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The map label for this gene is cheD

Identifier: 116624449

GI number: 116624449

Start: 6732058

End: 6732567

Strand: Direct

Name: cheD

Synonym: Acid_5371

Alternate gene names: 116624449

Gene position: 6732058-6732567 (Clockwise)

Preceding gene: 116624448

Following gene: 116624450

Centisome position: 67.55

GC content: 62.55

Gene sequence:

>510_bases
ATGGAGCAAATCATCGTAGGCGTTGCCGATTGTCGCGTCGGCCACGCGCCGGAACAGGTGCTGGCCACCTACGCCCTGGG
CAGTTGTATCGGTCTTTCGATCTACGACCCTAAGGCTGCGATCGGCGGCATGCTCCACTATATGCTGCCCGACTCCACCA
TCGACCCCGCCCGCGGCCGCGAAAATCCCTATATGTTCGCCGACACCGGAATTCCCAAGCTGGTCGAACAGGTCTGCGGG
CGCGGCGCCAATCGCCGCCGCCTGATCGCCCACGCTGCGGGCGGGGCCAGCATGATGGATCCTCAAGCCGTGTTCGACAT
CGGCAAGCGCAACTACCTGGCCCTCCGAAAAATCCTCTGGAAGGCCGGCATCCTGCTGGCGGGGGAAGCAGTCGGTGGCA
CCAACTCCCGGACCGTCCGCCTGGAAATCGGCTCTGGCCGTCTCTGGCTGCAGGAAAACGGCAAGCAGAAGGAACTTGTC
CCTTCATTCCCCCAGAAAGGTGGAAACTAA

Upstream 100 bases:

>100_bases
GTTATCTCTTCGTCGGCCATGCCGAAAGTCTTGCGCGGGTCTCACATTCGCTCGAGTACGTCAAACCAGCCGTGTACCGA
AAACCGGACAGGGAGGGCAA

Downstream 100 bases:

>100_bases
TGGCCTATCGGGTGCTGATCACCGACGATTCCCCCGCGATGCGATCCTTTGTGCGCCGCGTTATCGAACTCTCCGGCTTT
GAATTGTCGCATTGCTACGA

Product: CheD, stimulates methylation of MCP proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MEQIIVGVADCRVGHAPEQVLATYALGSCIGLSIYDPKAAIGGMLHYMLPDSTIDPARGRENPYMFADTGIPKLVEQVCG
RGANRRRLIAHAAGGASMMDPQAVFDIGKRNYLALRKILWKAGILLAGEAVGGTNSRTVRLEIGSGRLWLQENGKQKELV
PSFPQKGGN

Sequences:

>Translated_169_residues
MEQIIVGVADCRVGHAPEQVLATYALGSCIGLSIYDPKAAIGGMLHYMLPDSTIDPARGRENPYMFADTGIPKLVEQVCG
RGANRRRLIAHAAGGASMMDPQAVFDIGKRNYLALRKILWKAGILLAGEAVGGTNSRTVRLEIGSGRLWLQENGKQKELV
PSFPQKGGN
>Mature_169_residues
MEQIIVGVADCRVGHAPEQVLATYALGSCIGLSIYDPKAAIGGMLHYMLPDSTIDPARGRENPYMFADTGIPKLVEQVCG
RGANRRRLIAHAAGGASMMDPQAVFDIGKRNYLALRKILWKAGILLAGEAVGGTNSRTVRLEIGSGRLWLQENGKQKELV
PSFPQKGGN

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_SOLUE (Q01VJ5)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_826605.1
- ProteinModelPortal:   Q01VJ5
- SMR:   Q01VJ5
- STRING:   Q01VJ5
- GeneID:   4426403
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_5371
- NMPDR:   fig|234267.9.peg.5101
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   GGAAMFK
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 18159; Mature: 18159

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIIVGVADCRVGHAPEQVLATYALGSCIGLSIYDPKAAIGGMLHYMLPDSTIDPARGR
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCCCCCCC
ENPYMFADTGIPKLVEQVCGRGANRRRLIAHAAGGASMMDPQAVFDIGKRNYLALRKILW
CCCEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHH
KAGILLAGEAVGGTNSRTVRLEIGSGRLWLQENGKQKELVPSFPQKGGN
HCCEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQIIVGVADCRVGHAPEQVLATYALGSCIGLSIYDPKAAIGGMLHYMLPDSTIDPARGR
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCCCCCCC
ENPYMFADTGIPKLVEQVCGRGANRRRLIAHAAGGASMMDPQAVFDIGKRNYLALRKILW
CCCEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHH
KAGILLAGEAVGGTNSRTVRLEIGSGRLWLQENGKQKELVPSFPQKGGN
HCCEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA