| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is steT [H]
Identifier: 116624002
GI number: 116624002
Start: 6201094
End: 6202434
Strand: Reverse
Name: steT [H]
Synonym: Acid_4914
Alternate gene names: 116624002
Gene position: 6202434-6201094 (Counterclockwise)
Preceding gene: 116624003
Following gene: 116624001
Centisome position: 62.24
GC content: 61.74
Gene sequence:
>1341_bases ATGGCGGAAAAACAGATCGGCGACGAAGGGCTGGTGCGGGGCTTTGGCCTGCTCCATGCCACCGCGCTCAACATGAGCAA CATGGTGGGCGTGGGACCGTTCATCACGATCCCGCTGATCATCGCCTCGATGGGCGGACCTCAATGCATGTTGGGCTGGC TCTTGGGCGCCGTCCTCGCGCTTTGCGACGGGCTGGTCTGGAGCGAACTGGCGGCGGCGATGCCCGGGACCGGCGGCACC TACCTCTACCTGCGCGAGGCCTTCCGCAAGACTCGCCTGGGCGGCATCCTCCCATTTCTCTTCATCTGGCAATTCATCAT CAGCGGCCCTTTGGAAATCGCTTCCGGCTACATCGGCTTCGCGCAGTACGTCGGCTACTTCTGGCGCGGCATGGGTCCGT GGGAGACCCGGCTGCTCAGCCTGTCTGTCGGAACAGTGGTAATCGTGCTGCTCTATCGCAGGGTGACGGCGGTGGCGAAG ATGGCCGTAGTGCTGTGGATCGGCATGCTGGCGACGGTGCTGTGGATCGTGGTCAGCGGCCTCGCCAACTTCAATGCGCG CGTGGTCTTCGATTTTCCTCCGGGCGCCTTCACTTTCTCGCGCGGTTTCCTGGCGGGGCTAGGCTCGGCGATGCTGATCG CGATGTACGATTTCATGGGCTACTACGACATCTGCTACGTCGGCGGAGAAGTCCGCAATCCGGCACGCGTGATTCCGCGG TCCATCATTTATTCGGTGCTCGCGGTGGCGGCGATCTACGCGCTGATGAATTTGAGCATCATCGCGGTGGTGCCGTGGCG GGAAGCGATGAATTCGAAGTTCATCGCGGCGCAGTTCATTGAAAAGCTGTACGGCACTCGCGCAGCCGCCGTGGTGACGG TGCTGGTGTTGTGGACGGCATTCGCATCGGTCTTCGCGCTGCTGCTCGGCTACAGCCGCATTCCTTATGCGGCGGCGGTC AACGGAGATTTCTTCGCCGTCTTCGGCCGGCTGCACGCGACCGGAAAATTCCCGCACGTCTCGTTGCTCGTGATGGGCGC GCTCTCGATTGTCGCGTCGCTGTGGAACCTGGACGCGGTGATTTCGGCGCTACTGACTTCGCGCATCCTGATTCAGTTCG TCGCGCAGATCTTCGCATTGCACTATCTCCGCCGGCACCGCCACGATATCGAGCGGCCCTTTCGTGCATGGCTGTACCCT TTGCCCAGCGTGATCGCATTCGCGGGCTGGGCCTACATCTTCCTGACATCGGGTTGGAACTTCGCGGGCTTCGGAGTCTT GACGCTGGCTGCGGGGGTTGGTGCTTACTTGCTGTGGCGAAAGGTGACAAAATACTCCTGA
Upstream 100 bases:
>100_bases GCGCTGATTGCGTGGCTGGCCGCGAACGCCACGCGCTAAAGAACCGCGACCGTCAAGGAGCGTTCTCCTAATTGATTTAC CATGTACGCTGACGGCGTTC
Downstream 100 bases:
>100_bases ATGCTCAAACTCATTGCTGCTTGTGCGCTGGCTGCATGCGCCGCACTTGCTCAAGATCTCGCCGCGCCGAGGCTCGTCAC GCTGAATCTGACCGCGACCG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MAEKQIGDEGLVRGFGLLHATALNMSNMVGVGPFITIPLIIASMGGPQCMLGWLLGAVLALCDGLVWSELAAAMPGTGGT YLYLREAFRKTRLGGILPFLFIWQFIISGPLEIASGYIGFAQYVGYFWRGMGPWETRLLSLSVGTVVIVLLYRRVTAVAK MAVVLWIGMLATVLWIVVSGLANFNARVVFDFPPGAFTFSRGFLAGLGSAMLIAMYDFMGYYDICYVGGEVRNPARVIPR SIIYSVLAVAAIYALMNLSIIAVVPWREAMNSKFIAAQFIEKLYGTRAAAVVTVLVLWTAFASVFALLLGYSRIPYAAAV NGDFFAVFGRLHATGKFPHVSLLVMGALSIVASLWNLDAVISALLTSRILIQFVAQIFALHYLRRHRHDIERPFRAWLYP LPSVIAFAGWAYIFLTSGWNFAGFGVLTLAAGVGAYLLWRKVTKYS
Sequences:
>Translated_446_residues MAEKQIGDEGLVRGFGLLHATALNMSNMVGVGPFITIPLIIASMGGPQCMLGWLLGAVLALCDGLVWSELAAAMPGTGGT YLYLREAFRKTRLGGILPFLFIWQFIISGPLEIASGYIGFAQYVGYFWRGMGPWETRLLSLSVGTVVIVLLYRRVTAVAK MAVVLWIGMLATVLWIVVSGLANFNARVVFDFPPGAFTFSRGFLAGLGSAMLIAMYDFMGYYDICYVGGEVRNPARVIPR SIIYSVLAVAAIYALMNLSIIAVVPWREAMNSKFIAAQFIEKLYGTRAAAVVTVLVLWTAFASVFALLLGYSRIPYAAAV NGDFFAVFGRLHATGKFPHVSLLVMGALSIVASLWNLDAVISALLTSRILIQFVAQIFALHYLRRHRHDIERPFRAWLYP LPSVIAFAGWAYIFLTSGWNFAGFGVLTLAAGVGAYLLWRKVTKYS >Mature_445_residues AEKQIGDEGLVRGFGLLHATALNMSNMVGVGPFITIPLIIASMGGPQCMLGWLLGAVLALCDGLVWSELAAAMPGTGGTY LYLREAFRKTRLGGILPFLFIWQFIISGPLEIASGYIGFAQYVGYFWRGMGPWETRLLSLSVGTVVIVLLYRRVTAVAKM AVVLWIGMLATVLWIVVSGLANFNARVVFDFPPGAFTFSRGFLAGLGSAMLIAMYDFMGYYDICYVGGEVRNPARVIPRS IIYSVLAVAAIYALMNLSIIAVVPWREAMNSKFIAAQFIEKLYGTRAAAVVTVLVLWTAFASVFALLLGYSRIPYAAAVN GDFFAVFGRLHATGKFPHVSLLVMGALSIVASLWNLDAVISALLTSRILIQFVAQIFALHYLRRHRHDIERPFRAWLYPL PSVIAFAGWAYIFLTSGWNFAGFGVLTLAAGVGAYLLWRKVTKYS
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI7657683, Length=400, Percent_Identity=27.5, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI187423910, Length=414, Percent_Identity=24.1545893719807, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI7657591, Length=414, Percent_Identity=24.1545893719807, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI33286428, Length=467, Percent_Identity=23.982869379015, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI186910308, Length=349, Percent_Identity=24.9283667621776, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI186910306, Length=349, Percent_Identity=24.9283667621776, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI186910304, Length=349, Percent_Identity=24.9283667621776, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI9790235, Length=312, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI115648063, Length=346, Percent_Identity=21.9653179190751, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI115648022, Length=346, Percent_Identity=21.9653179190751, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI71999149, Length=430, Percent_Identity=23.953488372093, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI110347453, Length=369, Percent_Identity=27.10027100271, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI87082250, Length=452, Percent_Identity=23.4513274336283, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32566699, Length=361, Percent_Identity=26.8698060941828, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17540018, Length=416, Percent_Identity=22.5961538461538, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568033, Length=447, Percent_Identity=24.1610738255034, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193208714, Length=418, Percent_Identity=25.5980861244019, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32566695, Length=418, Percent_Identity=25.5980861244019, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71993915, Length=373, Percent_Identity=24.1286863270777, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71982612, Length=402, Percent_Identity=25.6218905472637, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71982608, Length=402, Percent_Identity=25.6218905472637, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71995382, Length=377, Percent_Identity=23.342175066313, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71995388, Length=377, Percent_Identity=23.342175066313, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321492, Length=322, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357367, Length=460, Percent_Identity=25.8695652173913, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI45550968, Length=404, Percent_Identity=25.4950495049505, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI19921172, Length=404, Percent_Identity=25.4950495049505, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24641993, Length=399, Percent_Identity=25.062656641604, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24641995, Length=399, Percent_Identity=25.062656641604, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI221331183, Length=401, Percent_Identity=24.9376558603491, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI17647653, Length=401, Percent_Identity=24.9376558603491, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24664379, Length=401, Percent_Identity=24.9376558603491, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24651635, Length=436, Percent_Identity=21.3302752293578, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24651633, Length=436, Percent_Identity=21.3302752293578, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24666159, Length=424, Percent_Identity=20.9905660377358, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI221512776, Length=424, Percent_Identity=20.9905660377358, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24667468, Length=366, Percent_Identity=20.7650273224044, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 48828; Mature: 48696
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKQIGDEGLVRGFGLLHATALNMSNMVGVGPFITIPLIIASMGGPQCMLGWLLGAVLA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH LCDGLVWSELAAAMPGTGGTYLYLREAFRKTRLGGILPFLFIWQFIISGPLEIASGYIGF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AQYVGYFWRGMGPWETRLLSLSVGTVVIVLLYRRVTAVAKMAVVLWIGMLATVLWIVVSG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANFNARVVFDFPPGAFTFSRGFLAGLGSAMLIAMYDFMGYYDICYVGGEVRNPARVIPR HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH SIIYSVLAVAAIYALMNLSIIAVVPWREAMNSKFIAAQFIEKLYGTRAAAVVTVLVLWTA HHHHHHHHHHHHHHHHCCHHEEEECCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH FASVFALLLGYSRIPYAAAVNGDFFAVFGRLHATGKFPHVSLLVMGALSIVASLWNLDAV HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ISALLTSRILIQFVAQIFALHYLRRHRHDIERPFRAWLYPLPSVIAFAGWAYIFLTSGWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCC FAGFGVLTLAAGVGAYLLWRKVTKYS CHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEKQIGDEGLVRGFGLLHATALNMSNMVGVGPFITIPLIIASMGGPQCMLGWLLGAVLA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH LCDGLVWSELAAAMPGTGGTYLYLREAFRKTRLGGILPFLFIWQFIISGPLEIASGYIGF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AQYVGYFWRGMGPWETRLLSLSVGTVVIVLLYRRVTAVAKMAVVLWIGMLATVLWIVVSG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANFNARVVFDFPPGAFTFSRGFLAGLGSAMLIAMYDFMGYYDICYVGGEVRNPARVIPR HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH SIIYSVLAVAAIYALMNLSIIAVVPWREAMNSKFIAAQFIEKLYGTRAAAVVTVLVLWTA HHHHHHHHHHHHHHHHCCHHEEEECCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH FASVFALLLGYSRIPYAAAVNGDFFAVFGRLHATGKFPHVSLLVMGALSIVASLWNLDAV HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ISALLTSRILIQFVAQIFALHYLRRHRHDIERPFRAWLYPLPSVIAFAGWAYIFLTSGWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCC FAGFGVLTLAAGVGAYLLWRKVTKYS CHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]