| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB2 [H]
Identifier: 116624051
GI number: 116624051
Start: 6267971
End: 6270325
Strand: Direct
Name: macB2 [H]
Synonym: Acid_4965
Alternate gene names: 116624051
Gene position: 6267971-6270325 (Clockwise)
Preceding gene: 116624050
Following gene: 116624052
Centisome position: 62.9
GC content: 67.13
Gene sequence:
>2355_bases ATGGATCTTCGATTAGGGTTGCGGCTGCTGGTGCGCCGGCCGGCGCTGAGCGCGGGATTGATTCTCACGCTGGCTCTCGG CATCGGCGCAAACGCCTGCGTATTTAGTGTTATCTCCACGGTGCTGCTGCACCCGCTGCCGTTTCGGGAGCCGGAGAGGC TCACCATCCTGTGGGCGCAGGACCGCGCGCACGGCGACCAGCAGGTGGAACTCTCCTATCGCGACTTGACGGAATGGCAG CGTCGCAGCCGGGCGTTCGAAGGCTTCGCGGCGCTCTCTTCGGTGAACCTGGATGTCGCGCTGACCGGTGGCGACCGGCC GCAGCAGATCGAAGGCATGCTGGTTACCGAAGGCTTCTTCGACCTGCTGGGCGCGCATGCAGAATTGGGCCGTACGCCGA CGGCCAGCGACGTGCAATCCGGCGCCGCGCCCGGAGTGATCAGTCATCGCTTGTGGCAATCGCGGTTCGCGGGCGATCGC CAGGTCATCGGACGCACCATCACGGCGGACCACCAGCCCTGCACGGTAGTGGGCGTGATGCCGCCGGACTTCGATTTTCC GCACAATGTGGATCTCTGGTTCCCGGGCAACGCGGCCGACCTGAGCCGCAACGCCACCATCCGCGTTTATCGCGTGATGG GCCGACTGCGCGCTGGCCGGACGCTCGCGCAAGGGCGTGCCGAAATGCAGGGCATCGCCGCTGCTTTGGAGCGCGAGTAT CCGGAACAGAATCGCGGGCTGGGCGTGAGGGCGGATTCGCTCGAGGACGCCGTTTTCGGCAAGGCGCGTCCGGCCCTTTG GGCGTTGATGGCGGCGGTGATGCTGCTGCTGTTTACGGCGTGCGCGAACGCCGGCAGCCTGCTGTTGAGCCGCGTGATCG CGCGGGAGCCGGAGATGCGGCTGCGAGCCGCGCTCGGGGCGAGCCGCGACCGCGTGCTGCGGCAGATGCTGGCCGAGGGC CTGCCGATCGGGATACTGGGCGGGGCGGCCGGGCTGCTGCTGGCGCGTTATGGCGTGGCGGCACTCACGGTGCTGGCGCC GCGCGAAATCCCGCGCATCGCGGAGGCACACGTCAGTGGTGAGGTGCTGCTCTACACGGGGCTGCTCTCACTTGCCACGG TACTGCTATTCATGTGGCCGGCGGCGCTGTACGCGTCACGCATAGGTCCGCTCGGAAGGACTGCGGTCCGCCGTCGCACG CGCGGACTGTTCGTGAGCGCGCAAGTTGCGGTTTCCGTGATGCTGATCGCGGGCGCGATCACATTGGCGCAGGGATTCCG AGAATTGAACAGGATCGATCCCGGCTTCCGCCGCGACCACATCGTGACCTTCCGCATCCCCCTCTCGCGCCCGGAATACG CAAAGCAGGAGCCGCGCAAGCAGTTCTATGAGGCCTTGCTCAGCAACCTGCGCGCGATTCGTGGAACGCAATCGGCCGCG GCGATCCTGTTGCGGCCGCTCTCCGGCAATGTGGGCTGGGACACGCCTTTCACGGTGGAAGGCCAGGGGGACGCGGAGCA GGCCGCGAACCCCGATGCGAACTACGAGGCGATCAGCCCCGACTATTTCCGCACGATGCGGATTCCGATGGCGGCGGGCC GCGATTTCGGAGCGGACGATCGTGCCGGCAGCGCTCCCGTAGCGATTGTCAGCGCGGATTTGGCGCGTCGTTATTGGCCG GCAGGATCCGCTCCGGGCAAGCGCATCAAACTCGCGCGGCCGAATGGCAAGCAGCCGTGGCTGACGGTGGTCGGGGTCGC AGGAGACGTGCGTTATCGCGAATGGGAGAATGCGCGCTACGACATCTACATCCCGGTGCAGCAGCGAGCGCAGCATCGCA GCGATTTCGTGATCCGGACCGCGCAGCCGCCGCTGACAATGGCACGGGAGATCGAACGCGCGGTGCAGGCGATCGATAAG GATCAACCGGTGAGCTCGCTGACCACGGTGGATTCGCTGGTGGATGAGACCTTCGCGCTGCCGCGCTTCAATCTCACGCT GGTGGGCCTCTTCTCATTTTTCGCGCTGGGGCTCGCGATGGCCGGCGTCTTCGCGCAGGTTATGCACGCGGTGACGGAGC GCACGCACGAGATCGGTATTCGGATGGCGCTCGGCGCACAGCGGGGTGACGTAGTGCGGATGGTGCTACGCGAGGGAGTG ATGGCGGCGGCCGCGGGAATCGCGATTGGCGCATTGGGCAAGGCGGCGGCGGGTTTCGCGAGCGGTATGCGGGTGGGCGT AGCCGCGGTGCTGCCGGCGGCCGCGATTGTAATGGTGGTGGCAGCGTGCGCTAGCGTGCTGCCGGCGCGGCGGGCCAGCG GCGTGGAAGCCGCCGCTGCGTTGCGCGGCGAGTAA
Upstream 100 bases:
>100_bases GGTCATAAGTCCGACGTCGCGGTAGAGGGCGGTCCGATTGATTTGCGGGAAAGCCGCCTGAAAGGCGGCTGCAGCCAGGA TTGGCTGCCCCACTGATCAA
Downstream 100 bases:
>100_bases GTGCTATGATTCCCGAATAAGGATGCTGGGCAAGTTCACTCATGTAAACTGGGCGCGCGCCATTATGGCCGCGATTCTTT CCCTGCTCCTTACCCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MDLRLGLRLLVRRPALSAGLILTLALGIGANACVFSVISTVLLHPLPFREPERLTILWAQDRAHGDQQVELSYRDLTEWQ RRSRAFEGFAALSSVNLDVALTGGDRPQQIEGMLVTEGFFDLLGAHAELGRTPTASDVQSGAAPGVISHRLWQSRFAGDR QVIGRTITADHQPCTVVGVMPPDFDFPHNVDLWFPGNAADLSRNATIRVYRVMGRLRAGRTLAQGRAEMQGIAAALEREY PEQNRGLGVRADSLEDAVFGKARPALWALMAAVMLLLFTACANAGSLLLSRVIAREPEMRLRAALGASRDRVLRQMLAEG LPIGILGGAAGLLLARYGVAALTVLAPREIPRIAEAHVSGEVLLYTGLLSLATVLLFMWPAALYASRIGPLGRTAVRRRT RGLFVSAQVAVSVMLIAGAITLAQGFRELNRIDPGFRRDHIVTFRIPLSRPEYAKQEPRKQFYEALLSNLRAIRGTQSAA AILLRPLSGNVGWDTPFTVEGQGDAEQAANPDANYEAISPDYFRTMRIPMAAGRDFGADDRAGSAPVAIVSADLARRYWP AGSAPGKRIKLARPNGKQPWLTVVGVAGDVRYREWENARYDIYIPVQQRAQHRSDFVIRTAQPPLTMAREIERAVQAIDK DQPVSSLTTVDSLVDETFALPRFNLTLVGLFSFFALGLAMAGVFAQVMHAVTERTHEIGIRMALGAQRGDVVRMVLREGV MAAAAGIAIGALGKAAAGFASGMRVGVAAVLPAAAIVMVVAACASVLPARRASGVEAAAALRGE
Sequences:
>Translated_784_residues MDLRLGLRLLVRRPALSAGLILTLALGIGANACVFSVISTVLLHPLPFREPERLTILWAQDRAHGDQQVELSYRDLTEWQ RRSRAFEGFAALSSVNLDVALTGGDRPQQIEGMLVTEGFFDLLGAHAELGRTPTASDVQSGAAPGVISHRLWQSRFAGDR QVIGRTITADHQPCTVVGVMPPDFDFPHNVDLWFPGNAADLSRNATIRVYRVMGRLRAGRTLAQGRAEMQGIAAALEREY PEQNRGLGVRADSLEDAVFGKARPALWALMAAVMLLLFTACANAGSLLLSRVIAREPEMRLRAALGASRDRVLRQMLAEG LPIGILGGAAGLLLARYGVAALTVLAPREIPRIAEAHVSGEVLLYTGLLSLATVLLFMWPAALYASRIGPLGRTAVRRRT RGLFVSAQVAVSVMLIAGAITLAQGFRELNRIDPGFRRDHIVTFRIPLSRPEYAKQEPRKQFYEALLSNLRAIRGTQSAA AILLRPLSGNVGWDTPFTVEGQGDAEQAANPDANYEAISPDYFRTMRIPMAAGRDFGADDRAGSAPVAIVSADLARRYWP AGSAPGKRIKLARPNGKQPWLTVVGVAGDVRYREWENARYDIYIPVQQRAQHRSDFVIRTAQPPLTMAREIERAVQAIDK DQPVSSLTTVDSLVDETFALPRFNLTLVGLFSFFALGLAMAGVFAQVMHAVTERTHEIGIRMALGAQRGDVVRMVLREGV MAAAAGIAIGALGKAAAGFASGMRVGVAAVLPAAAIVMVVAACASVLPARRASGVEAAAALRGE >Mature_784_residues MDLRLGLRLLVRRPALSAGLILTLALGIGANACVFSVISTVLLHPLPFREPERLTILWAQDRAHGDQQVELSYRDLTEWQ RRSRAFEGFAALSSVNLDVALTGGDRPQQIEGMLVTEGFFDLLGAHAELGRTPTASDVQSGAAPGVISHRLWQSRFAGDR QVIGRTITADHQPCTVVGVMPPDFDFPHNVDLWFPGNAADLSRNATIRVYRVMGRLRAGRTLAQGRAEMQGIAAALEREY PEQNRGLGVRADSLEDAVFGKARPALWALMAAVMLLLFTACANAGSLLLSRVIAREPEMRLRAALGASRDRVLRQMLAEG LPIGILGGAAGLLLARYGVAALTVLAPREIPRIAEAHVSGEVLLYTGLLSLATVLLFMWPAALYASRIGPLGRTAVRRRT RGLFVSAQVAVSVMLIAGAITLAQGFRELNRIDPGFRRDHIVTFRIPLSRPEYAKQEPRKQFYEALLSNLRAIRGTQSAA AILLRPLSGNVGWDTPFTVEGQGDAEQAANPDANYEAISPDYFRTMRIPMAAGRDFGADDRAGSAPVAIVSADLARRYWP AGSAPGKRIKLARPNGKQPWLTVVGVAGDVRYREWENARYDIYIPVQQRAQHRSDFVIRTAQPPLTMAREIERAVQAIDK DQPVSSLTTVDSLVDETFALPRFNLTLVGLFSFFALGLAMAGVFAQVMHAVTERTHEIGIRMALGAQRGDVVRMVLREGV MAAAAGIAIGALGKAAAGFASGMRVGVAAVLPAAAIVMVVAACASVLPARRASGVEAAAALRGE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=298, Percent_Identity=26.1744966442953, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 84544; Mature: 84544
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRLGLRLLVRRPALSAGLILTLALGIGANACVFSVISTVLLHPLPFREPERLTILWAQ CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DRAHGDQQVELSYRDLTEWQRRSRAFEGFAALSSVNLDVALTGGDRPQQIEGMLVTEGFF CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHCCEEEEHHHH DLLGAHAELGRTPTASDVQSGAAPGVISHRLWQSRFAGDRQVIGRTITADHQPCTVVGVM HHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCEEECCCCCEEEEEEC PPDFDFPHNVDLWFPGNAADLSRNATIRVYRVMGRLRAGRTLAQGRAEMQGIAAALEREY CCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC PEQNRGLGVRADSLEDAVFGKARPALWALMAAVMLLLFTACANAGSLLLSRVIAREPEMR CHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH LRAALGASRDRVLRQMLAEGLPIGILGGAAGLLLARYGVAALTVLAPREIPRIAEAHVSG HHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHCCC EVLLYTGLLSLATVLLFMWPAALYASRIGPLGRTAVRRRTRGLFVSAQVAVSVMLIAGAI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHH TLAQGFRELNRIDPGFRRDHIVTFRIPLSRPEYAKQEPRKQFYEALLSNLRAIRGTQSAA HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AILLRPLSGNVGWDTPFTVEGQGDAEQAANPDANYEAISPDYFRTMRIPMAAGRDFGADD HHEEEECCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCHHHHHEECCHHCCCCCCCCC RAGSAPVAIVSADLARRYWPAGSAPGKRIKLARPNGKQPWLTVVGVAGDVRYREWENARY CCCCCCEEEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEHHCCCCEE DIYIPVQQRAQHRSDFVIRTAQPPLTMAREIERAVQAIDKDQPVSSLTTVDSLVDETFAL EEEEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC PRFNLTLVGLFSFFALGLAMAGVFAQVMHAVTERTHEIGIRMALGAQRGDVVRMVLREGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHH MAAAAGIAIGALGKAAAGFASGMRVGVAAVLPAAAIVMVVAACASVLPARRASGVEAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LRGE HCCC >Mature Secondary Structure MDLRLGLRLLVRRPALSAGLILTLALGIGANACVFSVISTVLLHPLPFREPERLTILWAQ CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DRAHGDQQVELSYRDLTEWQRRSRAFEGFAALSSVNLDVALTGGDRPQQIEGMLVTEGFF CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHCCEEEEHHHH DLLGAHAELGRTPTASDVQSGAAPGVISHRLWQSRFAGDRQVIGRTITADHQPCTVVGVM HHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCEEECCCCCEEEEEEC PPDFDFPHNVDLWFPGNAADLSRNATIRVYRVMGRLRAGRTLAQGRAEMQGIAAALEREY CCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC PEQNRGLGVRADSLEDAVFGKARPALWALMAAVMLLLFTACANAGSLLLSRVIAREPEMR CHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH LRAALGASRDRVLRQMLAEGLPIGILGGAAGLLLARYGVAALTVLAPREIPRIAEAHVSG HHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHCCC EVLLYTGLLSLATVLLFMWPAALYASRIGPLGRTAVRRRTRGLFVSAQVAVSVMLIAGAI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHH TLAQGFRELNRIDPGFRRDHIVTFRIPLSRPEYAKQEPRKQFYEALLSNLRAIRGTQSAA HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AILLRPLSGNVGWDTPFTVEGQGDAEQAANPDANYEAISPDYFRTMRIPMAAGRDFGADD HHEEEECCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCHHHHHEECCHHCCCCCCCCC RAGSAPVAIVSADLARRYWPAGSAPGKRIKLARPNGKQPWLTVVGVAGDVRYREWENARY CCCCCCEEEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEHHCCCCEE DIYIPVQQRAQHRSDFVIRTAQPPLTMAREIERAVQAIDKDQPVSSLTTVDSLVDETFAL EEEEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC PRFNLTLVGLFSFFALGLAMAGVFAQVMHAVTERTHEIGIRMALGAQRGDVVRMVLREGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHH MAAAAGIAIGALGKAAAGFASGMRVGVAAVLPAAAIVMVVAACASVLPARRASGVEAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LRGE HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]