| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624591
Identifier: 116624591
GI number: 116624591
Start: 6914906
End: 6915349
Strand: Direct
Name: 116624591
Synonym: Acid_5515
Alternate gene names: NA
Gene position: 6914906-6915349 (Clockwise)
Preceding gene: 116624590
Following gene: 116624594
Centisome position: 69.39
GC content: 55.63
Gene sequence:
>444_bases ATGAGTATTGCCCTCCTCGATGTGAACGTTCTGATCGCGCTGTTCGATCCTGCCCATATCGACCACGTCGAGGCGCACCG CTGGTTCGGCCTAAATCGCAAGCGCGGATGGGCAACATGCCCAATTACTATCAATGGCTGCGTTCGCATACTAAGCAGTC CCGGCTATCCAGGCATAAACGCAAGCCCGGCCGAAATAACCGCTCGCATGCAAGCGTCCTTCGCTAACGTCGATCATCAT TTCTGGCCGGACTCGGTATCGTTGCTCGATGAGGCCCTGTTTCGCCCATCGATGATAACCGGACACAAGAACATCACCGA TGTATACTTGCTGGGCTTGGCCGTCCGGAATCATGGCAGGCTCGCCACATTCGACCAGTCCATCCCATTGAAGGCCGTTC ACGGCGCCGCTCCAGGAAATCTGGTCGTGATCGGGAATAAGTAA
Upstream 100 bases:
>100_bases CGGCCCCGATGAAAGTGCGCAATGGAATATTGCTCCTCACGCCCAAGCCGGGCGCTCCGAGACCGGACATGGAGTTGGTG AATCGACTGCGGGACGAGGA
Downstream 100 bases:
>100_bases CCCTGGTGAACGCAACTCGCCGGAGTCAAGTGAAGCGTGGGTTCTACGGCAGCCAGTATTCCGTGCCCGGTTCCGTGATC GCCGCCATTATTTTCGGTTT
Product: PilT domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSIALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGINASPAEITARMQASFANVDHH FWPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGRLATFDQSIPLKAVHGAAPGNLVVIGNK
Sequences:
>Translated_147_residues MSIALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGINASPAEITARMQASFANVDHH FWPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGRLATFDQSIPLKAVHGAAPGNLVVIGNK >Mature_146_residues SIALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGINASPAEITARMQASFANVDHHF WPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGRLATFDQSIPLKAVHGAAPGNLVVIGNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16012; Mature: 15880
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGIN CEEEEEEEEEEEEEECCCCCCCCCHHHEECCCCCCCEEEEEEEHHHHHHHHCCCCCCCCC ASPAEITARMQASFANVDHHFWPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGR CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHEEEEEEEECCCCC LATFDQSIPLKAVHGAAPGNLVVIGNK EEEECCCCCEEEECCCCCCCEEEEECC >Mature Secondary Structure SIALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGIN EEEEEEEEEEEEEECCCCCCCCCHHHEECCCCCCCEEEEEEEHHHHHHHHCCCCCCCCC ASPAEITARMQASFANVDHHFWPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGR CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHEEEEEEEECCCCC LATFDQSIPLKAVHGAAPGNLVVIGNK EEEECCCCCEEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA