| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624828
Identifier: 116624828
GI number: 116624828
Start: 7206286
End: 7206804
Strand: Reverse
Name: 116624828
Synonym: Acid_5752
Alternate gene names: NA
Gene position: 7206804-7206286 (Counterclockwise)
Preceding gene: 116624829
Following gene: 116624827
Centisome position: 72.32
GC content: 57.8
Gene sequence:
>519_bases ATGCTTAAGCGTCCCGTCAATTCGAGCCGTTTGATGAAAATTCGTGTCAAGGTGGACACCGAACGCTCTGCCGGTATTTT CCTGCTCGCGTGTATGCTGGTACTGCCTACATTCGCCGCGGGAGATCCGTTCTCCGGCACCTGGAAGTTGAACGTCGCGA AATCCAAGTTGCAATCGCCGGCGCCCGAGAGCGACACCGTGCGCATCGAAATCGAGGGCAACGATCTAACCATTCAACAG GAAGGCGTGGACGACAAGGGTGAGCCCTTCAAGTTGACCGTGCAGGGCGGTTTCGACGACAGCCGCTACGGAATCACCGG ATCCCGGTATGCGGACGCGATCTCCTTCCGGCGTCCCGGCGGCCGGCATATCGTGGCGGAGGTGAGGAAGGCCGGAGTCG CGGTGGCGTGGTTTGACGCCGAGGTTTCCGGAAATACTATGAAGGTCAATTTCTCTGTACTTGATCCGGAGGGGAAAGAA GTCAAGTCTCTCGCGGTATTGCAACGGGACAACCCTTGA
Upstream 100 bases:
>100_bases AGCCTGGCCAGCAAACGTGAGGTGCGCCGAAGTTTCCGGGGCACCTCACTTTCATTCGCGGGAGCGCCCCGGAGTCAGGA GTTGGGATCAGGCGTTACCC
Downstream 100 bases:
>100_bases GCGGGGCGGGTCGCAACTCCGGTTTTCATCCACATAAAAGCAGCGCAGCAATGGCTTGAAAGAAGAATTTCTCGCAGAGA CCGCAAAGAACGCAGAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLKRPVNSSRLMKIRVKVDTERSAGIFLLACMLVLPTFAAGDPFSGTWKLNVAKSKLQSPAPESDTVRIEIEGNDLTIQQ EGVDDKGEPFKLTVQGGFDDSRYGITGSRYADAISFRRPGGRHIVAEVRKAGVAVAWFDAEVSGNTMKVNFSVLDPEGKE VKSLAVLQRDNP
Sequences:
>Translated_172_residues MLKRPVNSSRLMKIRVKVDTERSAGIFLLACMLVLPTFAAGDPFSGTWKLNVAKSKLQSPAPESDTVRIEIEGNDLTIQQ EGVDDKGEPFKLTVQGGFDDSRYGITGSRYADAISFRRPGGRHIVAEVRKAGVAVAWFDAEVSGNTMKVNFSVLDPEGKE VKSLAVLQRDNP >Mature_172_residues MLKRPVNSSRLMKIRVKVDTERSAGIFLLACMLVLPTFAAGDPFSGTWKLNVAKSKLQSPAPESDTVRIEIEGNDLTIQQ EGVDDKGEPFKLTVQGGFDDSRYGITGSRYADAISFRRPGGRHIVAEVRKAGVAVAWFDAEVSGNTMKVNFSVLDPEGKE VKSLAVLQRDNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18797; Mature: 18797
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRPVNSSRLMKIRVKVDTERSAGIFLLACMLVLPTFAAGDPFSGTWKLNVAKSKLQSP CCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCC APESDTVRIEIEGNDLTIQQEGVDDKGEPFKLTVQGGFDDSRYGITGSRYADAISFRRPG CCCCCEEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHEEEECCCC GRHIVAEVRKAGVAVAWFDAEVSGNTMKVNFSVLDPEGKEVKSLAVLQRDNP CCHHHHHHHHCCEEEEEEECEECCCEEEEEEEEECCCCCCEEEEEEEECCCC >Mature Secondary Structure MLKRPVNSSRLMKIRVKVDTERSAGIFLLACMLVLPTFAAGDPFSGTWKLNVAKSKLQSP CCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCC APESDTVRIEIEGNDLTIQQEGVDDKGEPFKLTVQGGFDDSRYGITGSRYADAISFRRPG CCCCCEEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHEEEECCCC GRHIVAEVRKAGVAVAWFDAEVSGNTMKVNFSVLDPEGKEVKSLAVLQRDNP CCHHHHHHHHCCEEEEEEECEECCCEEEEEEEEECCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA