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The map label for this gene is nfrB [H]

Identifier: 116624682

GI number: 116624682

Start: 7021780

End: 7023180

Strand: Reverse

Name: nfrB [H]

Synonym: Acid_5606

Alternate gene names: 116624682

Gene position: 7023180-7021780 (Counterclockwise)

Preceding gene: 116624683

Following gene: 116624678

Centisome position: 70.47

GC content: 64.81

Gene sequence:

>1401_bases
GTGCCCGTTGCGGTCTGGATCCTGATCAGCGGCCTGGACGACCTCTTCATTACCATGGTCGGGTTCGCCACCTCTCGCGT
CCGATTTCCGTGGCCTTCTTCCGGGGACTTGAAGAGCGCCGCGGAGCAGCCGATCGCCATCTTCGTGCCTTTGTGGCACG
AGCACCGGGTGATCGGCCGCATGCTGGAGCACAACCTGGCGGCGGTGCGTTACGGCAACTATCACGTGTTCGCGGGAGTG
TATCCCAACGACACGCCGACTCTGCGCGCGGTGGAACTGCAGGCCGCAGTTCATCCGAAGATCCACACAGCCATTTGTCC
GCACGATGGGCCGACATCGAAAGGCGATTGCCTGAACTGGATCTACCAGCACATGCGCGCCTGGGAGGCGCGCCACGGAA
CGCGCTTCCGGGTGGTGGTGTTGCACGACGCCGAAGACCTGATCGACCCCGAGAGCCTGCGGCTGATCAACTGGTTCTCG
CGGGACTATGAGATGGTGCAGGTGCCGGTGCTGCCGCTGGCGACCGCGGTGAAGGAATGGACACACGGCCTGTACTGCGA
CGAGTTCGCGGAATACCAGCGCAAGGATATCCCGGTGCGGCAGCAACTCGGCGGATTTCTGCCCTCCAACGGCGTGGGTA
CCGGTTTCGGCCGCGACGCATTGGAAAGATTGGCCGACGGGCGCAACGGGCGCCCGTTCGACCCGGCCTGCCTCACCGAG
GATTACGAGACGGGCTACCTGCTGCACGAGTTAGGCTGCCGTCAGATTTTTCTGCCGGTGCGCTTCCGCGAGAACGGTCC
CACGGCCACGCGCGAGTTTTTCCCGCGCGGGGCACGCGCGGCCATATCGCAGCGAACGCGATGGGTAACGGGAATCGCCC
TGCAGAGCTGGGAACGGCACGGGTGGCGGGTTCCGCTTTCGCAGCTCTACTGGTTCTGGCGCGACCGCAAGGGCCTGATC
GGCAACCTGCTCTCGCCGGCGGCGAACCTGCTCTTCCTCTACGGCGCGGGAAGTTACGCGTTCTCCACGGGGCATCCCTC
GGCGTGGCACCTCGGTAGCCACATTCCGCCCTGGCTCGCCGGAAGCTGCCGGCTGACGCTGGCGATCGCCGCGCTGCAGA
CGGGAGTGCGCGCGCGATCGGCCGCGCTGATCTACGGCTGGAAGTTCGCGGCGGGAGTTCCGCTGCGCATGGTGTGGGGC
AACCTGGTGAACTTCGCCGCGACCGCGATGGCGCTCTGGGAATTCGGCAATTCACGCAGGCGTGGCGGAGGGCTGGCGTG
GCGGAAAACCGATCATATGTATCCGACAGCGCTGGCTACAAGCGGGGTCCGTTATCAACCGTTGCTGAAGAATCCGATTC
CCGATGTCGCTTCACGCGCCGCAGCAGGGGAATTTTACTAA

Upstream 100 bases:

>100_bases
GCGGGAATAAAAATCTTGAGAATCTGGCCGGGCGCTCCGCACTTGGGTTCTTACGACCATTTCTATCGAGTGGCTTGACC
ATTGGGTTGCCGCGCTTCTT

Downstream 100 bases:

>100_bases
CTACACGGCCGAAGCCCGACTCGTGCTCTCGCACGAGGGGTTCGGGCTCGACTTCCTGTGCGCGCTGCACCACCGGCGCC
GGAGGCGGCGCCTGCCGACG

Product: bacteriophage N4 adsorption protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MPVAVWILISGLDDLFITMVGFATSRVRFPWPSSGDLKSAAEQPIAIFVPLWHEHRVIGRMLEHNLAAVRYGNYHVFAGV
YPNDTPTLRAVELQAAVHPKIHTAICPHDGPTSKGDCLNWIYQHMRAWEARHGTRFRVVVLHDAEDLIDPESLRLINWFS
RDYEMVQVPVLPLATAVKEWTHGLYCDEFAEYQRKDIPVRQQLGGFLPSNGVGTGFGRDALERLADGRNGRPFDPACLTE
DYETGYLLHELGCRQIFLPVRFRENGPTATREFFPRGARAAISQRTRWVTGIALQSWERHGWRVPLSQLYWFWRDRKGLI
GNLLSPAANLLFLYGAGSYAFSTGHPSAWHLGSHIPPWLAGSCRLTLAIAALQTGVRARSAALIYGWKFAAGVPLRMVWG
NLVNFAATAMALWEFGNSRRRGGGLAWRKTDHMYPTALATSGVRYQPLLKNPIPDVASRAAAGEFY

Sequences:

>Translated_466_residues
MPVAVWILISGLDDLFITMVGFATSRVRFPWPSSGDLKSAAEQPIAIFVPLWHEHRVIGRMLEHNLAAVRYGNYHVFAGV
YPNDTPTLRAVELQAAVHPKIHTAICPHDGPTSKGDCLNWIYQHMRAWEARHGTRFRVVVLHDAEDLIDPESLRLINWFS
RDYEMVQVPVLPLATAVKEWTHGLYCDEFAEYQRKDIPVRQQLGGFLPSNGVGTGFGRDALERLADGRNGRPFDPACLTE
DYETGYLLHELGCRQIFLPVRFRENGPTATREFFPRGARAAISQRTRWVTGIALQSWERHGWRVPLSQLYWFWRDRKGLI
GNLLSPAANLLFLYGAGSYAFSTGHPSAWHLGSHIPPWLAGSCRLTLAIAALQTGVRARSAALIYGWKFAAGVPLRMVWG
NLVNFAATAMALWEFGNSRRRGGGLAWRKTDHMYPTALATSGVRYQPLLKNPIPDVASRAAAGEFY
>Mature_465_residues
PVAVWILISGLDDLFITMVGFATSRVRFPWPSSGDLKSAAEQPIAIFVPLWHEHRVIGRMLEHNLAAVRYGNYHVFAGVY
PNDTPTLRAVELQAAVHPKIHTAICPHDGPTSKGDCLNWIYQHMRAWEARHGTRFRVVVLHDAEDLIDPESLRLINWFSR
DYEMVQVPVLPLATAVKEWTHGLYCDEFAEYQRKDIPVRQQLGGFLPSNGVGTGFGRDALERLADGRNGRPFDPACLTED
YETGYLLHELGCRQIFLPVRFRENGPTATREFFPRGARAAISQRTRWVTGIALQSWERHGWRVPLSQLYWFWRDRKGLIG
NLLSPAANLLFLYGAGSYAFSTGHPSAWHLGSHIPPWLAGSCRLTLAIAALQTGVRARSAALIYGWKFAAGVPLRMVWGN
LVNFAATAMALWEFGNSRRRGGGLAWRKTDHMYPTALATSGVRYQPLLKNPIPDVASRAAAGEFY

Specific function: Required for bacteriophage N4 adsorption. May be a component of the phage receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786781, Length=490, Percent_Identity=36.9387755102041, Blast_Score=288, Evalue=4e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007831 [H]

Pfam domain/function: PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 52341; Mature: 52209

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVAVWILISGLDDLFITMVGFATSRVRFPWPSSGDLKSAAEQPIAIFVPLWHEHRVIGR
CCEEEEEEECCHHHHHHHHHHHHHCEEECCCCCCCCHHHHHCCCEEEEEECCHHHHHHHH
MLEHNLAAVRYGNYHVFAGVYPNDTPTLRAVELQAAVHPKIHTAICPHDGPTSKGDCLNW
HHHCCCEEEEECCEEEEEEECCCCCCCEEEEEEHHHHCCCEEEEECCCCCCCCCCHHHHH
IYQHMRAWEARHGTRFRVVVLHDAEDLIDPESLRLINWFSRDYEMVQVPVLPLATAVKEW
HHHHHHHHHHCCCCEEEEEEEECHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
THGLYCDEFAEYQRKDIPVRQQLGGFLPSNGVGTGFGRDALERLADGRNGRPFDPACLTE
HCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCC
DYETGYLLHELGCRQIFLPVRFRENGPTATREFFPRGARAAISQRTRWVTGIALQSWERH
CCCCCHHHHHCCCCEEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
GWRVPLSQLYWFWRDRKGLIGNLLSPAANLLFLYGAGSYAFSTGHPSAWHLGSHIPPWLA
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCC
GSCRLTLAIAALQTGVRARSAALIYGWKFAAGVPLRMVWGNLVNFAATAMALWEFGNSRR
CCHHHHHHHHHHHHCCHHHCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
RGGGLAWRKTDHMYPTALATSGVRYQPLLKNPIPDVASRAAAGEFY
CCCCCEEEECCCCCCHHHHCCCCEECCHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PVAVWILISGLDDLFITMVGFATSRVRFPWPSSGDLKSAAEQPIAIFVPLWHEHRVIGR
CEEEEEEECCHHHHHHHHHHHHHCEEECCCCCCCCHHHHHCCCEEEEEECCHHHHHHHH
MLEHNLAAVRYGNYHVFAGVYPNDTPTLRAVELQAAVHPKIHTAICPHDGPTSKGDCLNW
HHHCCCEEEEECCEEEEEEECCCCCCCEEEEEEHHHHCCCEEEEECCCCCCCCCCHHHHH
IYQHMRAWEARHGTRFRVVVLHDAEDLIDPESLRLINWFSRDYEMVQVPVLPLATAVKEW
HHHHHHHHHHCCCCEEEEEEEECHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
THGLYCDEFAEYQRKDIPVRQQLGGFLPSNGVGTGFGRDALERLADGRNGRPFDPACLTE
HCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCC
DYETGYLLHELGCRQIFLPVRFRENGPTATREFFPRGARAAISQRTRWVTGIALQSWERH
CCCCCHHHHHCCCCEEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
GWRVPLSQLYWFWRDRKGLIGNLLSPAANLLFLYGAGSYAFSTGHPSAWHLGSHIPPWLA
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCC
GSCRLTLAIAALQTGVRARSAALIYGWKFAAGVPLRMVWGNLVNFAATAMALWEFGNSRR
CCHHHHHHHHHHHHCCHHHCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
RGGGLAWRKTDHMYPTALATSGVRYQPLLKNPIPDVASRAAAGEFY
CCCCCEEEECCCCCCHHHHCCCCEECCHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]