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The map label for this gene is noeA [H]

Identifier: 116624464

GI number: 116624464

Start: 6748023

End: 6749492

Strand: Direct

Name: noeA [H]

Synonym: Acid_5386

Alternate gene names: 116624464

Gene position: 6748023-6749492 (Clockwise)

Preceding gene: 116624463

Following gene: 116624465

Centisome position: 67.71

GC content: 63.47

Gene sequence:

>1470_bases
ATGGAAACCACCGCTCAATCCTCCATTCGGGATTTGGGGGCTTCGTTTCGCGATCCGGGTGGCGCCGTCTTCCTCTGGGA
CGACCGGGTCTTCCGGGCCGTGAATGCTCTCGGCGAGGAAGATCTCTCCGCCTTCCTCGACGCGCAGTCATCCCGGCAGG
CCATAGACCGCGGTCAGGTGATCGCCACCCGCCGGACCTCCGCCGAGGAAGCCCAGGCCCTTCTCGGCAACCCCGAGGTC
CGCTCCGTCTTCGATAGCGTTGCGGCAACCGCGCTCCTCGAACACGAGCGCATCGCCTTTCCCACCTTCCCTTACGAGTG
GATACCGGAAATGCTGCATGCCGCCGCCGGTCTCACGCTCGACCTGGCGGAATCCCTGCTCGCCGATGGAATCGGACTAA
AGGACGCCACACCGTATAACATTCTCTTCCGCGGCCCGGCACCCATCTTCATTGATGTCCTCTCCTTTGAACGTCGGCGT
CCCGGCGATCCGACCTGGCTTCCCTACGCCCAGTTCGCCCGCACCTTCCTTCTGCCTTTGCTGGCGCACAAACGCTTCGG
GATCGGCCTGGACCAGATCCTCACCACCCGGCGCGACGGCCTCGAACCGGAGGAGGTATACCGCTGGGCCGGACCGCTTC
AGCGCCTGACACCGACTTTCCTCTCCCTGGTTTCCCTACCGACCTGGCTCGGAGGCAAGCAGAAGCGCGCACCCGACGCC
AACCTCTATACCAGGAAGACCGTCGATGATTCCGCCAAAGCCGAGTTCATTCTGCGCTCCTTGTTGGGCGGAGCGCGGCG
CACGCTCGCGAAACTCGCGCCCACGGCCGGCGCCAACTCGGCCTGGTCGGATTACATGGATTCGAACCTCAACTATTCGG
CCGATCACTTCGCGGCCAAGCAGAGCTTCGTCTCCGCGGCACTCGCCGAGTTCGCTCCCAAACGGGTGCTCGACGTAGGC
TGCAATACCGGCCATTTCAGCGCGATCGCAGCCCGCGCCGGAGCGGCGGTAGTCTCCATCGATTACGATCCCGTGGTCCT
GGGCCAGGTTTGGCGCCAGGCGCGCGCCGAATCGCTCGACATTCTCCCGCTGGCCGTCAATCTTGCGCGGCCCACGCCAA
GTACCGGCTGGCGCAATCGGGAATGCCCGTCCTTTCTCGAACGGGCGCGCGGCGGCTTCGACGCCGTGTTGATGCTTGCC
GTCATCCATCACATGCTGGTGACCGAGCGCGTGCCCTTGAATGACATCCTCAAGCTCGCTGCCGAGTTGACCAGAGACAT
CCTGATCGTCGAATTCGTGTCGCCCGAGGATGCGATGTTCCAGCGAATAGTACGCGGGCGCGAAGAACTCCACCAGGGCC
TCACCAACACCGTGTTCGAGGCCGCCTGCCGTCAATACTTCGAAATTCTGCGCGTTCAACATCTGGAAGGAGCCACGCGC
TGGCTGTACCTGTTACGAAAGAGCCGCTGA

Upstream 100 bases:

>100_bases
CGTTCAGGCGTTGTTCGCAGCTCTGGCGGGAGTCCTGTTTCAATTCCGTCGCATCAGAATGTGGTTGAAGAGCCGTGGCG
GCCCCAAGGGCTAGCCGTTA

Downstream 100 bases:

>100_bases
CCCATGGCACTGGAACATGTCGATACTCGGGAAGCCGCATCGCCGTCCCAACCCGGCAAGCAGGTAGCCGCCGGCCGCAC
GCGGCACGATCTCGCGATTG

Product: type 12 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
METTAQSSIRDLGASFRDPGGAVFLWDDRVFRAVNALGEEDLSAFLDAQSSRQAIDRGQVIATRRTSAEEAQALLGNPEV
RSVFDSVAATALLEHERIAFPTFPYEWIPEMLHAAAGLTLDLAESLLADGIGLKDATPYNILFRGPAPIFIDVLSFERRR
PGDPTWLPYAQFARTFLLPLLAHKRFGIGLDQILTTRRDGLEPEEVYRWAGPLQRLTPTFLSLVSLPTWLGGKQKRAPDA
NLYTRKTVDDSAKAEFILRSLLGGARRTLAKLAPTAGANSAWSDYMDSNLNYSADHFAAKQSFVSAALAEFAPKRVLDVG
CNTGHFSAIAARAGAAVVSIDYDPVVLGQVWRQARAESLDILPLAVNLARPTPSTGWRNRECPSFLERARGGFDAVLMLA
VIHHMLVTERVPLNDILKLAAELTRDILIVEFVSPEDAMFQRIVRGREELHQGLTNTVFEAACRQYFEILRVQHLEGATR
WLYLLRKSR

Sequences:

>Translated_489_residues
METTAQSSIRDLGASFRDPGGAVFLWDDRVFRAVNALGEEDLSAFLDAQSSRQAIDRGQVIATRRTSAEEAQALLGNPEV
RSVFDSVAATALLEHERIAFPTFPYEWIPEMLHAAAGLTLDLAESLLADGIGLKDATPYNILFRGPAPIFIDVLSFERRR
PGDPTWLPYAQFARTFLLPLLAHKRFGIGLDQILTTRRDGLEPEEVYRWAGPLQRLTPTFLSLVSLPTWLGGKQKRAPDA
NLYTRKTVDDSAKAEFILRSLLGGARRTLAKLAPTAGANSAWSDYMDSNLNYSADHFAAKQSFVSAALAEFAPKRVLDVG
CNTGHFSAIAARAGAAVVSIDYDPVVLGQVWRQARAESLDILPLAVNLARPTPSTGWRNRECPSFLERARGGFDAVLMLA
VIHHMLVTERVPLNDILKLAAELTRDILIVEFVSPEDAMFQRIVRGREELHQGLTNTVFEAACRQYFEILRVQHLEGATR
WLYLLRKSR
>Mature_489_residues
METTAQSSIRDLGASFRDPGGAVFLWDDRVFRAVNALGEEDLSAFLDAQSSRQAIDRGQVIATRRTSAEEAQALLGNPEV
RSVFDSVAATALLEHERIAFPTFPYEWIPEMLHAAAGLTLDLAESLLADGIGLKDATPYNILFRGPAPIFIDVLSFERRR
PGDPTWLPYAQFARTFLLPLLAHKRFGIGLDQILTTRRDGLEPEEVYRWAGPLQRLTPTFLSLVSLPTWLGGKQKRAPDA
NLYTRKTVDDSAKAEFILRSLLGGARRTLAKLAPTAGANSAWSDYMDSNLNYSADHFAAKQSFVSAALAEFAPKRVLDVG
CNTGHFSAIAARAGAAVVSIDYDPVVLGQVWRQARAESLDILPLAVNLARPTPSTGWRNRECPSFLERARGGFDAVLMLA
VIHHMLVTERVPLNDILKLAAELTRDILIVEFVSPEDAMFQRIVRGREELHQGLTNTVFEAACRQYFEILRVQHLEGATR
WLYLLRKSR

Specific function: Not known; does not seem to participate in nod factor synthesis but required for nodulation on some specific Medicago species such as M.littoralis [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002877 [H]

Pfam domain/function: PF01728 FtsJ [H]

EC number: NA

Molecular weight: Translated: 54270; Mature: 54270

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTAQSSIRDLGASFRDPGGAVFLWDDRVFRAVNALGEEDLSAFLDAQSSRQAIDRGQV
CCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCHHHHHHHHCCHHHHHHHHCCCE
IATRRTSAEEAQALLGNPEVRSVFDSVAATALLEHERIAFPTFPYEWIPEMLHAAAGLTL
EEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHH
DLAESLLADGIGLKDATPYNILFRGPAPIFIDVLSFERRRPGDPTWLPYAQFARTFLLPL
HHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LAHKRFGIGLDQILTTRRDGLEPEEVYRWAGPLQRLTPTFLSLVSLPTWLGGKQKRAPDA
HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NLYTRKTVDDSAKAEFILRSLLGGARRTLAKLAPTAGANSAWSDYMDSNLNYSADHFAAK
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHH
QSFVSAALAEFAPKRVLDVGCNTGHFSAIAARAGAAVVSIDYDPVVLGQVWRQARAESLD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCC
ILPLAVNLARPTPSTGWRNRECPSFLERARGGFDAVLMLAVIHHMLVTERVPLNDILKLA
EEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AELTRDILIVEFVSPEDAMFQRIVRGREELHQGLTNTVFEAACRQYFEILRVQHLEGATR
HHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
WLYLLRKSR
HHHHHHHCC
>Mature Secondary Structure
METTAQSSIRDLGASFRDPGGAVFLWDDRVFRAVNALGEEDLSAFLDAQSSRQAIDRGQV
CCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCHHHHHHHHCCHHHHHHHHCCCE
IATRRTSAEEAQALLGNPEVRSVFDSVAATALLEHERIAFPTFPYEWIPEMLHAAAGLTL
EEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHH
DLAESLLADGIGLKDATPYNILFRGPAPIFIDVLSFERRRPGDPTWLPYAQFARTFLLPL
HHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LAHKRFGIGLDQILTTRRDGLEPEEVYRWAGPLQRLTPTFLSLVSLPTWLGGKQKRAPDA
HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NLYTRKTVDDSAKAEFILRSLLGGARRTLAKLAPTAGANSAWSDYMDSNLNYSADHFAAK
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHH
QSFVSAALAEFAPKRVLDVGCNTGHFSAIAARAGAAVVSIDYDPVVLGQVWRQARAESLD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCC
ILPLAVNLARPTPSTGWRNRECPSFLERARGGFDAVLMLAVIHHMLVTERVPLNDILKLA
EEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AELTRDILIVEFVSPEDAMFQRIVRGREELHQGLTNTVFEAACRQYFEILRVQHLEGATR
HHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
WLYLLRKSR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8801423; 11481432 [H]