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The map label for this gene is pqqE [H]

Identifier: 116624751

GI number: 116624751

Start: 7109827

End: 7110858

Strand: Reverse

Name: pqqE [H]

Synonym: Acid_5675

Alternate gene names: 116624751

Gene position: 7110858-7109827 (Counterclockwise)

Preceding gene: 116624752

Following gene: 116624750

Centisome position: 71.35

GC content: 62.4

Gene sequence:

>1032_bases
ATGTCTCACGCCCTACATCTCCGCCGCGCACTCAAGGCAGCGCACCGCCGCGCGCGTGAGATCCAGATGATTGCCAAGGG
GGTGGCGTCCACGGACCACCCCATTCTGGCGCACGTCATTCCTATGCGCCGCTGCAACCTGGCGTGTACGTATTGCAACG
AATACGACGATTTCTCGAAGCCCGTCCCGGTGGAGGAAATGTACCGGCGGCTGGACAAGCTGGCGGACCTCGGGACCACG
ATCATCACGATCTCCGGCGGCGAACCGCTGCTGCATCCCGATCTGGACCTGCTGATCGCGCGCATCCGCAGCCGCGGCAT
GATCGCGGGCATGATTACGAACGGCTACCTGCTGGTGGCCGACCGCATCAAGCGGCTCAATCGCGCGGGGCTGGAGCACC
TGCAAATTTCCATCGACAACGTCATGCCTGACGACGTGTCGAAGAAAAGCCTCAAGGTTCTGGATAAGAAACTCCAGTTG
CTTGCGGATTACGCCGAGTTTCACGTCAACATCAATAGCGTAGTCGGCGGCGGGATCAGCACTCCGCACGATGCGCTGGT
GATCGGCAAGCGCGCGCTCGAGCTCGGCTTCACGTCCACGGTCGGCATCATTCACGATGGCGATGGCCAGTTGCAGCCGC
TCAAGGACGAAGAGCGCGAGGTCTATGCCGCCATGCGCGCGATGGAGAAATCCAGCTACTCGCGCATCAACGGCTTCCAG
GACAACATCGCCTTGGGCAAAGAGAACGAGTGGCGCTGCCGTGCGGGCGCCCGCTATCTTTATATCTGCGAAGAGGGACT
GGTCCACTACTGCTCCCAGCAGCGCGGCTACCCGGGCAAGCCGCTGCTGGAATACACGCTCGAGGATATCCGGCGCGAGT
ACCGCACCGCCAAGGGCTGCGCTCCGCGGTGTACGGTAGCCTGCGTTCACCAGACCGGCACGATCGACCGGTGGCGCGAT
CCGCAGACTCTGCCCGAGGCTCCGATTGGTCCCAGCCACACAGGTCCGCTGGTGCAACTGCAGCAGAAGTAA

Upstream 100 bases:

>100_bases
AACCGCGCTCGCTACCGTTCAACCCCCGTATGCGCCCGATCGCTTCCCGAGTCTCGATCCATTCACCCGATTGTGATGTA
ATGAAAGCTCTTTAGCCCGT

Downstream 100 bases:

>100_bases
GGGCGCGGGCTACACTGGGACATGCGCAAATTGCTGTCTGTTTTGCTTCTGGGCTCATTCCTGCTTTTCGCGGAATCGGT
GGCCGGCGTCAAATGGAGTA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSHALHLRRALKAAHRRAREIQMIAKGVASTDHPILAHVIPMRRCNLACTYCNEYDDFSKPVPVEEMYRRLDKLADLGTT
IITISGGEPLLHPDLDLLIARIRSRGMIAGMITNGYLLVADRIKRLNRAGLEHLQISIDNVMPDDVSKKSLKVLDKKLQL
LADYAEFHVNINSVVGGGISTPHDALVIGKRALELGFTSTVGIIHDGDGQLQPLKDEEREVYAAMRAMEKSSYSRINGFQ
DNIALGKENEWRCRAGARYLYICEEGLVHYCSQQRGYPGKPLLEYTLEDIRREYRTAKGCAPRCTVACVHQTGTIDRWRD
PQTLPEAPIGPSHTGPLVQLQQK

Sequences:

>Translated_343_residues
MSHALHLRRALKAAHRRAREIQMIAKGVASTDHPILAHVIPMRRCNLACTYCNEYDDFSKPVPVEEMYRRLDKLADLGTT
IITISGGEPLLHPDLDLLIARIRSRGMIAGMITNGYLLVADRIKRLNRAGLEHLQISIDNVMPDDVSKKSLKVLDKKLQL
LADYAEFHVNINSVVGGGISTPHDALVIGKRALELGFTSTVGIIHDGDGQLQPLKDEEREVYAAMRAMEKSSYSRINGFQ
DNIALGKENEWRCRAGARYLYICEEGLVHYCSQQRGYPGKPLLEYTLEDIRREYRTAKGCAPRCTVACVHQTGTIDRWRD
PQTLPEAPIGPSHTGPLVQLQQK
>Mature_342_residues
SHALHLRRALKAAHRRAREIQMIAKGVASTDHPILAHVIPMRRCNLACTYCNEYDDFSKPVPVEEMYRRLDKLADLGTTI
ITISGGEPLLHPDLDLLIARIRSRGMIAGMITNGYLLVADRIKRLNRAGLEHLQISIDNVMPDDVSKKSLKVLDKKLQLL
ADYAEFHVNINSVVGGGISTPHDALVIGKRALELGFTSTVGIIHDGDGQLQPLKDEEREVYAAMRAMEKSSYSRINGFQD
NIALGKENEWRCRAGARYLYICEEGLVHYCSQQRGYPGKPLLEYTLEDIRREYRTAKGCAPRCTVACVHQTGTIDRWRDP
QTLPEAPIGPSHTGPLVQLQQK

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38443; Mature: 38312

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHALHLRRALKAAHRRAREIQMIAKGVASTDHPILAHVIPMRRCNLACTYCNEYDDFSK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCC
PVPVEEMYRRLDKLADLGTTIITISGGEPLLHPDLDLLIARIRSRGMIAGMITNGYLLVA
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEH
DRIKRLNRAGLEHLQISIDNVMPDDVSKKSLKVLDKKLQLLADYAEFHVNINSVVGGGIS
HHHHHHHHCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCC
TPHDALVIGKRALELGFTSTVGIIHDGDGQLQPLKDEEREVYAAMRAMEKSSYSRINGFQ
CCCHHHEEHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DNIALGKENEWRCRAGARYLYICEEGLVHYCSQQRGYPGKPLLEYTLEDIRREYRTAKGC
CCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
APRCTVACVHQTGTIDRWRDPQTLPEAPIGPSHTGPLVQLQQK
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
SHALHLRRALKAAHRRAREIQMIAKGVASTDHPILAHVIPMRRCNLACTYCNEYDDFSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCC
PVPVEEMYRRLDKLADLGTTIITISGGEPLLHPDLDLLIARIRSRGMIAGMITNGYLLVA
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEH
DRIKRLNRAGLEHLQISIDNVMPDDVSKKSLKVLDKKLQLLADYAEFHVNINSVVGGGIS
HHHHHHHHCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCC
TPHDALVIGKRALELGFTSTVGIIHDGDGQLQPLKDEEREVYAAMRAMEKSSYSRINGFQ
CCCHHHEEHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DNIALGKENEWRCRAGARYLYICEEGLVHYCSQQRGYPGKPLLEYTLEDIRREYRTAKGC
CCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
APRCTVACVHQTGTIDRWRDPQTLPEAPIGPSHTGPLVQLQQK
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA