| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624064
Identifier: 116624064
GI number: 116624064
Start: 6286899
End: 6287720
Strand: Direct
Name: 116624064
Synonym: Acid_4978
Alternate gene names: NA
Gene position: 6286899-6287720 (Clockwise)
Preceding gene: 116624063
Following gene: 116624068
Centisome position: 63.09
GC content: 59.0
Gene sequence:
>822_bases GTGACTATCCAACACTGGAGCGCTGTCGCCTGCGCGTGTGCCCTGTTGCCGGCCACCACACTCCCGGCCCAGCAGCAGCC GTTCCAGACACATTCGGCATCTACGCTGGATTACAGCATCAGGGACGGCCAACAAGCCGTCGAGATCAGCAACGTCGCGT ACGAGATGACTAACGATGGAATCCCAGGCCTTCCACGCGATCAGCGGCTGATTCTCCGCAAGACCACGCGCACGACGGAA CTCGTCGGCGATATCGGCACGGAGGCCTCCACCACCGTCCAGGCGTGGCCACTCGGAGTCGATTTAAAGGAGAAACCTCT CTACTCGCTGACCGTTTCCGGCGTGGAACCGAAGACGGTCAATAGCGAGCTGTTATCGATTTCGCGAGGCCTCGAGGAAG TTGAATGGTGGTCGGTCTATTCGCTGGGAACTGGGGGACATCTGTTCGATACCTACGTTCCGCTCGTCCAGTTCTCCACC ACCCGCGATGTGCAGACATTACGCTACGCTGGGCTTGAAGTACCACCTGACGACACCACCGATCCCCGCCTGCGCGCGCC GAATGTCATCGCAGTCCTGACGTATGCCTCTGCTGCCGGTATACTGAGGGAAGCGCTTATTACTGGCGACAGCCCCAAGG TCACGCGCCTCCTCCGTTCTTACGCCGATACCATTCGGAAACTGACGGTTGATTCCGGCAACCGGATCACGATTGCGATT AGCCCAACCCACACAATGGCCATTCCGATTGTGAAGGACGACCTCGACTTCGCGCGTGCCACAGCCACAACTGGTCTGCG CATTACTTCGTGGAAGCGTTAG
Upstream 100 bases:
>100_bases AAGATGATCTAGAGTTGCTGAATCGTCGAAACGGCACGGTCCTCGGGCGCTAGCGGGAGTCGGCGGGCGGGATCGAGGCG CTCTGCGCTAGACTGCGTCT
Downstream 100 bases:
>100_bases CGGGTCGAATCGTTCTCATTGGGCGGCGGACCGCGCCGCAACACCCGCACCAGCACGGTTTTTTTGCCGAATGCTTTCGC CCGCGCCGCGCCGTGTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTIQHWSAVACACALLPATTLPAQQQPFQTHSASTLDYSIRDGQQAVEISNVAYEMTNDGIPGLPRDQRLILRKTTRTTE LVGDIGTEASTTVQAWPLGVDLKEKPLYSLTVSGVEPKTVNSELLSISRGLEEVEWWSVYSLGTGGHLFDTYVPLVQFST TRDVQTLRYAGLEVPPDDTTDPRLRAPNVIAVLTYASAAGILREALITGDSPKVTRLLRSYADTIRKLTVDSGNRITIAI SPTHTMAIPIVKDDLDFARATATTGLRITSWKR
Sequences:
>Translated_273_residues MTIQHWSAVACACALLPATTLPAQQQPFQTHSASTLDYSIRDGQQAVEISNVAYEMTNDGIPGLPRDQRLILRKTTRTTE LVGDIGTEASTTVQAWPLGVDLKEKPLYSLTVSGVEPKTVNSELLSISRGLEEVEWWSVYSLGTGGHLFDTYVPLVQFST TRDVQTLRYAGLEVPPDDTTDPRLRAPNVIAVLTYASAAGILREALITGDSPKVTRLLRSYADTIRKLTVDSGNRITIAI SPTHTMAIPIVKDDLDFARATATTGLRITSWKR >Mature_272_residues TIQHWSAVACACALLPATTLPAQQQPFQTHSASTLDYSIRDGQQAVEISNVAYEMTNDGIPGLPRDQRLILRKTTRTTEL VGDIGTEASTTVQAWPLGVDLKEKPLYSLTVSGVEPKTVNSELLSISRGLEEVEWWSVYSLGTGGHLFDTYVPLVQFSTT RDVQTLRYAGLEVPPDDTTDPRLRAPNVIAVLTYASAAGILREALITGDSPKVTRLLRSYADTIRKLTVDSGNRITIAIS PTHTMAIPIVKDDLDFARATATTGLRITSWKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29854; Mature: 29723
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQHWSAVACACALLPATTLPAQQQPFQTHSASTLDYSIRDGQQAVEISNVAYEMTNDG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHEEHHHEEEEECCCC IPGLPRDQRLILRKTTRTTELVGDIGTEASTTVQAWPLGVDLKEKPLYSLTVSGVEPKTV CCCCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCH NSELLSISRGLEEVEWWSVYSLGTGGHLFDTYVPLVQFSTTRDVQTLRYAGLEVPPDDTT HHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHHEEECCCCCHHHHHHCCCCCCCCCCC DPRLRAPNVIAVLTYASAAGILREALITGDSPKVTRLLRSYADTIRKLTVDSGNRITIAI CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEEE SPTHTMAIPIVKDDLDFARATATTGLRITSWKR CCCCEEEEEEEECCCHHHHHHHCCCEEEECCCC >Mature Secondary Structure TIQHWSAVACACALLPATTLPAQQQPFQTHSASTLDYSIRDGQQAVEISNVAYEMTNDG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHEEHHHEEEEECCCC IPGLPRDQRLILRKTTRTTELVGDIGTEASTTVQAWPLGVDLKEKPLYSLTVSGVEPKTV CCCCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCH NSELLSISRGLEEVEWWSVYSLGTGGHLFDTYVPLVQFSTTRDVQTLRYAGLEVPPDDTT HHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHHEEECCCCCHHHHHHCCCCCCCCCCC DPRLRAPNVIAVLTYASAAGILREALITGDSPKVTRLLRSYADTIRKLTVDSGNRITIAI CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEEE SPTHTMAIPIVKDDLDFARATATTGLRITSWKR CCCCEEEEEEEECCCHHHHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA