEECCCEEEEEECCCHHHHHHHCCCCEEECCHHHHHHHHHHHHCCEE
FPGDRSSSNPDFVDAVARKNVELTIASIRRNSTILRDLESAKTIKIVGAIYNLGTGGVDF
CCCCCCCCCCHHHHHHHHCCCEEEEEEHHCCHHHHHHHHCCCEEEEEEHHHHCCCCCCCC
FS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]