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The map label for this gene is yhcS [H]

Identifier: 116624070

GI number: 116624070

Start: 6292627

End: 6293022

Strand: Reverse

Name: yhcS [H]

Synonym: Acid_4984

Alternate gene names: 116624070

Gene position: 6293022-6292627 (Counterclockwise)

Preceding gene: 116624071

Following gene: 116624067

Centisome position: 63.15

GC content: 60.86

Gene sequence:

>396_bases
ATGACGACTCTCGTGGGGAAACTCGAGGTCACGCGGCTGCACATCTCCGCGATGGTAAGGGAAGGCGTGGATGAGGCAAC
GCTCGCAATCGCGGCCGGCCGTATTCCGCACACGGCGCTCCCCGGCACAATCGGCAACGTGGGCATTGCGGCGCATCGCG
ACACCCTCTTTCACAATCTGAAAGACGTGCGGCTGGGCGACGAGATCAAGCTCACCACGCTGGAGGGCGAGTATGTCTAT
CGCGTGGTCTCCCGGCGGATTGTCGCGCCCTCGGACGTCTGGATTCTCGACCTCACGCAAGCGGAAAGAGTATTAACGCT
GCTCACTTGTTATCCGTTCTACTACATCGGCAGCGCGCCGTGGCGGTTCATTGTGGGGGTCGTTCAGGTGCAGTAA

Upstream 100 bases:

>100_bases
TTGGCTATGCAGCGTCGAAGGCGGCGACGGGTATGTTTATCAGGCTTACGAAACGCGTGCGTTCGATCACGCCGTGGTGT
TGCGAACGGCGGGTGCGCCG

Downstream 100 bases:

>100_bases
TCTACGGAGCCCAGCCCGGCATTACATAGGCGTAGAACATCACAAGGATGCCGATCACGCTGGCGAGAAAGATGCTGTGG
CGGAGCGTGAAGCGGAAAAG

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTTLVGKLEVTRLHISAMVREGVDEATLAIAAGRIPHTALPGTIGNVGIAAHRDTLFHNLKDVRLGDEIKLTTLEGEYVY
RVVSRRIVAPSDVWILDLTQAERVLTLLTCYPFYYIGSAPWRFIVGVVQVQ

Sequences:

>Translated_131_residues
MTTLVGKLEVTRLHISAMVREGVDEATLAIAAGRIPHTALPGTIGNVGIAAHRDTLFHNLKDVRLGDEIKLTTLEGEYVY
RVVSRRIVAPSDVWILDLTQAERVLTLLTCYPFYYIGSAPWRFIVGVVQVQ
>Mature_130_residues
TTLVGKLEVTRLHISAMVREGVDEATLAIAAGRIPHTALPGTIGNVGIAAHRDTLFHNLKDVRLGDEIKLTTLEGEYVYR
VVSRRIVAPSDVWILDLTQAERVLTLLTCYPFYYIGSAPWRFIVGVVQVQ

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 14530; Mature: 14399

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLVGKLEVTRLHISAMVREGVDEATLAIAAGRIPHTALPGTIGNVGIAAHRDTLFHNL
CCCEECEEEEHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCEEECHHHHHHCH
KDVRLGDEIKLTTLEGEYVYRVVSRRIVAPSDVWILDLTQAERVLTLLTCYPFYYIGSAP
HCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCCC
WRFIVGVVQVQ
HHEEEEEEEEC
>Mature Secondary Structure 
TTLVGKLEVTRLHISAMVREGVDEATLAIAAGRIPHTALPGTIGNVGIAAHRDTLFHNL
CCEECEEEEHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCEEECHHHHHHCH
KDVRLGDEIKLTTLEGEYVYRVVSRRIVAPSDVWILDLTQAERVLTLLTCYPFYYIGSAP
HCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCCC
WRFIVGVVQVQ
HHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]