| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623984
Identifier: 116623984
GI number: 116623984
Start: 6176877
End: 6178508
Strand: Direct
Name: 116623984
Synonym: Acid_4896
Alternate gene names: NA
Gene position: 6176877-6178508 (Clockwise)
Preceding gene: 116623983
Following gene: 116623986
Centisome position: 61.98
GC content: 60.05
Gene sequence:
>1632_bases ATGACGTTCAGCGGTAAATCTTTATCTTCAGCACTTTTGGTATTCTCGACGGCGTTCTCCGCGCTGTCCATGGCAGAGAC GAATCCGGGCAATCCGGCAGTGTGGACCGCCCCCAGCATGCAGCGCGTGGGAATGACGGACCCGGCGGGCAGTGTTTCCG ACGTGAGCCTTGCGGCGGCTCGCGGCGAGTATGAGTCCTTTCAAATCGTCGCCAATGGCGCGTCCAAAGGACTTGGCAAT GTCAACCTCACCGTCTCCGACTTAGAGGGCCCGGACGGGAAAGTCATCCCGCACGGCAATTTCACCCTCTATCGCGAGAA GTACATGCACGTGACTTCCCCCAGCCCGAATTGGAAAGGCTCCAATCAGCCCATGGGCGCCGGCTGGTATCCCGATGCGC TGATCCCGTTCACCGATCCCGATACCGGCAAGCCGCTCTCCGGCGCCAAAATAAGCGCGGTCCCGTTCGACGTCAAGGCC GGTAACAACCAGCCTGTCTGGGTGGATCTTCTGGTCCCGCAGACGGCCCAGGCCGGAACTTACAAAGGCACTTACACCGT GACCAGCAATGAAGGTACCTTCACCGGCAATATCTCGCTGAAGGTTTGGAATTTCGCCCTGCCCGCGGCCCCCACCCTCA AGACTTCCTTCCTGTTCTTCCAGGCAGGCACCTTGGCTGCGCAGCGCGAACTCCTGCGCAACAAGATTTCACCCCTGTCC ACCAATCCCGCCGATCAGCCGCTGCTCATGAAAGAGCATGGCCTGAGCGCCACTCAAACCGGCCCCTTCAGCGGCGCCGA CGTCGGCCGTTGCGCCATGTCGCCCGCGCCCTCCGTGAGCCAGTTCAAGACCGTGGCGGCGCAGCAGCAGCCCGGCTTGC TCCTCTACGATTACAGCGCCGATGAAATCGGCCATTGCACCCAGCTCTATCCCACCATTCGCCAGTGGGCGAACAACATG CACCAGGCCGGAATCAAGAACCTGATCTCCATGTCCCCGACTCCCGCCTTGTACAACGATGGCTCCGGCACCGGCCGCTC CGCCGTCGATATCTGGGTTCTCCTGCCCGTCATGTACAACAACTCCAAAACCCAGGTTGGCGAGGTTCTGAAGAAAGGCG ATTCCGTCTGGTCCTACAACACCCTCGTGCAGGACGCCTATTCTCCCAAGTGGCTGATCGATTTCAGCCCGGTTGACTTC CGCATCCAGCCCGGCTTTATCAGCCAGAGCCTCAACCTCACCGGCATGCTGTACTGGCGCGTTGATAAGTGGCCCTCAAA TGCCTGGGACAATGTGAACAATGCCGGTACTTACAGCTCGTCCAATTATCCTGGCGAAGGCATGCTCGTCTATCCGGGCG GACCGGTCGGCGTCAAGGGTGTTGTCGCGTCAATGCGCATGAAGTGGCTGCGCGACGGCGTCGAAGACTACGACTACGTG CAGATCCTCAAGGACCTCGGAAAGGGTGACATGGCGATGCAGATCTCTCGTTCCGTCGGTCCCGATTGGACCAATTGGAC GCGTGACTCCAAGGCTATCGAGAATGCCCGCCTGAAACTCGGCGAGGCAATCGATCAGATCATGAACACCACTCCTACGA CGGCCACCGGCACCCGCGCCGCCGGCAACTAA
Upstream 100 bases:
>100_bases CGCTCTGGCGCCTGATCTTCGCCCCGGAACTACCACACGAGAAGTGTGCCCCGGCGCGGCCGATGGTCGCAACGGGCAGT TTTACGAGAGGTATCCCTTC
Downstream 100 bases:
>100_bases GCACGCACACGGCCTTCCTGTAGGGCCGTTGTTATGCTCGATGCCCCTGTAACGAGGAAGATTTATTTTCGCGCGATGCG GAGGCGGCGCCCTGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTFSGKSLSSALLVFSTAFSALSMAETNPGNPAVWTAPSMQRVGMTDPAGSVSDVSLAAARGEYESFQIVANGASKGLGN VNLTVSDLEGPDGKVIPHGNFTLYREKYMHVTSPSPNWKGSNQPMGAGWYPDALIPFTDPDTGKPLSGAKISAVPFDVKA GNNQPVWVDLLVPQTAQAGTYKGTYTVTSNEGTFTGNISLKVWNFALPAAPTLKTSFLFFQAGTLAAQRELLRNKISPLS TNPADQPLLMKEHGLSATQTGPFSGADVGRCAMSPAPSVSQFKTVAAQQQPGLLLYDYSADEIGHCTQLYPTIRQWANNM HQAGIKNLISMSPTPALYNDGSGTGRSAVDIWVLLPVMYNNSKTQVGEVLKKGDSVWSYNTLVQDAYSPKWLIDFSPVDF RIQPGFISQSLNLTGMLYWRVDKWPSNAWDNVNNAGTYSSSNYPGEGMLVYPGGPVGVKGVVASMRMKWLRDGVEDYDYV QILKDLGKGDMAMQISRSVGPDWTNWTRDSKAIENARLKLGEAIDQIMNTTPTTATGTRAAGN
Sequences:
>Translated_543_residues MTFSGKSLSSALLVFSTAFSALSMAETNPGNPAVWTAPSMQRVGMTDPAGSVSDVSLAAARGEYESFQIVANGASKGLGN VNLTVSDLEGPDGKVIPHGNFTLYREKYMHVTSPSPNWKGSNQPMGAGWYPDALIPFTDPDTGKPLSGAKISAVPFDVKA GNNQPVWVDLLVPQTAQAGTYKGTYTVTSNEGTFTGNISLKVWNFALPAAPTLKTSFLFFQAGTLAAQRELLRNKISPLS TNPADQPLLMKEHGLSATQTGPFSGADVGRCAMSPAPSVSQFKTVAAQQQPGLLLYDYSADEIGHCTQLYPTIRQWANNM HQAGIKNLISMSPTPALYNDGSGTGRSAVDIWVLLPVMYNNSKTQVGEVLKKGDSVWSYNTLVQDAYSPKWLIDFSPVDF RIQPGFISQSLNLTGMLYWRVDKWPSNAWDNVNNAGTYSSSNYPGEGMLVYPGGPVGVKGVVASMRMKWLRDGVEDYDYV QILKDLGKGDMAMQISRSVGPDWTNWTRDSKAIENARLKLGEAIDQIMNTTPTTATGTRAAGN >Mature_542_residues TFSGKSLSSALLVFSTAFSALSMAETNPGNPAVWTAPSMQRVGMTDPAGSVSDVSLAAARGEYESFQIVANGASKGLGNV NLTVSDLEGPDGKVIPHGNFTLYREKYMHVTSPSPNWKGSNQPMGAGWYPDALIPFTDPDTGKPLSGAKISAVPFDVKAG NNQPVWVDLLVPQTAQAGTYKGTYTVTSNEGTFTGNISLKVWNFALPAAPTLKTSFLFFQAGTLAAQRELLRNKISPLST NPADQPLLMKEHGLSATQTGPFSGADVGRCAMSPAPSVSQFKTVAAQQQPGLLLYDYSADEIGHCTQLYPTIRQWANNMH QAGIKNLISMSPTPALYNDGSGTGRSAVDIWVLLPVMYNNSKTQVGEVLKKGDSVWSYNTLVQDAYSPKWLIDFSPVDFR IQPGFISQSLNLTGMLYWRVDKWPSNAWDNVNNAGTYSSSNYPGEGMLVYPGGPVGVKGVVASMRMKWLRDGVEDYDYVQ ILKDLGKGDMAMQISRSVGPDWTNWTRDSKAIENARLKLGEAIDQIMNTTPTTATGTRAAGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58533; Mature: 58401
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSGKSLSSALLVFSTAFSALSMAETNPGNPAVWTAPSMQRVGMTDPAGSVSDVSLAAA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHCCCCCCCCCCCCEEEEHH RGEYESFQIVANGASKGLGNVNLTVSDLEGPDGKVIPHGNFTLYREKYMHVTSPSPNWKG CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEEEEECCCCCCCCC SNQPMGAGWYPDALIPFTDPDTGKPLSGAKISAVPFDVKAGNNQPVWVDLLVPQTAQAGT CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCC YKGTYTVTSNEGTFTGNISLKVWNFALPAAPTLKTSFLFFQAGTLAAQRELLRNKISPLS CCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCC TNPADQPLLMKEHGLSATQTGPFSGADVGRCAMSPAPSVSQFKTVAAQQQPGLLLYDYSA CCCCCCCEEEHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCEEEEECCC DEIGHCTQLYPTIRQWANNMHQAGIKNLISMSPTPALYNDGSGTGRSAVDIWVLLPVMYN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEEEEEC NSKTQVGEVLKKGDSVWSYNTLVQDAYSPKWLIDFSPVDFRIQPGFISQSLNLTGMLYWR CCHHHHHHHHHCCCCEEEHHHHHHHCCCCEEEEEECCCCEEECCCHHCCCCCCEEEEEEE VDKWPSNAWDNVNNAGTYSSSNYPGEGMLVYPGGPVGVKGVVASMRMKWLRDGVEDYDYV EECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHH QILKDLGKGDMAMQISRSVGPDWTNWTRDSKAIENARLKLGEAIDQIMNTTPTTATGTRA HHHHHHCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AGN CCC >Mature Secondary Structure TFSGKSLSSALLVFSTAFSALSMAETNPGNPAVWTAPSMQRVGMTDPAGSVSDVSLAAA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHCCCCCCCCCCCCEEEEHH RGEYESFQIVANGASKGLGNVNLTVSDLEGPDGKVIPHGNFTLYREKYMHVTSPSPNWKG CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEEEEECCCCCCCCC SNQPMGAGWYPDALIPFTDPDTGKPLSGAKISAVPFDVKAGNNQPVWVDLLVPQTAQAGT CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCC YKGTYTVTSNEGTFTGNISLKVWNFALPAAPTLKTSFLFFQAGTLAAQRELLRNKISPLS CCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCC TNPADQPLLMKEHGLSATQTGPFSGADVGRCAMSPAPSVSQFKTVAAQQQPGLLLYDYSA CCCCCCCEEEHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCEEEEECCC DEIGHCTQLYPTIRQWANNMHQAGIKNLISMSPTPALYNDGSGTGRSAVDIWVLLPVMYN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEEEEEC NSKTQVGEVLKKGDSVWSYNTLVQDAYSPKWLIDFSPVDFRIQPGFISQSLNLTGMLYWR CCHHHHHHHHHCCCCEEEHHHHHHHCCCCEEEEEECCCCEEECCCHHCCCCCCEEEEEEE VDKWPSNAWDNVNNAGTYSSSNYPGEGMLVYPGGPVGVKGVVASMRMKWLRDGVEDYDYV EECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHH QILKDLGKGDMAMQISRSVGPDWTNWTRDSKAIENARLKLGEAIDQIMNTTPTTATGTRA HHHHHHCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AGN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA