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The map label for this gene is ctpA [H]

Identifier: 116624339

GI number: 116624339

Start: 6593936

End: 6595150

Strand: Direct

Name: ctpA [H]

Synonym: Acid_5257

Alternate gene names: 116624339

Gene position: 6593936-6595150 (Clockwise)

Preceding gene: 116624338

Following gene: 116624342

Centisome position: 66.17

GC content: 62.3

Gene sequence:

>1215_bases
ATGAGTAGCCGCACAAAGTATTTCGTCGTGAGCACCTCAACGTGCCTCACCGTTTTGCTCCTGATCGGGAGCGTGCTCGG
CAGGAGCGCCTCGCCCGATGACACCTACAAACACATGGGCGTGTTCGCCGACGTAGTCTCGCGTATCAAGAGCGAGTACG
TGGAAGAGCCCGACATGAAGAGCGTGACGTTGGGCGCCCTGAATGGCATGCTGGAGGCAATCGACCCGTTCGCCAGCTAC
CTGAATGCCGATCAGTATCGCGACTACCTCAAGAACAAGGACGTCAAGCGCGCCGATGTCGGCCTGATTCTCTCGAAGAA
GTTCGGCTATGTAGGCGTGGTTGGCACCATCACCGGTTCGCCCGCGGCCAAAGCGAACTTTACGACGGGCGACATGATCG
AGAGCATCGGCGGGGTCGCCACGCGCGACATGCCGCTGGCCTACGCCAACATGCTCCTTCAGGGTGAGAGTGGGACCACG
GTGGACCTGAGCGTGGTTCGCGTCCGCCATCCGGAACCCACCAGCGTGAAACTGACACGCGCGGTATTCGCGCTGCCTTC
GGTAGAGAGCCGGGTGATCGGCGACAAGGTTGGCTACATCAATATCGACGCGCTTTCGCCGGCGCTCGTGAAGGAAGTTG
CCGCGAACGTCCAGAAACTGCAGAAGGACGGCGCCCAGAAACTGGTGCTCGACCTGCGCAACTGCGCGACCGGATCCCCC
GAGGACGGCATTGCGCTGGCGAATCTCTTCATGAACAAGGGCCGCATCACCTACCTGGTGGGTCAGAAGGTGGCACGCCA
GAACTTCGAGGCCGATCCCGCGAAGGCGATCAGCAGCCTGCCGCTGGCAATACTGACCAATCGCGGAACGGCCGATGCCG
CCGAAGTTGCGGCCGCCGCGCTGCTCGACAATAAGCGCGCCCAGGTCGTAGGCGAGCGCACTTATGGCGATGCCGCGGTA
CGCCGCGCGATCACGATGGAAGACGGCGGCGCCATTATTCTCTCGGTCGCCAAGTACTACTCCCCGGATGGCGGCAAGGC
CATCCAGGACACCGGCGTGACGCCGAACAACGTGGTCAGCGACGCCGACGCGCAGATCGACGTGGATGACAACGGCGAAC
CCGTGCCGGACGCTGCCGCGGAGAAGGGACCTGAGAAAAAGGTCGAAGACGACGCGGTGGTGAAGAAGGCGCTGGAAGTT
CTGGCGAAGGGTTAG

Upstream 100 bases:

>100_bases
GTTACGTGACAGAAACGGTTGGAAATAGAATAGAACCGAACCGGCGGCCGTCGCGTCCAATCAGTATAATGGCCTTAGGG
CCGGAGCTGTCGATAAACCT

Downstream 100 bases:

>100_bases
GAACCCAAACAGTGGGACAGGCCGGAGAGGCCTGTCCTACAGGGTTTTCAGGTAAGCGATGAGGTCGTCTTTTTCCGCGT
CGCTCAGCATGTCCTTATAA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSSRTKYFVVSTSTCLTVLLLIGSVLGRSASPDDTYKHMGVFADVVSRIKSEYVEEPDMKSVTLGALNGMLEAIDPFASY
LNADQYRDYLKNKDVKRADVGLILSKKFGYVGVVGTITGSPAAKANFTTGDMIESIGGVATRDMPLAYANMLLQGESGTT
VDLSVVRVRHPEPTSVKLTRAVFALPSVESRVIGDKVGYINIDALSPALVKEVAANVQKLQKDGAQKLVLDLRNCATGSP
EDGIALANLFMNKGRITYLVGQKVARQNFEADPAKAISSLPLAILTNRGTADAAEVAAAALLDNKRAQVVGERTYGDAAV
RRAITMEDGGAIILSVAKYYSPDGGKAIQDTGVTPNNVVSDADAQIDVDDNGEPVPDAAAEKGPEKKVEDDAVVKKALEV
LAKG

Sequences:

>Translated_404_residues
MSSRTKYFVVSTSTCLTVLLLIGSVLGRSASPDDTYKHMGVFADVVSRIKSEYVEEPDMKSVTLGALNGMLEAIDPFASY
LNADQYRDYLKNKDVKRADVGLILSKKFGYVGVVGTITGSPAAKANFTTGDMIESIGGVATRDMPLAYANMLLQGESGTT
VDLSVVRVRHPEPTSVKLTRAVFALPSVESRVIGDKVGYINIDALSPALVKEVAANVQKLQKDGAQKLVLDLRNCATGSP
EDGIALANLFMNKGRITYLVGQKVARQNFEADPAKAISSLPLAILTNRGTADAAEVAAAALLDNKRAQVVGERTYGDAAV
RRAITMEDGGAIILSVAKYYSPDGGKAIQDTGVTPNNVVSDADAQIDVDDNGEPVPDAAAEKGPEKKVEDDAVVKKALEV
LAKG
>Mature_403_residues
SSRTKYFVVSTSTCLTVLLLIGSVLGRSASPDDTYKHMGVFADVVSRIKSEYVEEPDMKSVTLGALNGMLEAIDPFASYL
NADQYRDYLKNKDVKRADVGLILSKKFGYVGVVGTITGSPAAKANFTTGDMIESIGGVATRDMPLAYANMLLQGESGTTV
DLSVVRVRHPEPTSVKLTRAVFALPSVESRVIGDKVGYINIDALSPALVKEVAANVQKLQKDGAQKLVLDLRNCATGSPE
DGIALANLFMNKGRITYLVGQKVARQNFEADPAKAISSLPLAILTNRGTADAAEVAAAALLDNKRAQVVGERTYGDAAVR
RAITMEDGGAIILSVAKYYSPDGGKAIQDTGVTPNNVVSDADAQIDVDDNGEPVPDAAAEKGPEKKVEDDAVVKKALEVL
AKG

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=24.7787610619469, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 42771; Mature: 42640

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRTKYFVVSTSTCLTVLLLIGSVLGRSASPDDTYKHMGVFADVVSRIKSEYVEEPDMK
CCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
SVTLGALNGMLEAIDPFASYLNADQYRDYLKNKDVKRADVGLILSKKFGYVGVVGTITGS
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHCEEEECCCCEEEEEEEECCC
PAAKANFTTGDMIESIGGVATRDMPLAYANMLLQGESGTTVDLSVVRVRHPEPTSVKLTR
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCEEEEEEEEEECCCCCCEEHHH
AVFALPSVESRVIGDKVGYINIDALSPALVKEVAANVQKLQKDGAQKLVLDLRNCATGSP
HHHHCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
EDGIALANLFMNKGRITYLVGQKVARQNFEADPAKAISSLPLAILTNRGTADAAEVAAAA
CCCHHHHHHHHCCCCEEEEECHHHHHCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHH
LLDNKRAQVVGERTYGDAAVRRAITMEDGGAIILSVAKYYSPDGGKAIQDTGVTPNNVVS
HHCCCHHHEECCCCCCHHHHHHEEEECCCCEEEEEEHHHHCCCCCCEEECCCCCCCCCCC
DADAQIDVDDNGEPVPDAAAEKGPEKKVEDDAVVKKALEVLAKG
CCCCEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSRTKYFVVSTSTCLTVLLLIGSVLGRSASPDDTYKHMGVFADVVSRIKSEYVEEPDMK
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
SVTLGALNGMLEAIDPFASYLNADQYRDYLKNKDVKRADVGLILSKKFGYVGVVGTITGS
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHCEEEECCCCEEEEEEEECCC
PAAKANFTTGDMIESIGGVATRDMPLAYANMLLQGESGTTVDLSVVRVRHPEPTSVKLTR
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCEEEEEEEEEECCCCCCEEHHH
AVFALPSVESRVIGDKVGYINIDALSPALVKEVAANVQKLQKDGAQKLVLDLRNCATGSP
HHHHCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
EDGIALANLFMNKGRITYLVGQKVARQNFEADPAKAISSLPLAILTNRGTADAAEVAAAA
CCCHHHHHHHHCCCCEEEEECHHHHHCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHH
LLDNKRAQVVGERTYGDAAVRRAITMEDGGAIILSVAKYYSPDGGKAIQDTGVTPNNVVS
HHCCCHHHEECCCCCCHHHHHHEEEECCCCEEEEEEHHHHCCCCCCEEECCCCCCCCCCC
DADAQIDVDDNGEPVPDAAAEKGPEKKVEDDAVVKKALEVLAKG
CCCCEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]