| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is bcp [H]
Identifier: 116624029
GI number: 116624029
Start: 6238597
End: 6239052
Strand: Direct
Name: bcp [H]
Synonym: Acid_4941
Alternate gene names: 116624029
Gene position: 6238597-6239052 (Clockwise)
Preceding gene: 116624028
Following gene: 116624030
Centisome position: 62.6
GC content: 63.38
Gene sequence:
>456_bases ATGCTCTCCTGGCTCTTTTCCGACCCTCTCCCGGTGGGTACCGCCGCCCCCGATTTCACGGCGCTCGACGATGGCGGCCG CACCGTCACTCTCTCCAAGCTCCGCGGCCGCAACGTGGTCCTGGTCTTCTACCCCGCCGACGATACCCCCGGTTGCACCA AGCAACTCTGCCAGTTCCGCGACGATTGGAGCCAGGCCACCGCCCGCAACGTGGCGGTCTATGGCGTCAATCCCCAAAGC GCCGGTCACCACCAGAAGTTCCGCAAGAAGTTCAGCTTCCCCTTCCCGTTGCTGGTCGATGCCAACCAGAAAATCGCGCA GCTTTATCACGCGCACGGCCTGATCGTGAAGCGCACCGTCTACCTGATCGGCCCCGACGGAACGGTCCTCTTCTCGCAAC GCGGCATGCCTTCACCCGCCGAAGTGTTAGCCTCCGCGCACATTGGGGTATCATAG
Upstream 100 bases:
>100_bases TCAACGTGCAGCTACCGCCGGGCCTGGTTCGCGGCGCGATGCCGGTCACCATCACCAGCGGTCAGAAGTACAGCAACGCA TATCAATTTACGGTGCAATA
Downstream 100 bases:
>100_bases GCAATTCAACTTTTAATGAAGCTCCCCAGGGTCTACCCGATCCTCGACACGGAATCGCTTGATCGGCGCGGCATCTTACT GGAAACCGCGGCCGCATCCT
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MLSWLFSDPLPVGTAAPDFTALDDGGRTVTLSKLRGRNVVLVFYPADDTPGCTKQLCQFRDDWSQATARNVAVYGVNPQS AGHHQKFRKKFSFPFPLLVDANQKIAQLYHAHGLIVKRTVYLIGPDGTVLFSQRGMPSPAEVLASAHIGVS
Sequences:
>Translated_151_residues MLSWLFSDPLPVGTAAPDFTALDDGGRTVTLSKLRGRNVVLVFYPADDTPGCTKQLCQFRDDWSQATARNVAVYGVNPQS AGHHQKFRKKFSFPFPLLVDANQKIAQLYHAHGLIVKRTVYLIGPDGTVLFSQRGMPSPAEVLASAHIGVS >Mature_151_residues MLSWLFSDPLPVGTAAPDFTALDDGGRTVTLSKLRGRNVVLVFYPADDTPGCTKQLCQFRDDWSQATARNVAVYGVNPQS AGHHQKFRKKFSFPFPLLVDANQKIAQLYHAHGLIVKRTVYLIGPDGTVLFSQRGMPSPAEVLASAHIGVS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=131, Percent_Identity=29.7709923664122, Blast_Score=70, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322180, Length=130, Percent_Identity=31.5384615384615, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16497; Mature: 16497
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSWLFSDPLPVGTAAPDFTALDDGGRTVTLSKLRGRNVVLVFYPADDTPGCTKQLCQFR CCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH DDWSQATARNVAVYGVNPQSAGHHQKFRKKFSFPFPLLVDANQKIAQLYHAHGLIVKRTV HHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCEEEEEEE YLIGPDGTVLFSQRGMPSPAEVLASAHIGVS EEECCCCEEEEECCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MLSWLFSDPLPVGTAAPDFTALDDGGRTVTLSKLRGRNVVLVFYPADDTPGCTKQLCQFR CCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH DDWSQATARNVAVYGVNPQSAGHHQKFRKKFSFPFPLLVDANQKIAQLYHAHGLIVKRTV HHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCEEEEEEE YLIGPDGTVLFSQRGMPSPAEVLASAHIGVS EEECCCCEEEEECCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]