| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624586
Identifier: 116624586
GI number: 116624586
Start: 6909587
End: 6911725
Strand: Reverse
Name: 116624586
Synonym: Acid_5510
Alternate gene names: NA
Gene position: 6911725-6909587 (Counterclockwise)
Preceding gene: 116624592
Following gene: 116624585
Centisome position: 69.36
GC content: 60.96
Gene sequence:
>2139_bases ATGCGCCCCGGTTCCATCGTGATGTTGGGTATTGGTGTATGCCTGGTGCCTCTTCACGCGCAGGATTGTGCCGCGGTAGC GCGCATTCTACCGGCAGGCACGGTTTCGGGAACGCTGGCGGACGGTCAGTGCCAGCTGTCGGATGGCACGCCTTATCTTC CGTTTCGTCTGGACCTGCCGGTGCGCGGGAAGATTAAGATCGCGTTAACGGGGAGTTCCAGCGGGAGCCCCAGCGATCTT GGATTGATTCTGCGCGACGCCGCGGGGACCCGAATTGATTCGGGAACTGCGATCGCGCGACCGATCGAGGCGGGCAGCTA CACGGTGCTTCTGAACGGAAGCAAGCCGGGGCAAACCGGCGATTACAACATCACGACCGCATTCACGGCGGAATCCGGGA TGCTGTGCGGCAATTTCCCGAATCTGGGACGTCGCCAAGTGGCTCGCGGGATGCTGCCGGGATCGAACTGCCAGGCGCCC GATGGCACCCCATACGAAGCCTACACGCTGACAACAGACGGCGCTGGCACGCTCACGGTGACGGTGGACAGCACGGACTT CACACCGGTGATCGCGGTGCGTTCGAGCGATGGTCACGTGATCGCGATGCCGGCGGCCAGTCCGGTGAATGTACTGGTGA ATGGCGACAGCCAGTACCTGGTGGTGATCAGCTCCGGCGACAAATCAGGGACGTACACGATTACGACCAGCTTCCAGGCG GGCGACACCGAGACCTGCCGCTCCAAGAAGACATTTACGGGGCCGGATTCGGACACGAATACGATCGGCGCCGATAGTTG TTTCTTGACGATTGCGGGCAGCGGCGATCAATCGTACTACAACTATTACAATGTGACGGTCGGCTCCAGCGGACTGGTAA GAGCGACGGTGACGAGTGGGGATTTCAACGCCACGGTCAACCTGCTGGACGCCGATGGATATCTGCTGGCATCCGACGCA GGCAGCGGCGGTTTCGACGCGCAGTTCAACTCAATATCCGGTTTGCGGGCGCAGTTACCGGCGGGCAACTACCGGCTCCA GGTATTCAGCGATGTGCCTTCGGGCGGCGCGTACTCTTTACAGTATTCGTTCACCGCGGGCAATCCGAAGCCGTGCACCC CGGCCACGTTGAATTTCGGTGATCTGCCGGCCGGCACACTCAACGCGGACAGCTGCCGCAGCAGTTATGGAATCGCGGAC ATTTATACCGTAGCGGTGCCGGGTTGGGGGACGGTGGATTTCGACATGAGCACTGCGTCCTTCAATACTTCGCTGGTGAT CCGCGATGCCAAAGACAATCTGATCGTGCGCAATGACGAAGTGGACGGCGTCAGCGATTCGCACATCACGGCCGATCTGC CGGCGGGCACTTACACGATTGTGGCGGCGGCTTCTTCCGGGTCGGGGAACTACCGGCTGGCGGTGAAGTTCACGCCCCAC GATGCGCTGCCCTGCACGTATGTGCAGGCGCTGGACCTGAACGGAGGGTTCATCCAAAGGCTGGGCCGCGGGAGTTGCCG CGCGTCCAACGGGCAGCCAGTGGATTACTACAGTTTCACGCTGGCGGCGGATTCCCTGGTGCTGGCGGTGATGACGTCGA GCGAAGTGGATGGTTTTTTGACGCTGACCGATGCGGCCGGGAATGTGCTGCGCACGGACGACAACAGTTACGGATCGAAT GATCCGCTGATTGTGCAGTATCTGCCGGCGGGGAGCTATCAACTGGCGGCGCGCGATTCCTCGAGCACAGCCGGCGGCTT GTATGAAATAGACTTGCGGACCACCGAGGGTGCGCGTCCGCCGTTCTGCATGCCCAAGGCGACGATGGCCCAGGGAGCGA CGGCCACCGGTGAGATCCGGTATACGGGCTGCCAGTACGGCGACAACACATTCGCCGATTTGTACCAGCTAACCCTGACC GCAGATGGGCAGGTGGACATCCGGCTGGATTCGAGCGATTTTGACGCTTACCTGATTCTCTTGGATGCCAAGGGCGCGGA AATGGATGAAGACGACGATAGCGGCGGCAACACGAATGCGCGGTTGACCCGTGCGCTGGCGGCGGGCACATACACGATCG TGGTCAAACCTTTCGGCGATTACCGGGATCAGGGCAAGTACACGTTGAGTGTCAAATAG
Upstream 100 bases:
>100_bases CGATTTCAGGTTTGGCGGTGTGTTTTCCACAAGTTGTTGATAACGCCACCTGGCGGCGATTTACCGTAACATTTTCTGCC GCGATGCGTTAATACATGTA
Downstream 100 bases:
>100_bases GGCGGTACGGTACGGGGAAATCCCCGATATCCAGGGAAGGGCTTGGGCGCGGTGACGCACGCTATACTGCAGATAGTCCG GTCCGCGTCCTAACGGCCCG
Product: peptidase domain-containing protein
Products: NA
Alternate protein names: Peptidase Domain-Containing Protein
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MRPGSIVMLGIGVCLVPLHAQDCAAVARILPAGTVSGTLADGQCQLSDGTPYLPFRLDLPVRGKIKIALTGSSSGSPSDL GLILRDAAGTRIDSGTAIARPIEAGSYTVLLNGSKPGQTGDYNITTAFTAESGMLCGNFPNLGRRQVARGMLPGSNCQAP DGTPYEAYTLTTDGAGTLTVTVDSTDFTPVIAVRSSDGHVIAMPAASPVNVLVNGDSQYLVVISSGDKSGTYTITTSFQA GDTETCRSKKTFTGPDSDTNTIGADSCFLTIAGSGDQSYYNYYNVTVGSSGLVRATVTSGDFNATVNLLDADGYLLASDA GSGGFDAQFNSISGLRAQLPAGNYRLQVFSDVPSGGAYSLQYSFTAGNPKPCTPATLNFGDLPAGTLNADSCRSSYGIAD IYTVAVPGWGTVDFDMSTASFNTSLVIRDAKDNLIVRNDEVDGVSDSHITADLPAGTYTIVAAASSGSGNYRLAVKFTPH DALPCTYVQALDLNGGFIQRLGRGSCRASNGQPVDYYSFTLAADSLVLAVMTSSEVDGFLTLTDAAGNVLRTDDNSYGSN DPLIVQYLPAGSYQLAARDSSSTAGGLYEIDLRTTEGARPPFCMPKATMAQGATATGEIRYTGCQYGDNTFADLYQLTLT ADGQVDIRLDSSDFDAYLILLDAKGAEMDEDDDSGGNTNARLTRALAAGTYTIVVKPFGDYRDQGKYTLSVK
Sequences:
>Translated_712_residues MRPGSIVMLGIGVCLVPLHAQDCAAVARILPAGTVSGTLADGQCQLSDGTPYLPFRLDLPVRGKIKIALTGSSSGSPSDL GLILRDAAGTRIDSGTAIARPIEAGSYTVLLNGSKPGQTGDYNITTAFTAESGMLCGNFPNLGRRQVARGMLPGSNCQAP DGTPYEAYTLTTDGAGTLTVTVDSTDFTPVIAVRSSDGHVIAMPAASPVNVLVNGDSQYLVVISSGDKSGTYTITTSFQA GDTETCRSKKTFTGPDSDTNTIGADSCFLTIAGSGDQSYYNYYNVTVGSSGLVRATVTSGDFNATVNLLDADGYLLASDA GSGGFDAQFNSISGLRAQLPAGNYRLQVFSDVPSGGAYSLQYSFTAGNPKPCTPATLNFGDLPAGTLNADSCRSSYGIAD IYTVAVPGWGTVDFDMSTASFNTSLVIRDAKDNLIVRNDEVDGVSDSHITADLPAGTYTIVAAASSGSGNYRLAVKFTPH DALPCTYVQALDLNGGFIQRLGRGSCRASNGQPVDYYSFTLAADSLVLAVMTSSEVDGFLTLTDAAGNVLRTDDNSYGSN DPLIVQYLPAGSYQLAARDSSSTAGGLYEIDLRTTEGARPPFCMPKATMAQGATATGEIRYTGCQYGDNTFADLYQLTLT ADGQVDIRLDSSDFDAYLILLDAKGAEMDEDDDSGGNTNARLTRALAAGTYTIVVKPFGDYRDQGKYTLSVK >Mature_712_residues MRPGSIVMLGIGVCLVPLHAQDCAAVARILPAGTVSGTLADGQCQLSDGTPYLPFRLDLPVRGKIKIALTGSSSGSPSDL GLILRDAAGTRIDSGTAIARPIEAGSYTVLLNGSKPGQTGDYNITTAFTAESGMLCGNFPNLGRRQVARGMLPGSNCQAP DGTPYEAYTLTTDGAGTLTVTVDSTDFTPVIAVRSSDGHVIAMPAASPVNVLVNGDSQYLVVISSGDKSGTYTITTSFQA GDTETCRSKKTFTGPDSDTNTIGADSCFLTIAGSGDQSYYNYYNVTVGSSGLVRATVTSGDFNATVNLLDADGYLLASDA GSGGFDAQFNSISGLRAQLPAGNYRLQVFSDVPSGGAYSLQYSFTAGNPKPCTPATLNFGDLPAGTLNADSCRSSYGIAD IYTVAVPGWGTVDFDMSTASFNTSLVIRDAKDNLIVRNDEVDGVSDSHITADLPAGTYTIVAAASSGSGNYRLAVKFTPH DALPCTYVQALDLNGGFIQRLGRGSCRASNGQPVDYYSFTLAADSLVLAVMTSSEVDGFLTLTDAAGNVLRTDDNSYGSN DPLIVQYLPAGSYQLAARDSSSTAGGLYEIDLRTTEGARPPFCMPKATMAQGATATGEIRYTGCQYGDNTFADLYQLTLT ADGQVDIRLDSSDFDAYLILLDAKGAEMDEDDDSGGNTNARLTRALAAGTYTIVVKPFGDYRDQGKYTLSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74269; Mature: 74269
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGSIVMLGIGVCLVPLHAQDCAAVARILPAGTVSGTLADGQCQLSDGTPYLPFRLDLP CCCCCEEEEECCEEEEEECCHHHHHHHHHCCCCCCCCEEECCEEEECCCCCCCEEEECCC VRGKIKIALTGSSSGSPSDLGLILRDAAGTRIDSGTAIARPIEAGSYTVLLNGSKPGQTG CCCEEEEEEECCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCC DYNITTAFTAESGMLCGNFPNLGRRQVARGMLPGSNCQAPDGTPYEAYTLTTDGAGTLTV CEEEEEEEEECCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE TVDSTDFTPVIAVRSSDGHVIAMPAASPVNVLVNGDSQYLVVISSGDKSGTYTITTSFQA EECCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECC GDTETCRSKKTFTGPDSDTNTIGADSCFLTIAGSGDQSYYNYYNVTVGSSGLVRATVTSG CCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEECC DFNATVNLLDADGYLLASDAGSGGFDAQFNSISGLRAQLPAGNYRLQVFSDVPSGGAYSL CCEEEEEEEECCCEEEEECCCCCCCCCEECCCCCEEEECCCCCEEEEEEECCCCCCEEEE QYSFTAGNPKPCTPATLNFGDLPAGTLNADSCRSSYGIADIYTVAVPGWGTVDFDMSTAS EEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCEEEEEEEECC FNTSLVIRDAKDNLIVRNDEVDGVSDSHITADLPAGTYTIVAAASSGSGNYRLAVKFTPH CCEEEEEEECCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEEEEEECCC DALPCTYVQALDLNGGFIQRLGRGSCRASNGQPVDYYSFTLAADSLVLAVMTSSEVDGFL CCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCEEE TLTDAAGNVLRTDDNSYGSNDPLIVQYLPAGSYQLAARDSSSTAGGLYEIDLRTTEGARP EEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCC PFCMPKATMAQGATATGEIRYTGCQYGDNTFADLYQLTLTADGQVDIRLDSSDFDAYLIL CCCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEE LDAKGAEMDEDDDSGGNTNARLTRALAAGTYTIVVKPFGDYRDQGKYTLSVK EECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MRPGSIVMLGIGVCLVPLHAQDCAAVARILPAGTVSGTLADGQCQLSDGTPYLPFRLDLP CCCCCEEEEECCEEEEEECCHHHHHHHHHCCCCCCCCEEECCEEEECCCCCCCEEEECCC VRGKIKIALTGSSSGSPSDLGLILRDAAGTRIDSGTAIARPIEAGSYTVLLNGSKPGQTG CCCEEEEEEECCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCC DYNITTAFTAESGMLCGNFPNLGRRQVARGMLPGSNCQAPDGTPYEAYTLTTDGAGTLTV CEEEEEEEEECCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE TVDSTDFTPVIAVRSSDGHVIAMPAASPVNVLVNGDSQYLVVISSGDKSGTYTITTSFQA EECCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECC GDTETCRSKKTFTGPDSDTNTIGADSCFLTIAGSGDQSYYNYYNVTVGSSGLVRATVTSG CCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEECC DFNATVNLLDADGYLLASDAGSGGFDAQFNSISGLRAQLPAGNYRLQVFSDVPSGGAYSL CCEEEEEEEECCCEEEEECCCCCCCCCEECCCCCEEEECCCCCEEEEEEECCCCCCEEEE QYSFTAGNPKPCTPATLNFGDLPAGTLNADSCRSSYGIADIYTVAVPGWGTVDFDMSTAS EEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCEEEEEEEECC FNTSLVIRDAKDNLIVRNDEVDGVSDSHITADLPAGTYTIVAAASSGSGNYRLAVKFTPH CCEEEEEEECCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEEEEEECCC DALPCTYVQALDLNGGFIQRLGRGSCRASNGQPVDYYSFTLAADSLVLAVMTSSEVDGFL CCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCEEE TLTDAAGNVLRTDDNSYGSNDPLIVQYLPAGSYQLAARDSSSTAGGLYEIDLRTTEGARP EEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCC PFCMPKATMAQGATATGEIRYTGCQYGDNTFADLYQLTLTADGQVDIRLDSSDFDAYLIL CCCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEE LDAKGAEMDEDDDSGGNTNARLTRALAAGTYTIVVKPFGDYRDQGKYTLSVK EECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA