| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624638
Identifier: 116624638
GI number: 116624638
Start: 6973428
End: 6974654
Strand: Reverse
Name: 116624638
Synonym: Acid_5562
Alternate gene names: NA
Gene position: 6974654-6973428 (Counterclockwise)
Preceding gene: 116624639
Following gene: 116624635
Centisome position: 69.99
GC content: 66.42
Gene sequence:
>1227_bases ATGCCGACTCGCCGGTTCTTTCTTCGTAACTCCGCGCTCGCCATGGTGGGCGTCGGCGCGGCGCCCCTGTGGCTGGAGCG CGCCTTGTATGCGGGCGACGCTCCCGGCGCTCGCAAGAAGATCCTGGTCGCGATTTTCCAACGCGGCGCGGCCGATGGCT TGAACGTAGTGGTGCCGCACGGCGATCCGGCCTATTACGACCTGCGGCCGACGATCGCGATTCCGCGGCCCACGAGCGAT CCCGCAAAGGCGGCGCAGGCCGCGATCGACCTCGACGGTTTCTTCGGACTGCATCCCTCGCTCGCGTCCCTCAAGCCCCT GTTCGAGCAGAAGCATCTGGCGATCGTGGACGCGGTGGGGTCGCCCGATCCGACGCGCTCGCATTTCGACGCGCAGGACT ACATGGAATCCGGTACGCCCGGGCTGAAAGCGACGCAGGACGGGTGGATGAATCGCGCCCTGCCGAAGGCGCAGGGCAAG GTGTCGCCCGTGCGCGCCGTGTCGCTGGGACCGGTACTGCCACGGGCGATGCGTGGGCCGGCGCCGGCCGTCGCGCTGCA GACCATCGACAGCTTCCAGGTGCGCAATGCGGAAGCCGCCAAACAGTTCGAGCAGATGTACACGCAGTCCAGCGACCGGA TGATCCAGGCCGCGGGGCGCGAGACCTTTGAGGCGGTGGCGATGCTGCAGGCAATCCAGCGCCAGCAGTACACCCCGGCG TCGGGCGCGGACTATCCGCGCGGGCGGCTGGGAGCCAGCCTGCAGCAGATCGCGCAGTTGATCAAGAGCGATGTCGGCGT TGAGATGGCGTTCGCCGATATCGGCGGATGGGACCATCACGTCAACGAAACCCCGCAGCTCGCGAACCTGCTGACGGAGT ACGGGCAGGCGCTGACCGCCTTCTGGAAGGACATGGGCGACCGCATGGACGACGTAGTCCTGGTGACCATGAGCGAGTTC GGCCGGACGGCGCACGAGAACGGCAACCGCGGCACCGATCACGGTCACGCCAACAGTATGTTTGTGATGGGCGGCGGAGT GAAGGGCGGCAAGGTCTACGGCAAGTGGCCGGGTCTGCAGAAAGAGCAGCTCTACGAAGGCCGCGACCTGGCCCTGACCA CGGATTTCCGCGACGTACTCGGCGAACTGGTCAGCGGACATCTGGGGAACCCGTCGGTGAAAAACGTATTCCCCGGCTAC GCGCCGAAGTTTCTGGGCCTGGTGTAA
Upstream 100 bases:
>100_bases AGGTGCCCGGCGTGAAAGTGGATGCCGGAAAACTGGCCAAGGCCGACGACCCGATCGCGGGTATCGCGCTGGGTTCCCCC GAGTTTCAAAAGAGGTAATT
Downstream 100 bases:
>100_bases GGCTCAATAGCCGAGTCGAAGCAGGCCCTCGGTTTTTCCCTGCACGGTTCCGCGCGTGAGGAAATCGAGCGACGCGCGGA AGAGCAGCAGGTGATTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPTRRFFLRNSALAMVGVGAAPLWLERALYAGDAPGARKKILVAIFQRGAADGLNVVVPHGDPAYYDLRPTIAIPRPTSD PAKAAQAAIDLDGFFGLHPSLASLKPLFEQKHLAIVDAVGSPDPTRSHFDAQDYMESGTPGLKATQDGWMNRALPKAQGK VSPVRAVSLGPVLPRAMRGPAPAVALQTIDSFQVRNAEAAKQFEQMYTQSSDRMIQAAGRETFEAVAMLQAIQRQQYTPA SGADYPRGRLGASLQQIAQLIKSDVGVEMAFADIGGWDHHVNETPQLANLLTEYGQALTAFWKDMGDRMDDVVLVTMSEF GRTAHENGNRGTDHGHANSMFVMGGGVKGGKVYGKWPGLQKEQLYEGRDLALTTDFRDVLGELVSGHLGNPSVKNVFPGY APKFLGLV
Sequences:
>Translated_408_residues MPTRRFFLRNSALAMVGVGAAPLWLERALYAGDAPGARKKILVAIFQRGAADGLNVVVPHGDPAYYDLRPTIAIPRPTSD PAKAAQAAIDLDGFFGLHPSLASLKPLFEQKHLAIVDAVGSPDPTRSHFDAQDYMESGTPGLKATQDGWMNRALPKAQGK VSPVRAVSLGPVLPRAMRGPAPAVALQTIDSFQVRNAEAAKQFEQMYTQSSDRMIQAAGRETFEAVAMLQAIQRQQYTPA SGADYPRGRLGASLQQIAQLIKSDVGVEMAFADIGGWDHHVNETPQLANLLTEYGQALTAFWKDMGDRMDDVVLVTMSEF GRTAHENGNRGTDHGHANSMFVMGGGVKGGKVYGKWPGLQKEQLYEGRDLALTTDFRDVLGELVSGHLGNPSVKNVFPGY APKFLGLV >Mature_407_residues PTRRFFLRNSALAMVGVGAAPLWLERALYAGDAPGARKKILVAIFQRGAADGLNVVVPHGDPAYYDLRPTIAIPRPTSDP AKAAQAAIDLDGFFGLHPSLASLKPLFEQKHLAIVDAVGSPDPTRSHFDAQDYMESGTPGLKATQDGWMNRALPKAQGKV SPVRAVSLGPVLPRAMRGPAPAVALQTIDSFQVRNAEAAKQFEQMYTQSSDRMIQAAGRETFEAVAMLQAIQRQQYTPAS GADYPRGRLGASLQQIAQLIKSDVGVEMAFADIGGWDHHVNETPQLANLLTEYGQALTAFWKDMGDRMDDVVLVTMSEFG RTAHENGNRGTDHGHANSMFVMGGGVKGGKVYGKWPGLQKEQLYEGRDLALTTDFRDVLGELVSGHLGNPSVKNVFPGYA PKFLGLV
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44051; Mature: 43919
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRRFFLRNSALAMVGVGAAPLWLERALYAGDAPGARKKILVAIFQRGAADGLNVVVPH CCCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC GDPAYYDLRPTIAIPRPTSDPAKAAQAAIDLDGFFGLHPSLASLKPLFEQKHLAIVDAVG CCCCEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCC SPDPTRSHFDAQDYMESGTPGLKATQDGWMNRALPKAQGKVSPVRAVSLGPVLPRAMRGP CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHCCC APAVALQTIDSFQVRNAEAAKQFEQMYTQSSDRMIQAAGRETFEAVAMLQAIQRQQYTPA CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGADYPRGRLGASLQQIAQLIKSDVGVEMAFADIGGWDHHVNETPQLANLLTEYGQALTA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH FWKDMGDRMDDVVLVTMSEFGRTAHENGNRGTDHGHANSMFVMGGGVKGGKVYGKWPGLQ HHHHHCCCCCCEEEEEHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCC KEQLYEGRDLALTTDFRDVLGELVSGHLGNPSVKNVFPGYAPKFLGLV HHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHCCC >Mature Secondary Structure PTRRFFLRNSALAMVGVGAAPLWLERALYAGDAPGARKKILVAIFQRGAADGLNVVVPH CCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC GDPAYYDLRPTIAIPRPTSDPAKAAQAAIDLDGFFGLHPSLASLKPLFEQKHLAIVDAVG CCCCEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCC SPDPTRSHFDAQDYMESGTPGLKATQDGWMNRALPKAQGKVSPVRAVSLGPVLPRAMRGP CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHCCC APAVALQTIDSFQVRNAEAAKQFEQMYTQSSDRMIQAAGRETFEAVAMLQAIQRQQYTPA CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGADYPRGRLGASLQQIAQLIKSDVGVEMAFADIGGWDHHVNETPQLANLLTEYGQALTA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH FWKDMGDRMDDVVLVTMSEFGRTAHENGNRGTDHGHANSMFVMGGGVKGGKVYGKWPGLQ HHHHHCCCCCCEEEEEHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCC KEQLYEGRDLALTTDFRDVLGELVSGHLGNPSVKNVFPGYAPKFLGLV HHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA