Click here to switch to the map view.

The map label for this gene is 116624129

Identifier: 116624129

GI number: 116624129

Start: 6371095

End: 6371979

Strand: Reverse

Name: 116624129

Synonym: Acid_5045

Alternate gene names: NA

Gene position: 6371979-6371095 (Counterclockwise)

Preceding gene: 116624131

Following gene: 116624128

Centisome position: 63.94

GC content: 61.24

Gene sequence:

>885_bases
ATGCTGCATGGTATGTTCTTGGGCATGAGATCGCAAGGTTCAATTTCCCGCCGCGGATTCCTCGCGGCGACAGCCGCCGC
TCCGCTCGCGCTGGCTATTCCCGCCGGTAAAGGCCTGCCCATCGGCATCGAACTGTACTCGGTGCGGGACGAGATGGCGA
AAGACACGCTTGCCACGGTGCGCGCTATCGGCAAGATGGGATATGAAGTGGTGGAGTTCTACGGGCCGTACTACCAGTGG
ACGCCGGAATTCGCCAAGGATGTGCGCAAGGCTCTGGACGAGACCGGCATGCGCTGCAATTCGACGCATAACGATGCGAA
GAATTTGCGGCCCGAGGGAATCCAGAAGGCGATCGATTTGAACAAGACGATCGGGTCGAAGTACGTGGTGGTGGCGAGCG
CCGGACGGGTGGACGGGCTCGACGGGTGGAAGGCGCTGGGCGAGAGCCTGACGAAGGCGATGGAGACGCTGCGTCCGGTA
GGGCTGAGCTCGGGGTATCACAATCACCAGGCGGAGTTTAAGCCGCTGGATGGCAAGCGGCCGATCGAGGTCCTGGCCGC
GAATACGCCGAAGGATTTCATGATGCAGTTCGATGTCGGGACTTGCGTGGAGGTGGGCGACGATCCGGTGGCATGGATCA
ACGCCAATCCGGGGCGGATTAAATCGCTGCACCTGAAGGATTGGGGCAAGCCGGAGGAAGGCAACAAGGAGCGCGGATAC
CGGGTGCTGTTCGGCGAAGGCGATGCTCCATGGCAGAAGATCTTCGCGGCGGCGGAGGCGAAGGGCGGGGCGGAATATTA
CTTGATCGAGCAGGAGGGCAGCCGGTATCCGAGTTTGGAGACGGCACAGCGCTGCCTGGCGAATTATAAGAAGATGCGGG
CGTAA

Upstream 100 bases:

>100_bases
ATGATGATTCCGGCCCGGCGGAGGTGGATTGGAGAATTCACTTCGCTGTTCCCAGGATACTACGTGGAATCCTACGCGCC
AGCCGGCATTACGTTTGTTG

Downstream 100 bases:

>100_bases
CCTGCGGCCCGGGTGCGCCGCGCTGCAGCGGGGCGAGCCGGCTGAAAGCCGGCTGCAGGCAGGATTGCCTGCCCCCCAAA
AGCAAGCAATGCACAGCAAT

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Family Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Sugar Phosphate Isomerases/Epimerases; Xlose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLHGMFLGMRSQGSISRRGFLAATAAAPLALAIPAGKGLPIGIELYSVRDEMAKDTLATVRAIGKMGYEVVEFYGPYYQW
TPEFAKDVRKALDETGMRCNSTHNDAKNLRPEGIQKAIDLNKTIGSKYVVVASAGRVDGLDGWKALGESLTKAMETLRPV
GLSSGYHNHQAEFKPLDGKRPIEVLAANTPKDFMMQFDVGTCVEVGDDPVAWINANPGRIKSLHLKDWGKPEEGNKERGY
RVLFGEGDAPWQKIFAAAEAKGGAEYYLIEQEGSRYPSLETAQRCLANYKKMRA

Sequences:

>Translated_294_residues
MLHGMFLGMRSQGSISRRGFLAATAAAPLALAIPAGKGLPIGIELYSVRDEMAKDTLATVRAIGKMGYEVVEFYGPYYQW
TPEFAKDVRKALDETGMRCNSTHNDAKNLRPEGIQKAIDLNKTIGSKYVVVASAGRVDGLDGWKALGESLTKAMETLRPV
GLSSGYHNHQAEFKPLDGKRPIEVLAANTPKDFMMQFDVGTCVEVGDDPVAWINANPGRIKSLHLKDWGKPEEGNKERGY
RVLFGEGDAPWQKIFAAAEAKGGAEYYLIEQEGSRYPSLETAQRCLANYKKMRA
>Mature_294_residues
MLHGMFLGMRSQGSISRRGFLAATAAAPLALAIPAGKGLPIGIELYSVRDEMAKDTLATVRAIGKMGYEVVEFYGPYYQW
TPEFAKDVRKALDETGMRCNSTHNDAKNLRPEGIQKAIDLNKTIGSKYVVVASAGRVDGLDGWKALGESLTKAMETLRPV
GLSSGYHNHQAEFKPLDGKRPIEVLAANTPKDFMMQFDVGTCVEVGDDPVAWINANPGRIKSLHLKDWGKPEEGNKERGY
RVLFGEGDAPWQKIFAAAEAKGGAEYYLIEQEGSRYPSLETAQRCLANYKKMRA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32307; Mature: 32307

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHGMFLGMRSQGSISRRGFLAATAAAPLALAIPAGKGLPIGIELYSVRDEMAKDTLATV
CCCCEEEECCCCCCCCCCCEEEEHHHCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHH
RAIGKMGYEVVEFYGPYYQWTPEFAKDVRKALDETGMRCNSTHNDAKNLRPEGIQKAIDL
HHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHH
NKTIGSKYVVVASAGRVDGLDGWKALGESLTKAMETLRPVGLSSGYHNHQAEFKPLDGKR
HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PIEVLAANTPKDFMMQFDVGTCVEVGDDPVAWINANPGRIKSLHLKDWGKPEEGNKERGY
CEEEEECCCCHHHEEEECCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCE
RVLFGEGDAPWQKIFAAAEAKGGAEYYLIEQEGSRYPSLETAQRCLANYKKMRA
EEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHGMFLGMRSQGSISRRGFLAATAAAPLALAIPAGKGLPIGIELYSVRDEMAKDTLATV
CCCCEEEECCCCCCCCCCCEEEEHHHCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHH
RAIGKMGYEVVEFYGPYYQWTPEFAKDVRKALDETGMRCNSTHNDAKNLRPEGIQKAIDL
HHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHH
NKTIGSKYVVVASAGRVDGLDGWKALGESLTKAMETLRPVGLSSGYHNHQAEFKPLDGKR
HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PIEVLAANTPKDFMMQFDVGTCVEVGDDPVAWINANPGRIKSLHLKDWGKPEEGNKERGY
CEEEEECCCCHHHEEEECCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCE
RVLFGEGDAPWQKIFAAAEAKGGAEYYLIEQEGSRYPSLETAQRCLANYKKMRA
EEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA