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The map label for this gene is 116623987

Identifier: 116623987

GI number: 116623987

Start: 6180508

End: 6181224

Strand: Direct

Name: 116623987

Synonym: Acid_4899

Alternate gene names: NA

Gene position: 6180508-6181224 (Clockwise)

Preceding gene: 116623986

Following gene: 116623988

Centisome position: 62.02

GC content: 65.13

Gene sequence:

>717_bases
GTGCGGCCCATAGCACTCGCATTATTGCTGGGCAGGCTCTGCCTCGCGGCGCACGCCGCCGGCACAATTGCCTGTCACCT
GGAATCCGCGAGCCCGCTCTCCCGCTTCAAGACCGGTCAACTCGCGTTGCTGGAGAAACTGAACCACGCCGATCGCCCGC
ACCTGGCGAGGCTGAGCCGCATCCTCGTCCCCAACCGGTGGGATCCCGACGAACTCCACTACAGCCCCATGCCGCGGGAG
GTGCCGGAGTTATCAGACCGCAATAAGGCCCTCATCGTGGACTTGGCCGCGCAGGTCTTCGGCGCCTACGAAAGTGGACG
TCTGGTTCGCTGGGGCCCCGTGAGCACGGGCGACCGGCGCCATCAGACACCCTCTGGGACCTATCACCTGAACTGGCACG
CCCGCGTGCGTGTCAGCTCGGAAAACCCCACGTGGATCATGCCCTGGTATTTCAACTTCTCCAGCGATCGCGGACTCGGC
CTCCACCAGTACGCCCTCCCCGGGCGTCCGGCGAGCCACGGCTGTACCCGCTTGCTGGCCACGGATGCACAGTGGATCTT
CAACTGGGGCGAGGGCTGGTCCACGGACGGCGACACGGGCGAGCCCTCTGAAACGGGAACGCTGGTACTCATCGTGGGGA
AGTACGATTTCAAAGCCCCCCAACCGTGGCTCCAACCGCGATGGTGGTCGCAGGGCGTGAGCCTTTCACTCCCATGA

Upstream 100 bases:

>100_bases
CATGATGAACAGCAACCGCGGCTCCGCCAGCCGTGGCGGTGGCGGTGCCGTCCGCGGCGGTGGACGCCGCCGTTAGCAAC
CAGATCCCGAGGAGAATACC

Downstream 100 bases:

>100_bases
CCTTTCACCCCAAAATCTGAGTCTTTTTCCAAGACCTCCCGGCATCTGAGGTAAAATGGAGTTTCTCCCTCAGAGAAGTC
CGCCCTTGGAGGTCTGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidoglycan L D-Transpeptidase Lipoprotein; Protein Containg Ykud Domain

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MRPIALALLLGRLCLAAHAAGTIACHLESASPLSRFKTGQLALLEKLNHADRPHLARLSRILVPNRWDPDELHYSPMPRE
VPELSDRNKALIVDLAAQVFGAYESGRLVRWGPVSTGDRRHQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLG
LHQYALPGRPASHGCTRLLATDAQWIFNWGEGWSTDGDTGEPSETGTLVLIVGKYDFKAPQPWLQPRWWSQGVSLSLP

Sequences:

>Translated_238_residues
MRPIALALLLGRLCLAAHAAGTIACHLESASPLSRFKTGQLALLEKLNHADRPHLARLSRILVPNRWDPDELHYSPMPRE
VPELSDRNKALIVDLAAQVFGAYESGRLVRWGPVSTGDRRHQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLG
LHQYALPGRPASHGCTRLLATDAQWIFNWGEGWSTDGDTGEPSETGTLVLIVGKYDFKAPQPWLQPRWWSQGVSLSLP
>Mature_238_residues
MRPIALALLLGRLCLAAHAAGTIACHLESASPLSRFKTGQLALLEKLNHADRPHLARLSRILVPNRWDPDELHYSPMPRE
VPELSDRNKALIVDLAAQVFGAYESGRLVRWGPVSTGDRRHQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLG
LHQYALPGRPASHGCTRLLATDAQWIFNWGEGWSTDGDTGEPSETGTLVLIVGKYDFKAPQPWLQPRWWSQGVSLSLP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26673; Mature: 26673

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPIALALLLGRLCLAAHAAGTIACHLESASPLSRFKTGQLALLEKLNHADRPHLARLSR
CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHH
ILVPNRWDPDELHYSPMPREVPELSDRNKALIVDLAAQVFGAYESGRLVRWGPVSTGDRR
HHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCEEEECCCCCCCCC
HQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLGLHQYALPGRPASHGCTRLLA
CCCCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHH
TDAQWIFNWGEGWSTDGDTGEPSETGTLVLIVGKYDFKAPQPWLQPRWWSQGVSLSLP
CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCEEEECC
>Mature Secondary Structure
MRPIALALLLGRLCLAAHAAGTIACHLESASPLSRFKTGQLALLEKLNHADRPHLARLSR
CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHH
ILVPNRWDPDELHYSPMPREVPELSDRNKALIVDLAAQVFGAYESGRLVRWGPVSTGDRR
HHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCEEEECCCCCCCCC
HQTPSGTYHLNWHARVRVSSENPTWIMPWYFNFSSDRGLGLHQYALPGRPASHGCTRLLA
CCCCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHH
TDAQWIFNWGEGWSTDGDTGEPSETGTLVLIVGKYDFKAPQPWLQPRWWSQGVSLSLP
CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA