| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624812
Identifier: 116624812
GI number: 116624812
Start: 7183957
End: 7186629
Strand: Direct
Name: 116624812
Synonym: Acid_5736
Alternate gene names: NA
Gene position: 7183957-7186629 (Clockwise)
Preceding gene: 116624809
Following gene: 116624813
Centisome position: 72.09
GC content: 61.28
Gene sequence:
>2673_bases GTGAGGACGCGGCATCCGGAAACAAATAGTAAGCTGAAATCGATGCTCTACTACACGAAGGATGTGGCCAGGAAAATCAA GGAAATCGCGCGCCTGGTAGAGCGCAACAAACTGGATCCGGCTGAAGGTGCCAGACGGATACTGGCGTTGGAACCGGATT TCCCCGCGGCGATCCTAATGACCGGCGAACTGTTGAAGAAGGCCGACGACTTGAACCGGGCGGAGGAGTTCTTGTGGAAC GGCCTCTCGCGATGCCCTTGTTACCCGCCGCTCTATTATTCGCTGGCCGGCGTCATCGCGCGTCTTAGACCTGGCGACCC GGCTATGGGGTGGCTGCTGGTGATCGCATTTCAGAAGCTCTCGTTATCTGCGGAGATCAGTCCCCTCTGTGCCCAATTGA TGGCACCAGCCGTAGAGAATACAGGCCCGGCCACCGATCCGCAAACGTATGCGGACCAGGCCGAACTCGTCGCAGGTCTG CTCGAGGGTCGCGAGGAGCACATTGACGAGCGGCTGGGCCAATACCGGGTACTGAACGATTTGCAAATCGAATCCGACCT GGACTTGGACCCCGAGACGCTCCACGAAGTTCTGGAGCAACCCGCGACGTATGCGCCCTTGCTGTACGGCGCAATACGCG AATGGGCCAATATGGATCGGGAAACGAGCACCCTGCCTCCGGCGGTGTTGCGAATTTTCATCGCCATTCTGGGAGAGATC GGCGGCCCGGAACGAATCTCCGATCTGCTGGAGTTATCGCAGATCGGGGACGAGCCAACGTTTTTTCATGTGCATTGGGC GATCTACCGGCTCGGCCAGCGGTTCCCGTCGGCGGCGTTGGCGACCTTTCGCGCGGCCGCAAAGGGCGCTCATGGTGGAA TGCTCTGTGCCCTGGCGGAGCAGCTCAATTTGCTGCCCGAGGTGGAAGGCCTGCTACCAGCCCTGCGGTCGCTGTTGGAG GAATTCCACCGGATCGCGCGGGATCACAACGCGCCGTACTTGCTCGCGGTCGTGGCCGATGCCATGGCCGAGCGGGGTGC GGTGGACGAGGCCCAGTCCGTTCTGACGCGCAATCAGGCACTGTTGACCAGGGAGGGGCGCGAATGGCTAAAGGAATCGA TCGACGGCGATTCGGAATTCGTGCCGCGCCTGGTCGAAGAGGATATCCCCAACTTCTCCATCCAGGAAGTCTGCCTGGAA CGCGTCTACATGGATGACGAGAAGGACGACGAAGACGAGGACTTTGACGACGAAGACGAGCTCGAGGATGAAGGCGAGTT CGAGGATGAAGGCGAGTGCGAGGATGAAGGCGAGTTCGAACCCGAGGTTCCCTTCTCGCCCCGGGTGGGACGCAACGACC CGTGCTGGTGCGGCAGCGGTAAGAAGTACAAGAAGTGCCATCTTCGTGCGGACGAGGAAGCCCACCTTACGGGTGCCCGG CCAGCCGCTTCGTCCGAGGAGCCCTTGCCGCTCCGCATGCTCAAGGGCTTGGCGCGCTGGCACAAAGAGGCGGATCGCAC TCGCGCGCAGGAGATGTTCTTCGGAACTGCCGAAGACAAGGCGCGCGACGAGACTGAATTCGATGCCTTCGTGCAATTCC TGCTCCATGATTTCCGCGACGCGGAGACCAGGCGTACGCTGATCGAGCACTTTCTGGACGAACACGGCCCACGGCTCTCG CCGAAAGACCGGGCGGTTGCGGAATCGATGCGCGATAGCCGCTTCGGCCTGTACGAGATATTCAAGGTTGAAAAGGGGCG CGGTATTCACGTCCGCGACGTATTCGACGGAGCCACGTTCTTCGTTGAAGACATCACATCATCGCGTGAATGCGTAAAAG ACGATTGCGCGCTGCTCCGCGTGGAACTCCGCGACGGACGCTACATGCTCTCCGGGAATGGCACTGCGGTAGCGCGCGAG TTGCTCGGCGAGATGAAGGAGTTCGTCAGCGCGGAGAGCAAGGCCGCCGGAAAAAGCCCGGCCGAATTCGCGCGTGCCAA CAGCGCCCTTTTGCGCCGTCATTATCTCGAACTCCACGCCAGGCGTTTCGAGAACCTGAGAGTCGTGAACTCGGAAGGCG ATGAGCTGGAGTTTTGGACGGCCGAATACGAGGTGTTGGACCGGCCGGCTCTTATTCTCGCGCTGCGCTCGCTCGCGGAA CTGGTCGAGGAGCCGTCCAAGGACTCGGCCGCCCATTTCGGGTGGATGGAACCCGGCGAAGGGCCGCGATCGGTGCACGG CTCCATCGAAGTCACGGAAACGCGCCTGCGACTGGAGACCACGTCGCTCAAATACCGGGAACTCGGACGGGGCATGCTGG AGTACAACGCTCCGCGCCTGCTGAAGCATCTGGGCGACAGATTGACTAGCGTTGACGATCTCAAGCGCAGTGCCTTGTCT GGCGCCCGTGGACCAACGCCGCTGCCCTCCGAGGAGGAGCGGGCCGCGATCCAGCAGTACAAGGCGCAGCACTACTCCAC CTGGCCCAATATTGCATTGCCAGCCCTGAAGGGCCAAACACCGCGCCAGGCGATGAGGACCAATGCCGGGCGCGAGGCTC TCCGCAACCTCCTGCGCGACATGGAGCATCAGGAGGCGCGCTCGGCACGCTCGGGTGAAGTGCCTTACGATTTCAACATC TTGCGCCGTGATCTGGGCCTGAAGGACGATTAA
Upstream 100 bases:
>100_bases TGTCTACTTCCAGATTGAGGCTGTTGACCGCGGTGAAGTCCCCAAAGCGGCGCGTCAGATTGCGGCAAGAGATCATTACT TCCTATTGTGACGCACACTA
Downstream 100 bases:
>100_bases CCCCTGCCGGAGCGTTTTTCCTGTCACAATTTCGGAGTGGACGTCGTATTAGGGGTTGTGCAGCCAGAGGAAATCGCGTT CGAGCAGGCGGGGCCTCCGG
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain Protein; TPR Repeat-Containing Protein; Protein Translocase
Number of amino acids: Translated: 890; Mature: 890
Protein sequence:
>890_residues MRTRHPETNSKLKSMLYYTKDVARKIKEIARLVERNKLDPAEGARRILALEPDFPAAILMTGELLKKADDLNRAEEFLWN GLSRCPCYPPLYYSLAGVIARLRPGDPAMGWLLVIAFQKLSLSAEISPLCAQLMAPAVENTGPATDPQTYADQAELVAGL LEGREEHIDERLGQYRVLNDLQIESDLDLDPETLHEVLEQPATYAPLLYGAIREWANMDRETSTLPPAVLRIFIAILGEI GGPERISDLLELSQIGDEPTFFHVHWAIYRLGQRFPSAALATFRAAAKGAHGGMLCALAEQLNLLPEVEGLLPALRSLLE EFHRIARDHNAPYLLAVVADAMAERGAVDEAQSVLTRNQALLTREGREWLKESIDGDSEFVPRLVEEDIPNFSIQEVCLE RVYMDDEKDDEDEDFDDEDELEDEGEFEDEGECEDEGEFEPEVPFSPRVGRNDPCWCGSGKKYKKCHLRADEEAHLTGAR PAASSEEPLPLRMLKGLARWHKEADRTRAQEMFFGTAEDKARDETEFDAFVQFLLHDFRDAETRRTLIEHFLDEHGPRLS PKDRAVAESMRDSRFGLYEIFKVEKGRGIHVRDVFDGATFFVEDITSSRECVKDDCALLRVELRDGRYMLSGNGTAVARE LLGEMKEFVSAESKAAGKSPAEFARANSALLRRHYLELHARRFENLRVVNSEGDELEFWTAEYEVLDRPALILALRSLAE LVEEPSKDSAAHFGWMEPGEGPRSVHGSIEVTETRLRLETTSLKYRELGRGMLEYNAPRLLKHLGDRLTSVDDLKRSALS GARGPTPLPSEEERAAIQQYKAQHYSTWPNIALPALKGQTPRQAMRTNAGREALRNLLRDMEHQEARSARSGEVPYDFNI LRRDLGLKDD
Sequences:
>Translated_890_residues MRTRHPETNSKLKSMLYYTKDVARKIKEIARLVERNKLDPAEGARRILALEPDFPAAILMTGELLKKADDLNRAEEFLWN GLSRCPCYPPLYYSLAGVIARLRPGDPAMGWLLVIAFQKLSLSAEISPLCAQLMAPAVENTGPATDPQTYADQAELVAGL LEGREEHIDERLGQYRVLNDLQIESDLDLDPETLHEVLEQPATYAPLLYGAIREWANMDRETSTLPPAVLRIFIAILGEI GGPERISDLLELSQIGDEPTFFHVHWAIYRLGQRFPSAALATFRAAAKGAHGGMLCALAEQLNLLPEVEGLLPALRSLLE EFHRIARDHNAPYLLAVVADAMAERGAVDEAQSVLTRNQALLTREGREWLKESIDGDSEFVPRLVEEDIPNFSIQEVCLE RVYMDDEKDDEDEDFDDEDELEDEGEFEDEGECEDEGEFEPEVPFSPRVGRNDPCWCGSGKKYKKCHLRADEEAHLTGAR PAASSEEPLPLRMLKGLARWHKEADRTRAQEMFFGTAEDKARDETEFDAFVQFLLHDFRDAETRRTLIEHFLDEHGPRLS PKDRAVAESMRDSRFGLYEIFKVEKGRGIHVRDVFDGATFFVEDITSSRECVKDDCALLRVELRDGRYMLSGNGTAVARE LLGEMKEFVSAESKAAGKSPAEFARANSALLRRHYLELHARRFENLRVVNSEGDELEFWTAEYEVLDRPALILALRSLAE LVEEPSKDSAAHFGWMEPGEGPRSVHGSIEVTETRLRLETTSLKYRELGRGMLEYNAPRLLKHLGDRLTSVDDLKRSALS GARGPTPLPSEEERAAIQQYKAQHYSTWPNIALPALKGQTPRQAMRTNAGREALRNLLRDMEHQEARSARSGEVPYDFNI LRRDLGLKDD >Mature_890_residues MRTRHPETNSKLKSMLYYTKDVARKIKEIARLVERNKLDPAEGARRILALEPDFPAAILMTGELLKKADDLNRAEEFLWN GLSRCPCYPPLYYSLAGVIARLRPGDPAMGWLLVIAFQKLSLSAEISPLCAQLMAPAVENTGPATDPQTYADQAELVAGL LEGREEHIDERLGQYRVLNDLQIESDLDLDPETLHEVLEQPATYAPLLYGAIREWANMDRETSTLPPAVLRIFIAILGEI GGPERISDLLELSQIGDEPTFFHVHWAIYRLGQRFPSAALATFRAAAKGAHGGMLCALAEQLNLLPEVEGLLPALRSLLE EFHRIARDHNAPYLLAVVADAMAERGAVDEAQSVLTRNQALLTREGREWLKESIDGDSEFVPRLVEEDIPNFSIQEVCLE RVYMDDEKDDEDEDFDDEDELEDEGEFEDEGECEDEGEFEPEVPFSPRVGRNDPCWCGSGKKYKKCHLRADEEAHLTGAR PAASSEEPLPLRMLKGLARWHKEADRTRAQEMFFGTAEDKARDETEFDAFVQFLLHDFRDAETRRTLIEHFLDEHGPRLS PKDRAVAESMRDSRFGLYEIFKVEKGRGIHVRDVFDGATFFVEDITSSRECVKDDCALLRVELRDGRYMLSGNGTAVARE LLGEMKEFVSAESKAAGKSPAEFARANSALLRRHYLELHARRFENLRVVNSEGDELEFWTAEYEVLDRPALILALRSLAE LVEEPSKDSAAHFGWMEPGEGPRSVHGSIEVTETRLRLETTSLKYRELGRGMLEYNAPRLLKHLGDRLTSVDDLKRSALS GARGPTPLPSEEERAAIQQYKAQHYSTWPNIALPALKGQTPRQAMRTNAGREALRNLLRDMEHQEARSARSGEVPYDFNI LRRDLGLKDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100547; Mature: 100547
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRHPETNSKLKSMLYYTKDVARKIKEIARLVERNKLDPAEGARRILALEPDFPAAILM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHH TGELLKKADDLNRAEEFLWNGLSRCPCYPPLYYSLAGVIARLRPGDPAMGWLLVIAFQKL HHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SLSAEISPLCAQLMAPAVENTGPATDPQTYADQAELVAGLLEGREEHIDERLGQYRVLND HCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQIESDLDLDPETLHEVLEQPATYAPLLYGAIREWANMDRETSTLPPAVLRIFIAILGEI CEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC GGPERISDLLELSQIGDEPTFFHVHWAIYRLGQRFPSAALATFRAAAKGAHGGMLCALAE CCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHH QLNLLPEVEGLLPALRSLLEEFHRIARDHNAPYLLAVVADAMAERGAVDEAQSVLTRNQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LLTREGREWLKESIDGDSEFVPRLVEEDIPNFSIQEVCLERVYMDDEKDDEDEDFDDEDE HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHC LEDEGEFEDEGECEDEGEFEPEVPFSPRVGRNDPCWCGSGKKYKKCHLRADEEAHLTGAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC PAASSEEPLPLRMLKGLARWHKEADRTRAQEMFFGTAEDKARDETEFDAFVQFLLHDFRD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHH AETRRTLIEHFLDEHGPRLSPKDRAVAESMRDSRFGLYEIFKVEKGRGIHVRDVFDGATF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEEHHCCHHH FVEDITSSRECVKDDCALLRVELRDGRYMLSGNGTAVARELLGEMKEFVSAESKAAGKSP HHHHHHCHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCH AEFARANSALLRRHYLELHARRFENLRVVNSEGDELEFWTAEYEVLDRPALILALRSLAE HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEHHHHHHCCHHHHHHHHHHHH LVEEPSKDSAAHFGWMEPGEGPRSVHGSIEVTETRLRLETTSLKYRELGRGMLEYNAPRL HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHCCHHHH LKHLGDRLTSVDDLKRSALSGARGPTPLPSEEERAAIQQYKAQHYSTWPNIALPALKGQT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PRQAMRTNAGREALRNLLRDMEHQEARSARSGEVPYDFNILRRDLGLKDD HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MRTRHPETNSKLKSMLYYTKDVARKIKEIARLVERNKLDPAEGARRILALEPDFPAAILM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHH TGELLKKADDLNRAEEFLWNGLSRCPCYPPLYYSLAGVIARLRPGDPAMGWLLVIAFQKL HHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SLSAEISPLCAQLMAPAVENTGPATDPQTYADQAELVAGLLEGREEHIDERLGQYRVLND HCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQIESDLDLDPETLHEVLEQPATYAPLLYGAIREWANMDRETSTLPPAVLRIFIAILGEI CEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC GGPERISDLLELSQIGDEPTFFHVHWAIYRLGQRFPSAALATFRAAAKGAHGGMLCALAE CCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHH QLNLLPEVEGLLPALRSLLEEFHRIARDHNAPYLLAVVADAMAERGAVDEAQSVLTRNQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LLTREGREWLKESIDGDSEFVPRLVEEDIPNFSIQEVCLERVYMDDEKDDEDEDFDDEDE HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHC LEDEGEFEDEGECEDEGEFEPEVPFSPRVGRNDPCWCGSGKKYKKCHLRADEEAHLTGAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC PAASSEEPLPLRMLKGLARWHKEADRTRAQEMFFGTAEDKARDETEFDAFVQFLLHDFRD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHH AETRRTLIEHFLDEHGPRLSPKDRAVAESMRDSRFGLYEIFKVEKGRGIHVRDVFDGATF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEEHHCCHHH FVEDITSSRECVKDDCALLRVELRDGRYMLSGNGTAVARELLGEMKEFVSAESKAAGKSP HHHHHHCHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCH AEFARANSALLRRHYLELHARRFENLRVVNSEGDELEFWTAEYEVLDRPALILALRSLAE HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEHHHHHHCCHHHHHHHHHHHH LVEEPSKDSAAHFGWMEPGEGPRSVHGSIEVTETRLRLETTSLKYRELGRGMLEYNAPRL HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHCCHHHH LKHLGDRLTSVDDLKRSALSGARGPTPLPSEEERAAIQQYKAQHYSTWPNIALPALKGQT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PRQAMRTNAGREALRNLLRDMEHQEARSARSGEVPYDFNILRRDLGLKDD HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA