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The map label for this gene is 116624813

Identifier: 116624813

GI number: 116624813

Start: 7186666

End: 7187256

Strand: Direct

Name: 116624813

Synonym: Acid_5737

Alternate gene names: NA

Gene position: 7186666-7187256 (Clockwise)

Preceding gene: 116624812

Following gene: 116624814

Centisome position: 72.11

GC content: 65.82

Gene sequence:

>591_bases
GTGGACGTCGTATTAGGGGTTGTGCAGCCAGAGGAAATCGCGTTCGAGCAGGCGGGGCCTCCGGTGGCCGGCAAAGATCG
AATTGCCGTGTCGGTGGAGGTGTTGTTCCGCGAGCACTATGCTCGTATCGTCGGCATGCTGGCCCGGCTGACAGGCGACC
GCGCCCACTCCGAGGAAATCGCGTCCGACGTTTTTCACAAGCTCTCGCAGCGGCCGGCGCTGCTCCATGGCGCCGACGAT
CTGACTGCCTGGCTCTACCGGGTCGCGACCAACGCGGGCTTCGACGCCTTGCGTACCAATTCCCGGAGGCGCAAACGGGA
AGAGGCGGCGGGCAGCGCGGGGATCCATGCAACGGCGCCGGACGCACTCGATGCCCTGCTGGCGGAGGAACGGCGCGCGC
GGGTGCGCGAGGTGCTCGGTTCGCTCAAGCCGCGCGACGCGCAACTGCTGCTGCTTCGCGCAAGCGGCCTCGCTTATCGG
GAACTGGCGGCGACATTGGGGATTGAACCCGGGTCGGTGGGCACTATGCTGGCCAGGGCGGAAGCGGAATTCGAAAGGAA
GTTTCGCGCACGTTACGGAGAACAGGTATGA

Upstream 100 bases:

>100_bases
CTCGGGTGAAGTGCCTTACGATTTCAACATCTTGCGCCGTGATCTGGGCCTGAAGGACGATTAACCCCTGCCGGAGCGTT
TTTCCTGTCACAATTTCGGA

Downstream 100 bases:

>100_bases
CGCAATGTTGGTCGGAAGGCACGCTTCGGGCGTACCTGGATCGTGAACTGCCTCCCGAGCAGATTGGCCAGGTCGCGGCG
CATTTGAAGGAATGCGTAAG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigX

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDVVLGVVQPEEIAFEQAGPPVAGKDRIAVSVEVLFREHYARIVGMLARLTGDRAHSEEIASDVFHKLSQRPALLHGADD
LTAWLYRVATNAGFDALRTNSRRRKREEAAGSAGIHATAPDALDALLAEERRARVREVLGSLKPRDAQLLLLRASGLAYR
ELAATLGIEPGSVGTMLARAEAEFERKFRARYGEQV

Sequences:

>Translated_196_residues
MDVVLGVVQPEEIAFEQAGPPVAGKDRIAVSVEVLFREHYARIVGMLARLTGDRAHSEEIASDVFHKLSQRPALLHGADD
LTAWLYRVATNAGFDALRTNSRRRKREEAAGSAGIHATAPDALDALLAEERRARVREVLGSLKPRDAQLLLLRASGLAYR
ELAATLGIEPGSVGTMLARAEAEFERKFRARYGEQV
>Mature_196_residues
MDVVLGVVQPEEIAFEQAGPPVAGKDRIAVSVEVLFREHYARIVGMLARLTGDRAHSEEIASDVFHKLSQRPALLHGADD
LTAWLYRVATNAGFDALRTNSRRRKREEAAGSAGIHATAPDALDALLAEERRARVREVLGSLKPRDAQLLLLRASGLAYR
ELAATLGIEPGSVGTMLARAEAEFERKFRARYGEQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21467; Mature: 21467

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVLGVVQPEEIAFEQAGPPVAGKDRIAVSVEVLFREHYARIVGMLARLTGDRAHSEEI
CCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ASDVFHKLSQRPALLHGADDLTAWLYRVATNAGFDALRTNSRRRKREEAAGSAGIHATAP
HHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCCCCH
DALDALLAEERRARVREVLGSLKPRDAQLLLLRASGLAYRELAATLGIEPGSVGTMLARA
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHH
EAEFERKFRARYGEQV
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDVVLGVVQPEEIAFEQAGPPVAGKDRIAVSVEVLFREHYARIVGMLARLTGDRAHSEEI
CCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ASDVFHKLSQRPALLHGADDLTAWLYRVATNAGFDALRTNSRRRKREEAAGSAGIHATAP
HHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCCCCH
DALDALLAEERRARVREVLGSLKPRDAQLLLLRASGLAYRELAATLGIEPGSVGTMLARA
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHH
EAEFERKFRARYGEQV
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA