Click here to switch to the map view.

The map label for this gene is yfeW [C]

Identifier: 116624094

GI number: 116624094

Start: 6322575

End: 6323795

Strand: Reverse

Name: yfeW [C]

Synonym: Acid_5009

Alternate gene names: 116624094

Gene position: 6323795-6322575 (Counterclockwise)

Preceding gene: 116624099

Following gene: 116624093

Centisome position: 63.46

GC content: 60.93

Gene sequence:

>1221_bases
ATGCGACATGTAAATCGCCGTACGTTTCTCGCCGCGGGCACAGGAGTTGCCGCGCGGTCCCTTTTTGCCGAGAGTGGGGA
TTCCGGCGTCATCGACGGGGCACTGCGTTGGGGCGTTGCGCGCCGCAAGATTCCCGCAGTGGTGGCGATGGCTGCCAGCG
AAAGCAAGACGCTGTACACGGGCGCGTTCGGCACTCGTGATTCCTCGGGCGAGCCAGTGACGGCAGATTGCATTTTCGCG
ATCGCGTCGATGACGAAAGCGGTTACGACGGTAGCTGCGCTGCAACTGGTGGAGCAGGGGAAGGTGGACCCGGAGGGTCC
GGTCTCGAAGTACCTTCCGCAACTAGCCAACCTCGAAGTGCTGGTGGAATTCGATGCAAACGGGAAGGCGGTGCTGGCGC
CGGCGAAGACGCCTGTGACGCTGCGGCACCTGCTGACGCATACGGCCGGATTCTGCTACGACACGTGGGACGGAGACATG
TTCCGGTACGTTTCGCAAAAGCCGGCGCCGGACATGACGAAGCCCGGGCCACTGATGTTCGAGCCGGGTAAGCGCTGGCA
ATACGGCCAGGGTGTGGACTGGGCAGGGCGCCTGGTGGAGGCAGTCAGCGGCATGACGCTGGAGAATTATTTCCAGGAGA
AGATTTTCCGGCCTTTGGGGATGACGGACACAAGCTATATTCTTCCCGCGTCGAAGTTTGGGCGGCTGGTGAGCCGGTAT
CATCGGGATGCAAGCGGGGAGTTGCAACAGGATGAGCGCAAGATGCCGCCGACGCCCAAGGCATTCAATGGGGGCGGAGG
GCTGTACAGCACGGCGGCCGACTATGTGCGATTCATGCAGATGATTTTGAATCGGGGCAAGGGGCCGAATGACACGCAGA
TTCTGAAGGCGGCGGCGGTGGACAGCATGTCAACGAATCAGATCGGAGCGTTGACCGCGGGGAAGATGAAGAGCTACAGG
CCGGAAAGCTCGAGCGACGTAGACATTCAGCCGGGGCATACCGAGAAGTGGGGCCTCGGATTCCTGATCAACACGTCCGC
ATATTCGGGCGGGCGCTCGGCGGGCAGCCTGGCATGGGCCGGCCTGTACAACACCTACTATTGGATCGACCCGAAGAAGA
AGCGTTGCGCAGTGATCCTGATGCAGTACCTGCCGTTCGTGGACAAGGAAGCGATCGGGATGCTGAGCGATTTCGAAAAG
GCGGTATACAGCAACCTGTAG

Upstream 100 bases:

>100_bases
AGAAGGGCCGCCAAGAGGGGGAATACCCGGAAACCCTTGATCACATGCATCGGTGCGAGTATACAACGGGATTTTCTCGG
TGTAGGATCTACAGAAGCCT

Downstream 100 bases:

>100_bases
GGAACCTGTTACGCTTTTTAGATGCGTTTTTTGGCTCTCCTGCTGTGCGCGGCGGCGCATTCCGCCAGTCTGCCTGCCAA
TCTATACGATCACCTACACT

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MRHVNRRTFLAAGTGVAARSLFAESGDSGVIDGALRWGVARRKIPAVVAMAASESKTLYTGAFGTRDSSGEPVTADCIFA
IASMTKAVTTVAALQLVEQGKVDPEGPVSKYLPQLANLEVLVEFDANGKAVLAPAKTPVTLRHLLTHTAGFCYDTWDGDM
FRYVSQKPAPDMTKPGPLMFEPGKRWQYGQGVDWAGRLVEAVSGMTLENYFQEKIFRPLGMTDTSYILPASKFGRLVSRY
HRDASGELQQDERKMPPTPKAFNGGGGLYSTAADYVRFMQMILNRGKGPNDTQILKAAAVDSMSTNQIGALTAGKMKSYR
PESSSDVDIQPGHTEKWGLGFLINTSAYSGGRSAGSLAWAGLYNTYYWIDPKKKRCAVILMQYLPFVDKEAIGMLSDFEK
AVYSNL

