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The map label for this gene is 116624616

Identifier: 116624616

GI number: 116624616

Start: 6944237

End: 6944953

Strand: Direct

Name: 116624616

Synonym: Acid_5540

Alternate gene names: NA

Gene position: 6944237-6944953 (Clockwise)

Preceding gene: 116624615

Following gene: 116624617

Centisome position: 69.68

GC content: 59.83

Gene sequence:

>717_bases
ATGAGCTGTGAAAACGTGCAAGAACGGATCTCCCTCCTGCTGGATTGCAAGCTTCCAGACAGTGACCGGGAGCATGTGTT
GGCGCACATCAATACGTGCCGCCAATGTGGGTCCCGTTTTGAATCGATGCAGTATATGCGAGCGAGCCTGCGCAATATGG
CCCGGCCCAAAGTGCCGCCCGCCCTCGCCGCCCAACTGCGTGTGATGGCGTCGCACGAGTGCGCCCGCCAGGTGGCCCGC
AAGAATTTCGCGACCCGCGTGGAACACTGGGTTTCTTTAGTGCGCCTTGCGTTCGACAACATGATGCGCCCCTTCGCCGT
GCCGTTCACCGGCGGATTGCTTTCGGCGCTCGTTATCTTCAGCGTTCTCGTACCCAGCTTGAGCTTCCCGCACAGCTACA
GCGACGATCCGCCCGTGGCGGGCCTTACCTCGGATATGCAGTTTGGCGATCCCGACGCCATCTGGCTTGGCACCAGCAAT
ACTCACGCATGGCTGGAACCGGCCAGCGCGCTGATCTATGACAACCAGGTGAGCCTGACACTGGTGATCGACGAACGCGG
CCGCGTCCACGATTACTATCTTTCCGGCGGCGAGTTGACTCCCGAAATGAAGAGCATGATTGTGCTTTCCCAATTCAAGC
CGGCTACCGTGAACGGCCAACCCGTCTGGGGTCTCAAACAAGTGGTCTTCACTCGCGGCCAACGTCTGCGGAGCTAG

Upstream 100 bases:

>100_bases
CGTATCCTGCGAGGCCGGGAAGCCTTGCGGGAAGAGCTCGCGGGAAGCCTGAATGCAGGCCCGGCCCCGCGTTTAGTGCC
CACGACGGCAGAGTGATGCT

Downstream 100 bases:

>100_bases
CGGCTCAGCGTGCCGCAAAAACTCGGGCAGCACTTCCTCTCCAACGGTTCGGTACTCGATCGCATTGCCTTGGCGGTGTG
TCCGGAGGGGGAAGAACTCG

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Anti-Sigma Factor

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSCENVQERISLLLDCKLPDSDREHVLAHINTCRQCGSRFESMQYMRASLRNMARPKVPPALAAQLRVMASHECARQVAR
KNFATRVEHWVSLVRLAFDNMMRPFAVPFTGGLLSALVIFSVLVPSLSFPHSYSDDPPVAGLTSDMQFGDPDAIWLGTSN
THAWLEPASALIYDNQVSLTLVIDERGRVHDYYLSGGELTPEMKSMIVLSQFKPATVNGQPVWGLKQVVFTRGQRLRS

Sequences:

>Translated_238_residues
MSCENVQERISLLLDCKLPDSDREHVLAHINTCRQCGSRFESMQYMRASLRNMARPKVPPALAAQLRVMASHECARQVAR
KNFATRVEHWVSLVRLAFDNMMRPFAVPFTGGLLSALVIFSVLVPSLSFPHSYSDDPPVAGLTSDMQFGDPDAIWLGTSN
THAWLEPASALIYDNQVSLTLVIDERGRVHDYYLSGGELTPEMKSMIVLSQFKPATVNGQPVWGLKQVVFTRGQRLRS
>Mature_237_residues
SCENVQERISLLLDCKLPDSDREHVLAHINTCRQCGSRFESMQYMRASLRNMARPKVPPALAAQLRVMASHECARQVARK
NFATRVEHWVSLVRLAFDNMMRPFAVPFTGGLLSALVIFSVLVPSLSFPHSYSDDPPVAGLTSDMQFGDPDAIWLGTSNT
HAWLEPASALIYDNQVSLTLVIDERGRVHDYYLSGGELTPEMKSMIVLSQFKPATVNGQPVWGLKQVVFTRGQRLRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26648; Mature: 26517

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCENVQERISLLLDCKLPDSDREHVLAHINTCRQCGSRFESMQYMRASLRNMARPKVPP
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ALAAQLRVMASHECARQVARKNFATRVEHWVSLVRLAFDNMMRPFAVPFTGGLLSALVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SVLVPSLSFPHSYSDDPPVAGLTSDMQFGDPDAIWLGTSNTHAWLEPASALIYDNQVSLT
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCHHEEECCCEEEE
LVIDERGRVHDYYLSGGELTPEMKSMIVLSQFKPATVNGQPVWGLKQVVFTRGQRLRS
EEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SCENVQERISLLLDCKLPDSDREHVLAHINTCRQCGSRFESMQYMRASLRNMARPKVPP
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ALAAQLRVMASHECARQVARKNFATRVEHWVSLVRLAFDNMMRPFAVPFTGGLLSALVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SVLVPSLSFPHSYSDDPPVAGLTSDMQFGDPDAIWLGTSNTHAWLEPASALIYDNQVSLT
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCHHEEECCCEEEE
LVIDERGRVHDYYLSGGELTPEMKSMIVLSQFKPATVNGQPVWGLKQVVFTRGQRLRS
EEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA