| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is uxuA2 [H]
Identifier: 116624146
GI number: 116624146
Start: 6395182
End: 6396267
Strand: Reverse
Name: uxuA2 [H]
Synonym: Acid_5062
Alternate gene names: 116624146
Gene position: 6396267-6395182 (Counterclockwise)
Preceding gene: 116624147
Following gene: 116624140
Centisome position: 64.18
GC content: 61.23
Gene sequence:
>1086_bases ATGACCAGATCAGCAATTACCAGATCGGAATTCGGCAAAACGATCCTCGGTGCCATTCTCGCGGCGCGCCAATCGCGCGC CGCGGTTCATTCCAACGCGCCTGGCATCAAGCTCTGCGCGCAGTCGGGTGCCACCCCGACGGATGAGCAACTGCTCTTCC TGAAACAAATCGGCGCGGAGTATGTCAGCGTCGGATCTACGCCGGAATTGCGCACCGCCGAGGGCTTCCTCCAAATCAAG AAGCGCTACGCCGATGCCGGCATTACGGTCTGGAACATCGGCAACACCAGCGTGCACAATATGCCGGAAGTCACGCTCAA CCTGCCGGGCCGCGACCAGAAGGTCGAGGAATACAAGCAGTACCTGCGCAACCTCGGCAAGGCCGGCATTTACTACACCA CGTACGCCCACATGGGCAACGGCATCTGGTCGAGCGGCCGCTCCGAAATTCGCGGAGCCTCGGCTCGCGAGTTCGATATG AACAGCCCCGCCAAGGCGGGCGTGTGGGACGGCAAGACGTGGAAGGAGCCGCTCTCCCACGGCCGTGTCTTCACCAAGGA AGAGATCTGGGACAACTTCACCTACTTCATCAAGCAGGTGGCGCCGGTGGCGGAGGAAAACAGCGTGCGCATCGGCATTC ACCCGGACGATCCGCCGGTGCCGGTGCTGGCCGGAGTGCCGCGGTGCATCTTCAGCAATTTCGAGGGCTACAAGCGAGCG CTCGAGATCGCCAACAGTCCCAACGTCGGCATCTGCCTGTGCTGCGGCACGTGGCTCGAAGGCGGCAAGGCACTCACCGG CAAGGATCCCGAGGAGATGATCCGCTACTTCGGCGCCAAGAAAATCTGGAAGATCCACTTTCGCAATGTGACCGCGCCCC TGCCGCACTTCGTCGAGACCTTCATGGACGATGGCTACTACGACATGTACAAGATCATGAAGGCGCTGCGCGACGTCAAC TACGATGGGATCGTCATCCTGGATCACTCGCCCGGGATGGTCGGCGGCAACTACGCGCAGACGGCCTACGGGTACGGCTA CATGCGCGCGCTATTGAATCGCGCCAACGCCGAAGCCAAACGCTAA
Upstream 100 bases:
>100_bases CCTGCGCCCCATGGGCGGTAAGGTCCCTGCGATCTACGGCGAAAGTTACGATTCCGCCGCCGCCCGCAAAGCCGCGCAGT AGCGACTACACTATTAGCCG
Downstream 100 bases:
>100_bases GTCGTCAAATTCCCGAGCCACTCCAGCGCCCGCAGACCTGGCATGAAGCAGTATTCGCCTCCGCGCGTGACCACGAATCG CGGCAGCCCCTGCAATCGCC
Product: D-mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase 2 [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTRSAITRSEFGKTILGAILAARQSRAAVHSNAPGIKLCAQSGATPTDEQLLFLKQIGAEYVSVGSTPELRTAEGFLQIK KRYADAGITVWNIGNTSVHNMPEVTLNLPGRDQKVEEYKQYLRNLGKAGIYYTTYAHMGNGIWSSGRSEIRGASAREFDM NSPAKAGVWDGKTWKEPLSHGRVFTKEEIWDNFTYFIKQVAPVAEENSVRIGIHPDDPPVPVLAGVPRCIFSNFEGYKRA LEIANSPNVGICLCCGTWLEGGKALTGKDPEEMIRYFGAKKIWKIHFRNVTAPLPHFVETFMDDGYYDMYKIMKALRDVN YDGIVILDHSPGMVGGNYAQTAYGYGYMRALLNRANAEAKR
Sequences:
>Translated_361_residues MTRSAITRSEFGKTILGAILAARQSRAAVHSNAPGIKLCAQSGATPTDEQLLFLKQIGAEYVSVGSTPELRTAEGFLQIK KRYADAGITVWNIGNTSVHNMPEVTLNLPGRDQKVEEYKQYLRNLGKAGIYYTTYAHMGNGIWSSGRSEIRGASAREFDM NSPAKAGVWDGKTWKEPLSHGRVFTKEEIWDNFTYFIKQVAPVAEENSVRIGIHPDDPPVPVLAGVPRCIFSNFEGYKRA LEIANSPNVGICLCCGTWLEGGKALTGKDPEEMIRYFGAKKIWKIHFRNVTAPLPHFVETFMDDGYYDMYKIMKALRDVN YDGIVILDHSPGMVGGNYAQTAYGYGYMRALLNRANAEAKR >Mature_360_residues TRSAITRSEFGKTILGAILAARQSRAAVHSNAPGIKLCAQSGATPTDEQLLFLKQIGAEYVSVGSTPELRTAEGFLQIKK RYADAGITVWNIGNTSVHNMPEVTLNLPGRDQKVEEYKQYLRNLGKAGIYYTTYAHMGNGIWSSGRSEIRGASAREFDMN SPAKAGVWDGKTWKEPLSHGRVFTKEEIWDNFTYFIKQVAPVAEENSVRIGIHPDDPPVPVLAGVPRCIFSNFEGYKRAL EIANSPNVGICLCCGTWLEGGKALTGKDPEEMIRYFGAKKIWKIHFRNVTAPLPHFVETFMDDGYYDMYKIMKALRDVNY DGIVILDHSPGMVGGNYAQTAYGYGYMRALLNRANAEAKR
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=302, Percent_Identity=27.4834437086093, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 40122; Mature: 39991
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSAITRSEFGKTILGAILAARQSRAAVHSNAPGIKLCAQSGATPTDEQLLFLKQIGAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCHH YVSVGSTPELRTAEGFLQIKKRYADAGITVWNIGNTSVHNMPEVTLNLPGRDQKVEEYKQ HEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHH YLRNLGKAGIYYTTYAHMGNGIWSSGRSEIRGASAREFDMNSPAKAGVWDGKTWKEPLSH HHHHHCCCCEEEEEHHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC GRVFTKEEIWDNFTYFIKQVAPVAEENSVRIGIHPDDPPVPVLAGVPRCIFSNFEGYKRA CCEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCHHHHHHCHHHHHHH LEIANSPNVGICLCCGTWLEGGKALTGKDPEEMIRYFGAKKIWKIHFRNVTAPLPHFVET HHHCCCCCCEEEEEECCHHCCCEECCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH FMDDGYYDMYKIMKALRDVNYDGIVILDHSPGMVGGNYAQTAYGYGYMRALLNRANAEAK HHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC R C >Mature Secondary Structure TRSAITRSEFGKTILGAILAARQSRAAVHSNAPGIKLCAQSGATPTDEQLLFLKQIGAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCHH YVSVGSTPELRTAEGFLQIKKRYADAGITVWNIGNTSVHNMPEVTLNLPGRDQKVEEYKQ HEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHH YLRNLGKAGIYYTTYAHMGNGIWSSGRSEIRGASAREFDMNSPAKAGVWDGKTWKEPLSH HHHHHCCCCEEEEEHHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC GRVFTKEEIWDNFTYFIKQVAPVAEENSVRIGIHPDDPPVPVLAGVPRCIFSNFEGYKRA CCEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCHHHHHHCHHHHHHH LEIANSPNVGICLCCGTWLEGGKALTGKDPEEMIRYFGAKKIWKIHFRNVTAPLPHFVET HHHCCCCCCEEEEEECCHHCCCEECCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH FMDDGYYDMYKIMKALRDVNYDGIVILDHSPGMVGGNYAQTAYGYGYMRALLNRANAEAK HHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA