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The map label for this gene is ywhC [H]

Identifier: 116624842

GI number: 116624842

Start: 7222504

End: 7223130

Strand: Reverse

Name: ywhC [H]

Synonym: Acid_5766

Alternate gene names: 116624842

Gene position: 7223130-7222504 (Counterclockwise)

Preceding gene: 116624844

Following gene: 116624841

Centisome position: 72.48

GC content: 62.84

Gene sequence:

>627_bases
ATGCATCTGCAAATCGCCGAAGCCATCTCTAATGTATTACTGCTGTGGATCATCACGGCGCCGCATGAATTCGCGCACGC
CTGGGTGGCCACCAGGCTCGGCGACGATACACCGCGCCTCCAGGGACGCGTCACGCTCAATCCGCTCGCGCACGTCGATT
GGATCGGCACCGCGCTCCTGCCTTTCATCACCTCGATGATGGGCGCCGGGTTTCTTGGCTGGGGCCGCCCGGTGTACACC
GACAATAACAAGCTCAAGGGCGGAATGAACGGACTCGCGCTGGTCGCAATGGCGGGACCGTTCAGCAACGTAATCCTGGC
CGTGATCATGGCGGCGGTCGCGGTGGCTGCGCAGACTTCCGTGCCCGCGCTCTCCGAGTTCGCCAGCCGCGGCGTTATGC
TCAGCCTCTATCTGGCGCTTTTCAACATGCTCCCGATTCCGCCGCTGGATGGCTCCAAGCTGCTGCTGGCGGCGCGCATC
CCGATGCGGGTTTACGTGGAGCTCGCGCGCATGGGACTGATCCTGCTGGTAGCCGTGATTTCCTTCACCGATATCGGACG
CTGGATGAGCGACTGGAGCTTTCGCGGCGCGCACGCCATCCTGATGCTTATGGCCGGCCGCTCATAA

Upstream 100 bases:

>100_bases
CAAACTACAATAAAGATAGCGTGGTGCAACGGGTGATCTTCTTTACGGCAGTGGTCGCGCTGCTCGGTCTGTGGGCGGCT
ATCGCGCGCCGGGAACAATA

Downstream 100 bases:

>100_bases
ATCGCGCGCAGTGCGTTACCGTAGTTTCATGAAGCGGATTGCGATCGCAACGTCGGACGGTGTTTCCGTTTGCGATCATT
TGGCGCGCGCTGCGGCCTTT

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MHLQIAEAISNVLLLWIITAPHEFAHAWVATRLGDDTPRLQGRVTLNPLAHVDWIGTALLPFITSMMGAGFLGWGRPVYT
DNNKLKGGMNGLALVAMAGPFSNVILAVIMAAVAVAAQTSVPALSEFASRGVMLSLYLALFNMLPIPPLDGSKLLLAARI
PMRVYVELARMGLILLVAVISFTDIGRWMSDWSFRGAHAILMLMAGRS

Sequences:

>Translated_208_residues
MHLQIAEAISNVLLLWIITAPHEFAHAWVATRLGDDTPRLQGRVTLNPLAHVDWIGTALLPFITSMMGAGFLGWGRPVYT
DNNKLKGGMNGLALVAMAGPFSNVILAVIMAAVAVAAQTSVPALSEFASRGVMLSLYLALFNMLPIPPLDGSKLLLAARI
PMRVYVELARMGLILLVAVISFTDIGRWMSDWSFRGAHAILMLMAGRS
>Mature_208_residues
MHLQIAEAISNVLLLWIITAPHEFAHAWVATRLGDDTPRLQGRVTLNPLAHVDWIGTALLPFITSMMGAGFLGWGRPVYT
DNNKLKGGMNGLALVAMAGPFSNVILAVIMAAVAVAAQTSVPALSEFASRGVMLSLYLALFNMLPIPPLDGSKLLLAARI
PMRVYVELARMGLILLVAVISFTDIGRWMSDWSFRGAHAILMLMAGRS

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22463; Mature: 22463

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLQIAEAISNVLLLWIITAPHEFAHAWVATRLGDDTPRLQGRVTLNPLAHVDWIGTALL
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHH
PFITSMMGAGFLGWGRPVYTDNNKLKGGMNGLALVAMAGPFSNVILAVIMAAVAVAAQTS
HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCC
VPALSEFASRGVMLSLYLALFNMLPIPPLDGSKLLLAARIPMRVYVELARMGLILLVAVI
CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SFTDIGRWMSDWSFRGAHAILMLMAGRS
HHHHHHHHHHCCCCCHHHHHHHEECCCC
>Mature Secondary Structure
MHLQIAEAISNVLLLWIITAPHEFAHAWVATRLGDDTPRLQGRVTLNPLAHVDWIGTALL
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHH
PFITSMMGAGFLGWGRPVYTDNNKLKGGMNGLALVAMAGPFSNVILAVIMAAVAVAAQTS
HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCC
VPALSEFASRGVMLSLYLALFNMLPIPPLDGSKLLLAARIPMRVYVELARMGLILLVAVI
CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SFTDIGRWMSDWSFRGAHAILMLMAGRS
HHHHHHHHHHCCCCCHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]