Sequences:

>Translated_406_residues
MRHVNRRTFLAAGTGVAARSLFAESGDSGVIDGALRWGVARRKIPAVVAMAASESKTLYTGAFGTRDSSGEPVTADCIFA
IASMTKAVTTVAALQLVEQGKVDPEGPVSKYLPQLANLEVLVEFDANGKAVLAPAKTPVTLRHLLTHTAGFCYDTWDGDM
FRYVSQKPAPDMTKPGPLMFEPGKRWQYGQGVDWAGRLVEAVSGMTLENYFQEKIFRPLGMTDTSYILPASKFGRLVSRY
HRDASGELQQDERKMPPTPKAFNGGGGLYSTAADYVRFMQMILNRGKGPNDTQILKAAAVDSMSTNQIGALTAGKMKSYR
PESSSDVDIQPGHTEKWGLGFLINTSAYSGGRSAGSLAWAGLYNTYYWIDPKKKRCAVILMQYLPFVDKEAIGMLSDFEK
AVYSNL
>Mature_406_residues
MRHVNRRTFLAAGTGVAARSLFAESGDSGVIDGALRWGVARRKIPAVVAMAASESKTLYTGAFGTRDSSGEPVTADCIFA
IASMTKAVTTVAALQLVEQGKVDPEGPVSKYLPQLANLEVLVEFDANGKAVLAPAKTPVTLRHLLTHTAGFCYDTWDGDM
FRYVSQKPAPDMTKPGPLMFEPGKRWQYGQGVDWAGRLVEAVSGMTLENYFQEKIFRPLGMTDTSYILPASKFGRLVSRY
HRDASGELQQDERKMPPTPKAFNGGGGLYSTAADYVRFMQMILNRGKGPNDTQILKAAAVDSMSTNQIGALTAGKMKSYR
PESSSDVDIQPGHTEKWGLGFLINTSAYSGGRSAGSLAWAGLYNTYYWIDPKKKRCAVILMQYLPFVDKEAIGMLSDFEK
AVYSNL

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=300, Percent_Identity=28, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786574, Length=216, Percent_Identity=30.0925925925926, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 44253; Mature: 44253

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHVNRRTFLAAGTGVAARSLFAESGDSGVIDGALRWGVARRKIPAVVAMAASESKTLYT
CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCEEEE
GAFGTRDSSGEPVTADCIFAIASMTKAVTTVAALQLVEQGKVDPEGPVSKYLPQLANLEV
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEE
LVEFDANGKAVLAPAKTPVTLRHLLTHTAGFCYDTWDGDMFRYVSQKPAPDMTKPGPLMF
EEEECCCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCCCCCEEE
EPGKRWQYGQGVDWAGRLVEAVSGMTLENYFQEKIFRPLGMTDTSYILPASKFGRLVSRY
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHH
HRDASGELQQDERKMPPTPKAFNGGGGLYSTAADYVRFMQMILNRGKGPNDTQILKAAAV
HCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DSMSTNQIGALTAGKMKSYRPESSSDVDIQPGHTEKWGLGFLINTSAYSGGRSAGSLAWA
CCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
GLYNTYYWIDPKKKRCAVILMQYLPFVDKEAIGMLSDFEKAVYSNL
ECCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHVNRRTFLAAGTGVAARSLFAESGDSGVIDGALRWGVARRKIPAVVAMAASESKTLYT
CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCEEEE
GAFGTRDSSGEPVTADCIFAIASMTKAVTTVAALQLVEQGKVDPEGPVSKYLPQLANLEV
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEE
LVEFDANGKAVLAPAKTPVTLRHLLTHTAGFCYDTWDGDMFRYVSQKPAPDMTKPGPLMF
EEEECCCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCCCCCEEE
EPGKRWQYGQGVDWAGRLVEAVSGMTLENYFQEKIFRPLGMTDTSYILPASKFGRLVSRY
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHH
HRDASGELQQDERKMPPTPKAFNGGGGLYSTAADYVRFMQMILNRGKGPNDTQILKAAAV
HCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DSMSTNQIGALTAGKMKSYRPESSSDVDIQPGHTEKWGLGFLINTSAYSGGRSAGSLAWA
CCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
GLYNTYYWIDPKKKRCAVILMQYLPFVDKEAIGMLSDFEKAVYSNL
ECCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]